RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 SRN2Q99176 213 aa2.37□□□□□ -2.03
snR43snR43 CDC36P06100 191 aaPredicted RBP2.36□□□□□ -2.03
snR43snR43 LEU4P06208 619 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 ARD1P07347 238 aaPredicted RBP2.36□□□□□ -2.03
snR43snR43 TY2A-LR1P0C2J4 438 aa2.36□□□□□ -2.03
snR43snR43 TY2A-FP0CX61 438 aa2.36□□□□□ -2.03
snR43snR43 TY2A-GR2P0CX62 438 aa2.36□□□□□ -2.03
snR43snR43 CBF1P17106 351 aa2.36□□□□□ -2.03
snR43snR43 RPB4P20433 221 aaPredicted RBP2.36□□□□□ -2.03
snR43snR43 VPS33P20795 691 aa2.36□□□□□ -2.03
snR43snR43 APN1P22936 367 aa2.36□□□□□ -2.03
snR43snR43 TY2A-CP25383 438 aa2.36□□□□□ -2.03
snR43snR43 DAL3P32459 195 aa2.36□□□□□ -2.03
snR43snR43 GCG1P32656 232 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 NFU1P32860 256 aa2.36□□□□□ -2.03
snR43snR43 CBF5P33322 483 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
snR43snR43 HES1P35843 434 aa2.36□□□□□ -2.03
snR43snR43 DHR2P36009 735 aaPredicted RBP2.36□□□□□ -2.03
snR43snR43 SNU114P36048 1008 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 RRN3P36070 627 aa2.36□□□□□ -2.03
snR43snR43 IFA38P38286 347 aa2.36□□□□□ -2.03
snR43snR43 HRB1P38922 454 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
snR43snR43 YEN1P40028 759 aa2.36□□□□□ -2.03
snR43snR43 GET2P40056 285 aa2.36□□□□□ -2.03
snR43snR43 XBP1P40489 647 aa2.36□□□□□ -2.03
snR43snR43 CAB2P40506 365 aa2.36□□□□□ -2.03
snR43snR43 YIL067CP40514 678 aa2.36□□□□□ -2.03
snR43snR43 PRM2P40534 656 aa2.36□□□□□ -2.03
snR43snR43 PAC11P40960 533 aa2.36□□□□□ -2.03
snR43snR43 PRM10P42946 383 aa2.36□□□□□ -2.03
snR43snR43 SNO3P43544 222 aa2.36□□□□□ -2.03
snR43snR43 NMD5P46970 1048 aa2.36□□□□□ -2.03
snR43snR43 YJL043WP47053 257 aa2.36□□□□□ -2.03
snR43snR43 EMC2P47133 292 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 RAD17P48581 401 aa2.36□□□□□ -2.03
snR43snR43 SDT1P53078 280 aa2.36□□□□□ -2.03
snR43snR43 GPG1P53130 126 aa2.36□□□□□ -2.03
snR43snR43 YGR067CP53243 804 aa2.36□□□□□ -2.03
snR43snR43 CWC22P53333 577 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 YNL058CP53947 316 aa2.36□□□□□ -2.03
snR43snR43 MOT3P54785 490 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 LSM3P57743 89 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 ARG5,6Q01217 863 aa2.36□□□□□ -2.03
snR43snR43 UTP6Q02354 440 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 REC102Q02721 264 aa2.36□□□□□ -2.03
snR43snR43 NHP10Q03435 203 aa2.36□□□□□ -2.03
snR43snR43 TY2A-DR2Q03483 438 aa2.36□□□□□ -2.03
snR43snR43 APC4Q04601 652 aa2.36□□□□□ -2.03
snR43snR43 GLO2Q05584 274 aa2.36□□□□□ -2.03
snR43snR43 PDR8Q06149 701 aa2.36□□□□□ -2.03
snR43snR43 YLR177WQ06251 628 aa2.36□□□□□ -2.03
snR43snR43 MLH3Q12083 715 aa2.36□□□□□ -2.03
snR43snR43 YPL245WQ12179 454 aaKnown RBP2.36□□□□□ -2.03
snR43snR43 TY2A-BQ12260 438 aa2.36□□□□□ -2.03
snR43snR43 TY2A-OR2Q12293 438 aa2.36□□□□□ -2.03
snR43snR43 TY2A-DR1Q12392 438 aa2.36□□□□□ -2.03
snR43snR43 ZRT2Q12436 422 aa2.36□□□□□ -2.03
snR43snR43 TY2A-OR1Q12439 438 aa2.36□□□□□ -2.03
snR43snR43 YPR064WQ12492 139 aa2.36□□□□□ -2.03
snR43snR43 MHT1Q12525 324 aa2.36□□□□□ -2.03
snR43snR43 YMR030W-AQ3E760 96 aa2.36□□□□□ -2.03
snR43snR43 TY2A-DR3Q99303 438 aa2.36□□□□□ -2.03
snR43snR43 FLO9P39712 1322 aa2.36□□□□□ -2.03
snR43snR43 RPS17AP02407 136 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 ARG4P04076 463 aaPredicted RBP2.35□□□□□ -2.03
snR43snR43 GCY1P14065 312 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
snR43snR43 RPS17BP14127 136 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 HEM15P16622 393 aa2.35□□□□□ -2.03
snR43snR43 MAK32P23060 363 aa2.35□□□□□ -2.03
snR43snR43 SEC14P24280 304 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 ERG8P24521 451 aa2.35□□□□□ -2.03
snR43snR43 SLM5P25345 492 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 YIM1P28625 365 aa2.35□□□□□ -2.03
snR43snR43 PAP1P29468 568 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 ATS1P31386 333 aa2.35□□□□□ -2.03
snR43snR43 NUP120P35729 1037 aa2.35□□□□□ -2.03
snR43snR43 CBP4P37267 147 aa2.35□□□□□ -2.03
snR43snR43 MAL32P38158 584 aa2.35□□□□□ -2.03
snR43snR43 BNA4P38169 460 aa2.35□□□□□ -2.03
snR43snR43 TDP1P38319 544 aa2.35□□□□□ -2.03
snR43snR43 YMR262WP38430 313 aa2.35□□□□□ -2.03
snR43snR43 CCT2P39076 527 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 PSA1P41940 361 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 IRC6P43615 237 aa2.35□□□□□ -2.03
snR43snR43 MNN5P46982 586 aa2.35□□□□□ -2.03
snR43snR43 ALB1P47019 175 aaPredicted RBP2.35□□□□□ -2.03
snR43snR43 MPS3P47069 682 aa2.35□□□□□ -2.03
snR43snR43 STE24P47154 453 aa2.35□□□□□ -2.03
snR43snR43 PDR16P53860 351 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 COG6P53959 839 aa2.35□□□□□ -2.03
snR43snR43 NUP116Q02630 1113 aa2.35□□□□□ -2.03
snR43snR43 PFA5Q03289 374 aa2.35□□□□□ -2.03
snR43snR43 CGI121Q03705 181 aaKnown RBP2.35□□□□□ -2.03
snR43snR43 TAF12Q03761 539 aa2.35□□□□□ -2.03
snR43snR43 PLM2Q04383 521 aa2.35□□□□□ -2.03
snR43snR43 GAS2Q06135 555 aa2.35□□□□□ -2.03
snR43snR43 CRN1Q06440 651 aa2.35□□□□□ -2.03
snR43snR43 YLR352WQ06479 807 aa2.35□□□□□ -2.03
snR43snR43 VPS36Q06696 566 aa2.35□□□□□ -2.03
snR43snR43 NMD4Q12129 218 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms