RNA–Protein interactions for RNA: YLR338W

OPI9, Transcript of Dubious open reading frame, yeast

Gene OPI9, Length 858 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
OPI9	YLR338W	RHO4	Q00246	291 aa		13.13	□□□□□ -0.31
OPI9	YLR338W	SED5	Q01590	340 aa		13.13	□□□□□ -0.31
OPI9	YLR338W	RIM13	Q03792	727 aa		13.13	□□□□□ -0.31
OPI9	YLR338W	MET17	P06106	444 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	PET9	P18239	318 aa	Known RBP	13.12	□□□□□ -0.31
OPI9	YLR338W	MGR1	P25573	417 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	RPN2	P32565	945 aa	Known RBP	13.12	□□□□□ -0.31
OPI9	YLR338W	CDC13	P32797	924 aa	Known RBP	13.12	□□□□□ -0.31
OPI9	YLR338W	SKN1	P33336	771 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	DOA1	P36037	715 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	ECM4	P36156	370 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	AHP1	P38013	176 aa	Known RBP	13.12	□□□□□ -0.31
OPI9	YLR338W	YLF2	P38746	405 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	SOP4	P39543	234 aa	Predicted RBP	13.12	□□□□□ -0.31
OPI9	YLR338W	IES5	P40060	125 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	RPL10	P41805	221 aa	Known RBP	13.12	□□□□□ -0.31
OPI9	YLR338W	CIS3	P47001	227 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	STE24	P47154	453 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	ARO10	Q06408	635 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	RRP12	Q12754	1228 aa	Known RBP	13.12	□□□□□ -0.31
OPI9	YLR338W	YPL119C-A	Q3E751	87 aa		13.12	□□□□□ -0.31
OPI9	YLR338W	VPS33	P20795	691 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	NPR1	P22211	790 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	PTP1	P25044	335 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	MRPL32	P25348	183 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	13.11	□□□□□ -0.31	not detected
OPI9	YLR338W	PRO1	P32264	428 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	TUL1	P36096	758 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	KRE29	P40026	464 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	GCN20	P43535	752 aa	Known RBP	13.11	□□□□□ -0.31
OPI9	YLR338W	UBC9	P50623	157 aa	Predicted RBP	13.11	□□□□□ -0.31
OPI9	YLR338W	TWF1	P53250	332 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	YNR014W	P53719	212 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	YMR310C	Q04867	317 aa	Predicted RBP	13.11	□□□□□ -0.31
OPI9	YLR338W	MMT2	Q08970	484 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	BMT6	Q12291	365 aa		13.11	□□□□□ -0.31
OPI9	YLR338W	RBL2	P48606	106 aa	Known RBP	13.1	□□□□□ -0.31
OPI9	YLR338W	ART5	P53244	586 aa	Known RBP	13.1	□□□□□ -0.31
OPI9	YLR338W	YDR262W	Q12331	272 aa		13.1	□□□□□ -0.31
OPI9	YLR338W	TEF4	P36008	412 aa	Known RBP	13.09	□□□□□ -0.31
OPI9	YLR338W	PRE6	P40303	254 aa	Known RBP	13.09	□□□□□ -0.31
OPI9	YLR338W	SOK1	P40317	901 aa		13.09	□□□□□ -0.31
OPI9	YLR338W	IRC5	P43610	853 aa		13.09	□□□□□ -0.31
OPI9	YLR338W	SHE4	P51534	789 aa		13.09	□□□□□ -0.31
OPI9	YLR338W	NFI1	Q12216	726 aa		13.09	□□□□□ -0.31
OPI9	YLR338W	PST2	Q12335	198 aa	Known RBP	13.09	□□□□□ -0.31
OPI9	YLR338W	TRM10	Q12400	293 aa		13.09	□□□□□ -0.31
OPI9	YLR338W	TRM1	P15565	570 aa	Known RBP	13.08	□□□□□ -0.32
OPI9	YLR338W	RNQ1	P25367	405 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	RRP7	P25368	297 aa	Predicted RBP	13.08	□□□□□ -0.32
OPI9	YLR338W	MAE1	P36013	669 aa	Known RBP	13.08	□□□□□ -0.32
OPI9	YLR338W	MNL1	P38888	796 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	IPT1	P38954	527 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	MET28	P40573	187 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	HOS2	P53096	452 aa	Predicted RBP	13.08	□□□□□ -0.32
OPI9	YLR338W	CDH1	P53197	566 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	TPS1	Q00764	495 aa	Known RBP	13.08	□□□□□ -0.32
OPI9	YLR338W	ARP10	Q04549	284 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	YML053C	Q04978	212 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	ISR1	Q06098	443 aa	Known RBP	13.08	□□□□□ -0.32
OPI9	YLR338W	LEU9	Q12166	604 aa	Known RBP	13.08	□□□□□ -0.32
OPI9	YLR338W	HER1	Q12276	1246 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	YKL033W-A	Q86ZR7	236 aa		13.08	□□□□□ -0.32
OPI9	YLR338W	SLY41	P22215	453 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	TAH1	P25638	111 aa	Predicted RBP	13.07	□□□□□ -0.32
OPI9	YLR338W	SRB5	P32585	307 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	13.07	□□□□□ -0.32	not detected
OPI9	YLR338W	AST2	P39945	430 aa	Known RBP	13.07	□□□□□ -0.32
OPI9	YLR338W	ISC1	P40015	477 aa	Known RBP	13.07	□□□□□ -0.32
OPI9	YLR338W	SWP82	P43554	623 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	SRL4	Q03085	281 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	YMD8	Q03697	442 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	YLR345W	Q06137	509 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	IRC13	Q08630	104 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	BSC1	Q12140	328 aa		13.07	□□□□□ -0.32
OPI9	YLR338W	SEC2	P17065	759 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	RCY1	P39531	840 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	TED1	P40533	473 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	SNM1	P40993	198 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	BIT61	P47041	543 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	ROM1	P53046	1155 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	YGR168C	P53293	376 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	SUN4	P53616	420 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	GRX5	Q02784	150 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	FMP42	Q04991	504 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	MCM21	Q06675	368 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	FDH1	Q08911	376 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	YTM1	Q12024	460 aa	Predicted RBP	13.06	□□□□□ -0.32
OPI9	YLR338W	YPL066W	Q12194	479 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	GLO4	Q12320	285 aa		13.06	□□□□□ -0.32
OPI9	YLR338W	RPC40	P07703	335 aa	Known RBP	13.05	□□□□□ -0.32
OPI9	YLR338W	RPB5	P20434	215 aa		13.05	□□□□□ -0.32
OPI9	YLR338W	BUD5	P25300	642 aa	Predicted RBP	13.05	□□□□□ -0.32
OPI9	YLR338W	ARE1	P25628	610 aa		13.05	□□□□□ -0.32
OPI9	YLR338W	CDC12	P32468	407 aa	Known RBP	13.05	□□□□□ -0.32
OPI9	YLR338W	UTP11	P34247	250 aa	Predicted RBP	13.05	□□□□□ -0.32
OPI9	YLR338W	CTF8	P38877	133 aa		13.05	□□□□□ -0.32
OPI9	YLR338W	HOC1	P47124	396 aa		13.05	□□□□□ -0.32
OPI9	YLR338W	MTQ1	P53944	314 aa		13.05	□□□□□ -0.32
OPI9	YLR338W	RSF1	Q05043	376 aa		13.05	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 88.9 ms