RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C DBP9Q06218 594 aaKnown RBP9.77□□□□□ -0.85
SHM2YLR058C NDL1Q06568 189 aa9.77□□□□□ -0.85
SHM2YLR058C DCI1Q08558 271 aa9.77□□□□□ -0.85
SHM2YLR058C FDH1Q08911 376 aa9.77□□□□□ -0.85
SHM2YLR058C SEC39Q12745 709 aa9.77□□□□□ -0.85
SHM2YLR058C APE2P32454 952 aaKnown RBP9.76□□□□□ -0.85
SHM2YLR058C MDJ1P35191 511 aa9.76□□□□□ -0.85
SHM2YLR058C TPA1P40032 644 aaKnown RBP9.76□□□□□ -0.85
SHM2YLR058C GIP2P40036 548 aa9.76□□□□□ -0.85
SHM2YLR058C YIL046W-AQ3E7Z4 54 aa9.76□□□□□ -0.85
SHM2YLR058C GRR1P24814 1151 aa9.75□□□□□ -0.85
SHM2YLR058C CLB4P24871 460 aa9.75□□□□□ -0.85
SHM2YLR058C YGR201CP42936 225 aa9.75□□□□□ -0.85
SHM2YLR058C RRN5Q02983 363 aa9.75□□□□□ -0.85
SHM2YLR058C SWA2Q06677 668 aa9.75□□□□□ -0.85
SHM2YLR058C REH1Q06709 432 aa9.75□□□□□ -0.85
SHM2YLR058C YEH1Q07804 573 aa9.75□□□□□ -0.85
SHM2YLR058C PUS7Q08647 676 aaKnown RBP9.75□□□□□ -0.85
SHM2YLR058C CYR1P08678 2026 aaKnown RBP9.75□□□□□ -0.85
SHM2YLR058C GPH1P06738 902 aaKnown RBP9.74□□□□□ -0.85
SHM2YLR058C ATR1P13090 542 aa9.74□□□□□ -0.85
SHM2YLR058C TEC1P18412 486 aa9.74□□□□□ -0.85
SHM2YLR058C DBP3P20447 523 aaKnown RBP9.74□□□□□ -0.85
SHM2YLR058C APN1P22936 367 aa9.74□□□□□ -0.85
SHM2YLR058C CMK1P27466 446 aaKnown RBP9.74□□□□□ -0.85
SHM2YLR058C UBC8P28263 218 aa9.74□□□□□ -0.85
SHM2YLR058C PEP12P32854 288 aa9.74□□□□□ -0.85
SHM2YLR058C GDH2P33327 1092 aaKnown RBP9.74□□□□□ -0.85
SHM2YLR058C YFL066CP43538 392 aa9.74□□□□□ -0.85
SHM2YLR058C JHD2P47156 728 aaPredicted RBP9.74□□□□□ -0.85
SHM2YLR058C ELP4Q02884 456 aaKnown RBP9.74□□□□□ -0.85
SHM2YLR058C RSC9Q03124 581 aa9.74□□□□□ -0.85
SHM2YLR058C RAD30Q04049 632 aa9.74□□□□□ -0.85
SHM2YLR058C DTD1Q07648 150 aaKnown RBP9.74□□□□□ -0.85
SHM2YLR058C SFM1Q12314 213 aa9.74□□□□□ -0.85
SHM2YLR058C FBA1P14540 359 aaKnown RBP9.73□□□□□ -0.85
SHM2YLR058C IRA1P18963 3092 aa9.73□□□□□ -0.85
SHM2YLR058C POL4P25615 582 aa9.73□□□□□ -0.85
SHM2YLR058C KAP122P32767 1081 aa9.73□□□□□ -0.85
SHM2YLR058C BIG1P38813 335 aa9.73□□□□□ -0.85
SHM2YLR058C TRR2P38816 342 aa9.73□□□□□ -0.85
SHM2YLR058C MTG2P38860 518 aa9.73□□□□□ -0.85
SHM2YLR058C ALR2P43553 858 aa9.73□□□□□ -0.85
SHM2YLR058C RPS12P48589 143 aaKnown RBP9.73□□□□□ -0.85
SHM2YLR058C VMA10P48836 114 aaKnown RBP9.73□□□□□ -0.85
SHM2YLR058C GPI8P49018 411 aa9.73□□□□□ -0.85
SHM2YLR058C RIM13Q03792 727 aa9.73□□□□□ -0.85
SHM2YLR058C RSF1Q05043 376 aa9.73□□□□□ -0.85
SHM2YLR058C YPR097WQ06839 1073 aa9.73□□□□□ -0.85
SHM2YLR058C VIK1Q12045 647 aa9.73□□□□□ -0.85
SHM2YLR058C TSC13Q99190 310 aa9.73□□□□□ -0.85
SHM2YLR058C FAS1P07149 2051 aaKnown RBP9.73□□□□□ -0.85
SHM2YLR058C AAC3P18238 307 aa9.73□□□□□ -0.85
SHM2YLR058C RER1P25560 188 aa9.73□□□□□ -0.85
SHM2YLR058C YHR210CP38893 341 aa9.73□□□□□ -0.85
SHM2YLR058C ROM1P53046 1155 aa9.73□□□□□ -0.85
SHM2YLR058C KRE28Q04431 385 aa9.73□□□□□ -0.85
SHM2YLR058C ARO10Q06408 635 aa9.73□□□□□ -0.85
SHM2YLR058C YPR174CQ06616 221 aaPredicted RBP9.73□□□□□ -0.85
SHM2YLR058C YPR091CQ06833 770 aa9.73□□□□□ -0.85
SHM2YLR058C LOT6Q07923 191 aa9.73□□□□□ -0.85
SHM2YLR058C YOL073CQ08232 322 aa9.73□□□□□ -0.85
SHM2YLR058C RSA1Q08932 381 aa9.73□□□□□ -0.85
SHM2YLR058C MMP1Q12372 583 aa9.73□□□□□ -0.85
SHM2YLR058C HOP09932 586 aa9.72□□□□□ -0.85
SHM2YLR058C GSH1P32477 678 aa9.72□□□□□ -0.85
SHM2YLR058C WBP1P33767 430 aaKnown RBP9.72□□□□□ -0.85
SHM2YLR058C HCS1P34243 683 aa9.72□□□□□ -0.85
SHM2YLR058C THO1P40040 218 aaKnown RBP9.72□□□□□ -0.85
SHM2YLR058C UTP25P40498 721 aaKnown RBP9.72□□□□□ -0.85
SHM2YLR058C BNA3P47039 444 aaKnown RBP9.72□□□□□ -0.85
SHM2YLR058C YMR226CQ05016 267 aaKnown RBP9.72□□□□□ -0.85
SHM2YLR058C TEL1P38110 2787 aa9.71□□□□□ -0.86
SHM2YLR058C AI4P03878 556 aa9.71□□□□□ -0.86
SHM2YLR058C RHO1P06780 209 aaKnown RBP9.71□□□□□ -0.86
SHM2YLR058C CDC4P07834 779 aa9.71□□□□□ -0.86
SHM2YLR058C SEC2P17065 759 aa9.71□□□□□ -0.86
SHM2YLR058C THR1P17423 357 aaKnown RBP9.71□□□□□ -0.86
SHM2YLR058C FAA1P30624 700 aaKnown RBP9.71□□□□□ -0.86
SHM2YLR058C LOT5P34234 306 aa9.71□□□□□ -0.86
SHM2YLR058C TEF4P36008 412 aaKnown RBP9.71□□□□□ -0.86
SHM2YLR058C BET3P36149 193 aa9.71□□□□□ -0.86
SHM2YLR058C FES1P38260 290 aa9.71□□□□□ -0.86
SHM2YLR058C ICE2P40499 491 aa9.71□□□□□ -0.86
SHM2YLR058C CAK1P43568 368 aaPredicted RBP9.71□□□□□ -0.86
SHM2YLR058C AAD10P47182 288 aa9.71□□□□□ -0.86
SHM2YLR058C TWF1P53250 332 aa9.71□□□□□ -0.86
SHM2YLR058C TPC1P53257 314 aa9.71□□□□□ -0.86
SHM2YLR058C MTQ1P53944 314 aa9.71□□□□□ -0.86
SHM2YLR058C SNP1Q00916 300 aaPredicted RBP9.71□□□□□ -0.86
SHM2YLR058C TPP1Q03796 238 aa9.71□□□□□ -0.86
SHM2YLR058C SMA2Q04658 369 aa9.71□□□□□ -0.86
SHM2YLR058C NAT4Q04751 285 aa9.71□□□□□ -0.86
SHM2YLR058C YPR172WQ06608 200 aa9.71□□□□□ -0.86
SHM2YLR058C MRX4Q12467 430 aa9.71□□□□□ -0.86
SHM2YLR058C TOR1P35169 2470 aa9.71□□□□□ -0.86
SHM2YLR058C CBS1P14066 229 aa9.7□□□□□ -0.86
SHM2YLR058C MCK1P21965 375 aaKnown RBP9.7□□□□□ -0.86
SHM2YLR058C CTR86P25355 563 aa9.7□□□□□ -0.86
SHM2YLR058C RPN2P32565 945 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms