RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W BRR1Q99177 341 aaPredicted RBP2.33□□□□□ -2.04
HRD3YLR207W QCR6P00127 147 aa2.32□□□□□ -2.04
HRD3YLR207W SAR1P20606 190 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W VPS3P23643 1011 aa2.32□□□□□ -2.04
HRD3YLR207W DOA4P32571 926 aa2.32□□□□□ -2.04
HRD3YLR207W RPC25P35718 212 aa2.32□□□□□ -2.04
HRD3YLR207W YKT6P36015 200 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W TPO5P36029 618 aa2.32□□□□□ -2.04
HRD3YLR207W YKL070WP36087 169 aa2.32□□□□□ -2.04
HRD3YLR207W YHR210CP38893 341 aa2.32□□□□□ -2.04
HRD3YLR207W GAA1P39012 614 aa2.32□□□□□ -2.04
HRD3YLR207W AIM10P39965 576 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W ALD5P40047 520 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W SNL1P40548 159 aa2.32□□□□□ -2.04
HRD3YLR207W IAH1P41734 238 aa2.32□□□□□ -2.04
HRD3YLR207W MND1P53102 219 aa2.32□□□□□ -2.04
HRD3YLR207W VOA1P53262 265 aa2.32□□□□□ -2.04
HRD3YLR207W ZPR1P53303 486 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W RET3P53600 189 aa2.32□□□□□ -2.04
HRD3YLR207W NRD1P53617 575 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
HRD3YLR207W ADE13Q05911 482 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W TPO3Q06451 622 aa2.32□□□□□ -2.04
HRD3YLR207W ARR1Q06596 294 aa2.32□□□□□ -2.04
HRD3YLR207W MRPL35Q06678 367 aa2.32□□□□□ -2.04
HRD3YLR207W YPR078CQ06813 372 aa2.32□□□□□ -2.04
HRD3YLR207W POS5Q06892 414 aa2.32□□□□□ -2.04
HRD3YLR207W RDL1Q12305 139 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W LDB17Q12342 491 aa2.32□□□□□ -2.04
HRD3YLR207W CDC21P06785 304 aa2.32□□□□□ -2.04
HRD3YLR207W CAR2P07991 424 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W SSA3P09435 649 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W RNA1P11745 407 aaKnown RBP2.32□□□□□ -2.04
HRD3YLR207W CLN3P13365 580 aa2.32□□□□□ -2.04
HRD3YLR207W RPB4P20433 221 aaPredicted RBP2.32□□□□□ -2.04
HRD3YLR207W NRP1P32770 719 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
HRD3YLR207W ROT2P38138 954 aa2.32□□□□□ -2.04
HRD3YLR207W RRN10P38204 145 aa2.32□□□□□ -2.04
HRD3YLR207W SPP381P38282 291 aaPredicted RBP2.32□□□□□ -2.04
HRD3YLR207W RTT107P38850 1070 aa2.32□□□□□ -2.04
HRD3YLR207W RSM25P40496 264 aa2.32□□□□□ -2.04
HRD3YLR207W SNG1P46950 547 aa2.32□□□□□ -2.04
HRD3YLR207W ARK1P53974 638 aa2.32□□□□□ -2.04
HRD3YLR207W MSC1Q03104 513 aa2.32□□□□□ -2.04
HRD3YLR207W CAB5Q03941 241 aa2.32□□□□□ -2.04
HRD3YLR207W RRN11Q04712 507 aa2.32□□□□□ -2.04
HRD3YLR207W FMP27Q06179 2628 aa2.32□□□□□ -2.04
HRD3YLR207W BCP1Q06338 283 aa2.32□□□□□ -2.04
HRD3YLR207W CLP1Q08685 445 aaPredicted RBP2.32□□□□□ -2.04
HRD3YLR207W TIP41Q12199 356 aa2.32□□□□□ -2.04
HRD3YLR207W SUT2Q12286 268 aa2.32□□□□□ -2.04
HRD3YLR207W MED4Q12343 284 aa2.32□□□□□ -2.04
HRD3YLR207W YOR012WQ12351 137 aa2.32□□□□□ -2.04
HRD3YLR207W PNS1Q12412 539 aa2.32□□□□□ -2.04
HRD3YLR207W SFG1Q12507 346 aa2.32□□□□□ -2.04
HRD3YLR207W ADE4P04046 510 aaKnown RBP2.31□□□□□ -2.04
HRD3YLR207W RIP1P08067 215 aa2.31□□□□□ -2.04
HRD3YLR207W ATP10P18496 279 aa2.31□□□□□ -2.04
HRD3YLR207W ISY1P21374 235 aaPredicted RBP2.31□□□□□ -2.04
HRD3YLR207W SGV1P23293 657 aaKnown RBP2.31□□□□□ -2.04
HRD3YLR207W YKL023WP36103 277 aaKnown RBP2.31□□□□□ -2.04
HRD3YLR207W BNA4P38169 460 aa2.31□□□□□ -2.04
HRD3YLR207W EFM2P38347 419 aa2.31□□□□□ -2.04
HRD3YLR207W PCA1P38360 1216 aa2.31□□□□□ -2.04
HRD3YLR207W SIP3P38717 1229 aa2.31□□□□□ -2.04
HRD3YLR207W ALP1P38971 573 aa2.31□□□□□ -2.04
HRD3YLR207W BNA3P47039 444 aaKnown RBP2.31□□□□□ -2.04
HRD3YLR207W GTO1P48239 356 aa2.31□□□□□ -2.04
HRD3YLR207W SEG1Q04279 960 aa2.31□□□□□ -2.04
HRD3YLR207W IRC10Q08118 586 aa2.31□□□□□ -2.04
HRD3YLR207W RPS10AQ08745 105 aaPredicted RBP2.31□□□□□ -2.04
HRD3YLR207W YPR089WO13585 888 aa2.31□□□□□ -2.04
HRD3YLR207W NFT1P0CE68 1218 aa2.31□□□□□ -2.04
HRD3YLR207W MAS1P10507 462 aa2.31□□□□□ -2.04
HRD3YLR207W POX1P13711 748 aa2.31□□□□□ -2.04
HRD3YLR207W SPS22P25380 463 aa2.31□□□□□ -2.04
HRD3YLR207W GSY2P27472 705 aa2.31□□□□□ -2.04
HRD3YLR207W MIA40P36046 403 aa2.31□□□□□ -2.04
HRD3YLR207W YBR139WP38109 508 aa2.31□□□□□ -2.04
HRD3YLR207W DUG2P38149 878 aa2.31□□□□□ -2.04
HRD3YLR207W YMR262WP38430 313 aa2.31□□□□□ -2.04
HRD3YLR207W CHS7P38843 316 aa2.31□□□□□ -2.04
HRD3YLR207W TOS3P43637 560 aa2.31□□□□□ -2.04
HRD3YLR207W TAX4P47030 604 aa2.31□□□□□ -2.04
HRD3YLR207W YGL185CP53100 379 aa2.31□□□□□ -2.04
HRD3YLR207W SPO19Q03029 223 aa2.31□□□□□ -2.04
HRD3YLR207W SWF1Q04629 336 aa2.31□□□□□ -2.04
HRD3YLR207W BSP1Q06604 576 aa2.31□□□□□ -2.04
HRD3YLR207W RDR1Q08904 546 aa2.31□□□□□ -2.04
HRD3YLR207W DCP1Q12517 231 aaPredicted RBP2.31□□□□□ -2.04
HRD3YLR207W DDP1Q99321 188 aaKnown RBP2.31□□□□□ -2.04
HRD3YLR207W YER145C-AA0A023PYF4 145 aa2.3□□□□□ -2.04
HRD3YLR207W RPL24AP04449 155 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W PEP4P07267 405 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W CHO1P08456 276 aa2.3□□□□□ -2.04
HRD3YLR207W RPL4AP10664 362 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W RSR1P13856 272 aa2.3□□□□□ -2.04
HRD3YLR207W URE2P23202 354 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W SIN4P32259 974 aa2.3□□□□□ -2.04
HRD3YLR207W CYS4P32582 507 aaKnown RBP2.3□□□□□ -2.04
HRD3YLR207W PEX2P32800 271 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms