RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W TY2A-FP0CX61 438 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-GR2P0CX62 438 aa3.61□□□□□ -1.83
SSL1YLR005W MSS116P15424 664 aaKnown RBP3.61□□□□□ -1.83
SSL1YLR005W GUK1P15454 187 aaKnown RBP3.61□□□□□ -1.83
SSL1YLR005W HEM15P16622 393 aa3.61□□□□□ -1.83
SSL1YLR005W MRPL25P23369 157 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-CP25383 438 aa3.61□□□□□ -1.83
SSL1YLR005W MXR2P25566 168 aa3.61□□□□□ -1.83
SSL1YLR005W EMP70P32802 667 aa3.61□□□□□ -1.83
SSL1YLR005W PTM1P32857 523 aa3.61□□□□□ -1.83
SSL1YLR005W SDH3P33421 198 aa3.61□□□□□ -1.83
SSL1YLR005W MFT1P33441 392 aaKnown RBP3.61□□□□□ -1.83
SSL1YLR005W MUD2P36084 527 aaKnown RBP3.61□□□□□ -1.83
SSL1YLR005W YBR139WP38109 508 aa3.61□□□□□ -1.83
SSL1YLR005W ECM1P39715 212 aa3.61□□□□□ -1.83
SSL1YLR005W PAC11P40960 533 aa3.61□□□□□ -1.83
SSL1YLR005W YRB1P41920 201 aaKnown RBP3.61□□□□□ -1.83
SSL1YLR005W BIO3P50277 480 aa3.61□□□□□ -1.83
SSL1YLR005W ROG1P53118 685 aa3.61□□□□□ -1.83
SSL1YLR005W EFM5P53200 248 aaKnown RBP3.61□□□□□ -1.83
SSL1YLR005W YAP1802P53309 568 aa3.61□□□□□ -1.83
SSL1YLR005W IBD2P53892 351 aa3.61□□□□□ -1.83
SSL1YLR005W YSA1Q01976 231 aa3.61□□□□□ -1.83
SSL1YLR005W YDR541CQ03049 344 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-DR2Q03483 438 aa3.61□□□□□ -1.83
SSL1YLR005W TAF12Q03761 539 aa3.61□□□□□ -1.83
SSL1YLR005W CRN1Q06440 651 aa3.61□□□□□ -1.83
SSL1YLR005W REX4Q08237 289 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-BQ12260 438 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-OR2Q12293 438 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-DR1Q12392 438 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-OR1Q12439 438 aa3.61□□□□□ -1.83
SSL1YLR005W TY2A-DR3Q99303 438 aa3.61□□□□□ -1.83
SSL1YLR005W Q0010Q9ZZX9 128 aa3.61□□□□□ -1.83
SSL1YLR005W SIR3P06701 978 aa3.6□□□□□ -1.83
SSL1YLR005W GCD2P12754 651 aaPredicted RBP3.6□□□□□ -1.83
SSL1YLR005W CBF1P17106 351 aa3.6□□□□□ -1.83
SSL1YLR005W DMC1P25453 334 aa3.6□□□□□ -1.83
SSL1YLR005W YCR090CP25654 182 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W NUP120P35729 1037 aa3.6□□□□□ -1.83
SSL1YLR005W VPS21P36017 210 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W SAP1P39955 897 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W VRG4P40107 337 aa3.6□□□□□ -1.83
SSL1YLR005W YIL166CP40445 542 aa3.6□□□□□ -1.83
SSL1YLR005W YIL067CP40514 678 aa3.6□□□□□ -1.83
SSL1YLR005W RPL10P41805 221 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W SEC27P41811 889 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W PMT4P46971 762 aa3.6□□□□□ -1.83
SSL1YLR005W BPL1P48445 690 aaPredicted RBP3.6□□□□□ -1.83
SSL1YLR005W RPN14P53196 417 aa3.6□□□□□ -1.83
SSL1YLR005W PDR16P53860 351 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W LSM3P57743 89 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W APC4Q04601 652 aa3.6□□□□□ -1.83
SSL1YLR005W PDR8Q06149 701 aa3.6□□□□□ -1.83
SSL1YLR005W CYK3Q07533 885 aa3.6□□□□□ -1.83
SSL1YLR005W YOL019WQ08157 551 aa3.6□□□□□ -1.83
SSL1YLR005W MLH3Q12083 715 aa3.6□□□□□ -1.83
SSL1YLR005W YPL245WQ12179 454 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W RUP1Q12242 671 aa3.6□□□□□ -1.83
SSL1YLR005W PRS5Q12265 496 aaKnown RBP3.6□□□□□ -1.83
SSL1YLR005W RRP36Q12481 300 aaPredicted RBP3.6□□□□□ -1.83
SSL1YLR005W TMA17Q12513 150 aa3.6□□□□□ -1.83
SSL1YLR005W YCL012CQ8J0M4 134 aa3.6□□□□□ -1.83
SSL1YLR005W RGS2Q99188 309 aa3.6□□□□□ -1.83
SSL1YLR005W LEU4P06208 619 aaKnown RBP3.59□□□□□ -1.83
SSL1YLR005W STE7P06784 515 aa3.59□□□□□ -1.83
SSL1YLR005W SSC1P0CS90 654 aaKnown RBP3.59□□□□□ -1.83
SSL1YLR005W NMT1P14743 455 aa3.59□□□□□ -1.83
SSL1YLR005W MDM10P18409 493 aa3.59□□□□□ -1.83
SSL1YLR005W SEC14P24280 304 aaKnown RBP3.59□□□□□ -1.83
SSL1YLR005W SPB1P25582 841 aaPredicted RBP3.59□□□□□ -1.83
SSL1YLR005W DPB3P27344 201 aa3.59□□□□□ -1.83
SSL1YLR005W PHA2P32452 334 aa3.59□□□□□ -1.83
SSL1YLR005W DOA1P36037 715 aa3.59□□□□□ -1.83
SSL1YLR005W RRN3P36070 627 aa3.59□□□□□ -1.83
SSL1YLR005W ETR1P38071 380 aa3.59□□□□□ -1.83
SSL1YLR005W BMT2P38278 337 aa3.59□□□□□ -1.83
SSL1YLR005W SPC97P38863 823 aa3.59□□□□□ -1.83
SSL1YLR005W TPA1P40032 644 aaKnown RBP3.59□□□□□ -1.83
SSL1YLR005W YIL001WP40560 513 aa3.59□□□□□ -1.83
SSL1YLR005W CAF16P43569 289 aa3.59□□□□□ -1.83
SSL1YLR005W MIC19P43594 170 aa3.59□□□□□ -1.83
SSL1YLR005W MDV1P47025 714 aa3.59□□□□□ -1.83
SSL1YLR005W MPS3P47069 682 aa3.59□□□□□ -1.83
SSL1YLR005W RAD17P48581 401 aa3.59□□□□□ -1.83
SSL1YLR005W UBC9P50623 157 aaPredicted RBP3.59□□□□□ -1.83
SSL1YLR005W SEH1P53011 349 aaKnown RBP3.59□□□□□ -1.83
SSL1YLR005W GPG1P53130 126 aa3.59□□□□□ -1.83
SSL1YLR005W MAL13P53338 473 aa3.59□□□□□ -1.83
SSL1YLR005W LSC1P53598 329 aaKnown RBP3.59□□□□□ -1.83
SSL1YLR005W YNL140CP53910 189 aa3.59□□□□□ -1.83
SSL1YLR005W RMI1Q02685 241 aa3.59□□□□□ -1.83
SSL1YLR005W OAZ1Q02803 292 aa3.59□□□□□ -1.83
SSL1YLR005W ARO10Q06408 635 aa3.59□□□□□ -1.83
SSL1YLR005W RAD34Q06665 692 aa3.59□□□□□ -1.83
SSL1YLR005W ESA1Q08649 445 aa3.59□□□□□ -1.83
SSL1YLR005W GET4Q12125 312 aa3.59□□□□□ -1.83
SSL1YLR005W NMD4Q12129 218 aa3.59□□□□□ -1.83
SSL1YLR005W MDM32Q12171 622 aa3.59□□□□□ -1.83
SSL1YLR005W YOR097CQ12274 175 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms