RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W CDC21P06785 304 aa2.45□□□□□ -2.02
UBP16YPL072W SOR1P35497 357 aaKnown RBP2.45□□□□□ -2.02
UBP16YPL072W MLH1P38920 769 aa2.45□□□□□ -2.02
UBP16YPL072W SAS2P40963 338 aa2.45□□□□□ -2.02
UBP16YPL072W ASN2P49090 572 aaKnown RBP2.45□□□□□ -2.02
UBP16YPL072W ROG1P53118 685 aa2.45□□□□□ -2.02
UBP16YPL072W PCP1P53259 346 aa2.45□□□□□ -2.02
UBP16YPL072W PRM1P53835 661 aa2.45□□□□□ -2.02
UBP16YPL072W SPH1Q06160 661 aa2.45□□□□□ -2.02
UBP16YPL072W SOR2Q07786 357 aa2.45□□□□□ -2.02
UBP16YPL072W REX3Q12090 404 aa2.45□□□□□ -2.02
UBP16YPL072W TAL1P15019 335 aaKnown RBP2.44□□□□□ -2.02
UBP16YPL072W ALG1P16661 449 aa2.44□□□□□ -2.02
UBP16YPL072W RAD57P25301 460 aa2.44□□□□□ -2.02
UBP16YPL072W CYS4P32582 507 aaKnown RBP2.44□□□□□ -2.02
UBP16YPL072W YCR041WP37265 110 aa2.44□□□□□ -2.02
UBP16YPL072W YBR056WP38081 501 aa2.44□□□□□ -2.02
UBP16YPL072W ADH5P38113 351 aaKnown RBP2.44□□□□□ -2.02
UBP16YPL072W RIB5P38145 238 aa2.44□□□□□ -2.02
UBP16YPL072W RRP4P38792 359 aaKnown RBP2.44□□□□□ -2.02
UBP16YPL072W MNL1P38888 796 aa2.44□□□□□ -2.02
UBP16YPL072W CCT2P39076 527 aaKnown RBP2.44□□□□□ -2.02
UBP16YPL072W YER079WP40052 210 aaKnown RBP2.44□□□□□ -2.02
UBP16YPL072W PAC11P40960 533 aa2.44□□□□□ -2.02
UBP16YPL072W NCA3P46955 337 aa2.44□□□□□ -2.02
UBP16YPL072W PHO86P46956 311 aa2.44□□□□□ -2.02
UBP16YPL072W RPA34P47006 233 aaPredicted RBP2.44□□□□□ -2.02
UBP16YPL072W MDE1P47095 244 aa2.44□□□□□ -2.02
UBP16YPL072W HMS2P47175 358 aa2.44□□□□□ -2.02
UBP16YPL072W GPI8P49018 411 aa2.44□□□□□ -2.02
UBP16YPL072W YIP5P53108 310 aa2.44□□□□□ -2.02
UBP16YPL072W PDR16P53860 351 aaKnown RBP2.44□□□□□ -2.02
UBP16YPL072W RSN1Q03516 953 aa2.44□□□□□ -2.02
UBP16YPL072W TAF12Q03761 539 aa2.44□□□□□ -2.02
UBP16YPL072W MDM30Q05930 598 aa2.44□□□□□ -2.02
UBP16YPL072W NDL1Q06568 189 aa2.44□□□□□ -2.02
UBP16YPL072W ARO3P14843 370 aaKnown RBP2.43□□□□□ -2.02
UBP16YPL072W SEC63P14906 663 aa2.43□□□□□ -2.02
UBP16YPL072W UBA1P22515 1024 aaKnown RBP2.43□□□□□ -2.02
UBP16YPL072W SMY1P32364 656 aaKnown RBP2.43□□□□□ -2.02
UBP16YPL072W NRP1P32770 719 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
UBP16YPL072W RFC3P38629 340 aa2.43□□□□□ -2.02
UBP16YPL072W GAT2P40209 560 aa2.43□□□□□ -2.02
UBP16YPL072W YIP1P53039 248 aa2.43□□□□□ -2.02
UBP16YPL072W RRB1Q04225 511 aaKnown RBP2.43□□□□□ -2.02
UBP16YPL072W MGR3Q04472 501 aa2.43□□□□□ -2.02
UBP16YPL072W PML1Q07930 204 aaPredicted RBP2.43□□□□□ -2.02
UBP16YPL072W SGT1Q08446 395 aa2.43□□□□□ -2.02
UBP16YPL072W FDH1Q08911 376 aa2.43□□□□□ -2.02
UBP16YPL072W RTC5Q12108 567 aaKnown RBP2.43□□□□□ -2.02
UBP16YPL072W PKH2Q12236 1081 aaKnown RBP2.43□□□□□ -2.02
UBP16YPL072W PSY3Q12318 242 aa2.43□□□□□ -2.02
UBP16YPL072W ARG4P04076 463 aaPredicted RBP2.42□□□□□ -2.02
UBP16YPL072W ILV5P06168 395 aaKnown RBP2.42□□□□□ -2.02
UBP16YPL072W DST1P07273 309 aa2.42□□□□□ -2.02
UBP16YPL072W SLM5P25345 492 aaKnown RBP2.42□□□□□ -2.02
UBP16YPL072W LSB5P25369 354 aa2.42□□□□□ -2.02
UBP16YPL072W TIP1P27654 210 aaPredicted RBP2.42□□□□□ -2.02
UBP16YPL072W FAA1P30624 700 aaKnown RBP2.42□□□□□ -2.02
UBP16YPL072W MNS1P32906 549 aa2.42□□□□□ -2.02
UBP16YPL072W MSG5P38590 489 aa2.42□□□□□ -2.02
UBP16YPL072W INM1P38710 295 aa2.42□□□□□ -2.02
UBP16YPL072W STN1P38960 494 aa2.42□□□□□ -2.02
UBP16YPL072W LYS1P38998 373 aaRIP-Chip data2.42□□□□□ -2.02not detected
UBP16YPL072W LAM5P43560 674 aa2.42□□□□□ -2.02
UBP16YPL072W MPP10P47083 593 aaKnown RBP2.42□□□□□ -2.02
UBP16YPL072W MPS2P53159 387 aa2.42□□□□□ -2.02
UBP16YPL072W HST1P53685 503 aa2.42□□□□□ -2.02
UBP16YPL072W KTR5P53966 522 aaPredicted RBP2.42□□□□□ -2.02
UBP16YPL072W HXT11P54862 567 aa2.42□□□□□ -2.02
UBP16YPL072W MMT1Q03218 510 aa2.42□□□□□ -2.02
UBP16YPL072W TSA2Q04120 196 aa2.42□□□□□ -2.02
UBP16YPL072W NSE1Q07913 336 aa2.42□□□□□ -2.02
UBP16YPL072W TIM18Q08749 192 aa2.42□□□□□ -2.02
UBP16YPL072W NFT1P0CE68 1218 aa2.42□□□□□ -2.02
UBP16YPL072W RPS8AP0CX39 200 aaKnown RBP2.42□□□□□ -2.02
UBP16YPL072W RPS8BP0CX40 200 aaKnown RBP2.42□□□□□ -2.02
UBP16YPL072W SPO12P17123 173 aa2.42□□□□□ -2.02
UBP16YPL072W DAP2P18962 818 aa2.42□□□□□ -2.02
UBP16YPL072W GEX1P25596 615 aa2.42□□□□□ -2.02
UBP16YPL072W SRB2P34162 210 aa2.42□□□□□ -2.02
UBP16YPL072W PES4P39684 611 aa2.42□□□□□ -2.02
UBP16YPL072W MMF1P40185 145 aaKnown RBP2.42□□□□□ -2.02
UBP16YPL072W SHE4P51534 789 aa2.42□□□□□ -2.02
UBP16YPL072W RRP46P53256 223 aaPredicted RBP2.42□□□□□ -2.02
UBP16YPL072W MTM1P53320 366 aa2.42□□□□□ -2.02
UBP16YPL072W YNL143CP53908 130 aa2.42□□□□□ -2.02
UBP16YPL072W YMR181CQ03231 154 aa2.42□□□□□ -2.02
UBP16YPL072W BET5Q03630 159 aa2.42□□□□□ -2.02
UBP16YPL072W IPK1Q06667 281 aa2.42□□□□□ -2.02
UBP16YPL072W AAD15Q08361 143 aa2.42□□□□□ -2.02
UBP16YPL072W MDY2Q12285 212 aa2.42□□□□□ -2.02
UBP16YPL072W COX3P00420 269 aa2.41□□□□□ -2.02
UBP16YPL072W RPC40P07703 335 aaKnown RBP2.41□□□□□ -2.02
UBP16YPL072W SCH9P11792 824 aaKnown RBP2.41□□□□□ -2.02
UBP16YPL072W YSC83P32792 385 aa2.41□□□□□ -2.02
UBP16YPL072W COX13P32799 129 aa2.41□□□□□ -2.02
UBP16YPL072W SPT10P35208 640 aa2.41□□□□□ -2.02
UBP16YPL072W ATP3P38077 311 aaKnown RBP2.41□□□□□ -2.02
UBP16YPL072W QDR3P38227 689 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms