RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	MMP1	Q12372	583 aa		4.6	□□□□□ -1.67
CLF1	YLR117C	SUS1	Q6WNK7	96 aa		4.6	□□□□□ -1.67
CLF1	YLR117C	SRN2	Q99176	213 aa		4.6	□□□□□ -1.67
CLF1	YLR117C	MPD2	Q99316	277 aa		4.6	□□□□□ -1.67
CLF1	YLR117C	KIN28	P06242	306 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	SSA3	P09435	649 aa	Known RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	HOM3	P10869	527 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CLF1	YLR117C	RNA15	P25299	296 aa	Predicted RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	PHO91	P27514	894 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	FAA1	P30624	700 aa	Known RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	DHR2	P36009	735 aa	Predicted RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	TCM62	P38228	572 aa	Known RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	FLC2	P39719	783 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	RSP5	P39940	809 aa	Known RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	KHA1	P40309	873 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	YJL218W	P40892	196 aa	Known RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	MID1	P41821	548 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	GLR1	P41921	483 aa	Known RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	IDP2	P41939	412 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	YFL012W	P43580	148 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	PHO86	P46956	311 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	MRX5	P47007	382 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	AZR1	P50080	613 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	TOF2	Q02208	771 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	SLD5	Q03406	294 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	YMD8	Q03697	442 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	YMR155W	Q03795	547 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	RRG7	Q08774	242 aa	Predicted RBP	4.59	□□□□□ -1.67
CLF1	YLR117C	DDC1	Q08949	612 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	RKM5	Q12367	367 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	AGC1	Q12482	902 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	YMR030W-A	Q3E760	96 aa		4.59	□□□□□ -1.67
CLF1	YLR117C	THP2	O13539	261 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	RPP2B	P02400	110 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	RSA4	P25382	515 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	TAH1	P25638	111 aa	Predicted RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	RPL8B	P29453	256 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	MRPL9	P31334	269 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	ARP2	P32381	391 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	DAL3	P32459	195 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	MRPL36	P36531	177 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	SOL2	P37262	315 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	TAT1	P38085	619 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	POL12	P38121	705 aa	Predicted RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	CBR1	P38626	284 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	SOL3	P38858	249 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	FET3	P38993	636 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	AIM10	P39965	576 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	PTR3	P43606	678 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	JHD2	P47156	728 aa	Predicted RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	MCM22	P47167	239 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	MKC7	P53379	596 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	ODC1	Q03028	310 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	RLI1	Q03195	608 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	OST6	Q03723	332 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	YLR173W	Q06247	608 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	OPT2	Q06593	877 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	ESC8	Q08119	714 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	DIN7	Q12086	430 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	VMA9	Q3E7B6	73 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	BI3	Q9ZZW7	517 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	TIM9	O74700	87 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	SUC2	P00724	532 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	MTF1	P14908	341 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	YPK2	P18961	677 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	MIR1	P23641	311 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	MNE1	P24720	663 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	GRR1	P24814	1151 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	DCC1	P25559	380 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	BUB3	P26449	341 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CLF1	YLR117C	URA10	P30402	227 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	SUR1	P33300	382 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	TUL1	P36096	758 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	FLO10	P36170	1169 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	YBR013C	P38215	129 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	CRP1	P38845	465 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	UIP3	P39547	235 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	LAS21	P40367	830 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	AIM22	P47051	409 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	NBP35	P52920	328 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	AIF1	P52923	378 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	PRM1	P53835	661 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	IDP3	P53982	420 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	MRPS17	Q03246	237 aa	Predicted RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	YMR265C	Q03508	461 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	NHX1	Q04121	633 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	RCO1	Q04779	684 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	PML1	Q07930	204 aa	Predicted RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	UAF30	Q08747	228 aa		4.58	□□□□□ -1.68
CLF1	YLR117C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CLF1	YLR117C	TMA7	Q3E764	64 aa	Known RBP	4.58	□□□□□ -1.68
CLF1	YLR117C	PMD1	P32634	1753 aa		4.57	□□□□□ -1.68
CLF1	YLR117C	HTB1	P02293	131 aa	Known RBP	4.57	□□□□□ -1.68
CLF1	YLR117C	HTB2	P02294	131 aa		4.57	□□□□□ -1.68
CLF1	YLR117C	GAL80	P04387	435 aa		4.57	□□□□□ -1.68
CLF1	YLR117C	ARG80	P07249	177 aa		4.57	□□□□□ -1.68
CLF1	YLR117C	TRP4	P07285	380 aa	Predicted RBP	4.57	□□□□□ -1.68
CLF1	YLR117C	GAP1	P19145	602 aa	Predicted RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms