RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	PHA2	P32452	334 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	PFS1	P38872	237 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	HEM14	P40012	539 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	YGL039W	P53183	348 aa	Known RBP	0.74	□□□□□ -2.29
SEC8	YPR055W	COS1	P53822	381 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	STD1	Q02794	444 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	DON1	Q05610	365 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	MFG1	Q07684	458 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	REV3	P14284	1504 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	INO80	P53115	1489 aa		0.74	□□□□□ -2.29
SEC8	YPR055W	DST1	P07273	309 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	RIM1	P32445	135 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	CYS4	P32582	507 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	SPT10	P35208	640 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	ASC1	P38011	319 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	ECM8	P38246	354 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	YHK8	P38776	514 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	GPI16	P38875	610 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	CAK1	P43568	368 aa	Predicted RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	ROG1	P53118	685 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	MTQ1	P53944	314 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	YDR131C	Q03899	556 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	RTN1	Q04947	295 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	PEP1	P32319	1579 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	CDC21	P06785	304 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	SSC1	P0CS90	654 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	MSI1	P13712	422 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	RIP-Chip
SEC8	YPR055W	WSC4	P38739	605 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	PCF11	P39081	626 aa	Predicted RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	COX14	P39103	70 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	YFR057W	P43625	151 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	PIB2	P53191	635 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	RRP46	P53256	223 aa	Predicted RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	MRPS16	Q02608	121 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	GYL1	Q04322	720 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	RRP9	Q06506	573 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	RAX1	Q08760	435 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	HSP42	Q12329	375 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	YCR024C-B	Q3E7Z8	88 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	DOP1	Q03921	1698 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	DNF1	P32660	1571 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	AAT2	P23542	418 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	NFU1	P32860	256 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	PRS1	P32895	427 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	JNM1	P36224	373 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	ZTA1	P38230	334 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	ATG18	P43601	500 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	TOS3	P43637	560 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	AIM24	P47127	394 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	SPR6	Q01684	191 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	RNY1	Q02933	434 aa	Known RBP	0.73	□□□□□ -2.29
SEC8	YPR055W	RMT2	Q03305	412 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	VPS72	Q03388	795 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	TAF12	Q03761	539 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	ECM7	Q06200	448 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	ATG34	Q12292	412 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	SCM3	Q12334	223 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	ISA2	Q12425	185 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	MTR10	Q99189	972 aa		0.73	□□□□□ -2.29
SEC8	YPR055W	SUP35	P05453	685 aa	Known RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	SKN1	P33336	771 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	ATP3	P38077	311 aa	Known RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	TIM17	P39515	158 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	HAC1	P41546	238 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	YGR018C	P53211	109 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	YET2	Q04210	160 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	MDM36	Q06820	579 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	YOR376W	Q08900	122 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	YGK3	Q12222	375 aa	Predicted RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	TPT1	Q12272	230 aa	Known RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	GPM3	Q12326	303 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	EAF3	Q12432	401 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	DNA2	P38859	1522 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	DNF2	Q12675	1612 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	YRF1-1	P0CX20	1796 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	YRF1-5	P0CX21	1796 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	YRF1-8	P0CX22	1796 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	ADH1	P00330	348 aa	Known RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	MPE1	P35728	441 aa	Known RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	PTI1	P39927	425 aa	Predicted RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	MMF1	P40185	145 aa	Known RBP	0.72	□□□□□ -2.29
SEC8	YPR055W	GAT2	P40209	560 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	VHS2	P40463	436 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	DFG10	P40526	253 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	PMT5	P52867	743 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	MMT1	Q03218	510 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	URH1	Q04179	340 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	ASA1	Q06822	443 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	NAG1	Q8TGN9	163 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	BPT1	P14772	1559 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	ULS1	Q08562	1619 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	SIN3	P22579	1536 aa		0.72	□□□□□ -2.29
SEC8	YPR055W	PSK1	P31374	1356 aa		0.71	□□□□□ -2.29
SEC8	YPR055W	POM152	P39685	1337 aa		0.71	□□□□□ -2.29
SEC8	YPR055W	COX4	P04037	155 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	ATP1	P07251	545 aa	Known RBP	0.71	□□□□□ -2.3
SEC8	YPR055W	PDX1	P16451	410 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	CLC1	P17891	233 aa		0.71	□□□□□ -2.3
SEC8	YPR055W	DBF4	P32325	704 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 54 ms