RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C VMA5P31412 392 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C STE14P32584 239 aa4.66□□□□□ -1.66
CAF4YKR036C RPS1AP33442 255 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C MSN2P33748 704 aa4.66□□□□□ -1.66
CAF4YKR036C SPT10P35208 640 aa4.66□□□□□ -1.66
CAF4YKR036C ARP1P38696 384 aa4.66□□□□□ -1.66
CAF4YKR036C LAG1P38703 411 aa4.66□□□□□ -1.66
CAF4YKR036C RTC3P38804 111 aaPredicted RBP4.66□□□□□ -1.66
CAF4YKR036C COG3P40094 801 aa4.66□□□□□ -1.66
CAF4YKR036C YIL024CP40543 189 aa4.66□□□□□ -1.66
CAF4YKR036C YIR035CP40579 254 aa4.66□□□□□ -1.66
CAF4YKR036C DUG1P43616 481 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C BNA6P43619 295 aa4.66□□□□□ -1.66
CAF4YKR036C ASG7P46993 209 aa4.66□□□□□ -1.66
CAF4YKR036C YJL132WP47014 750 aa4.66□□□□□ -1.66
CAF4YKR036C YJR141WP47172 347 aaPredicted RBP4.66□□□□□ -1.66
CAF4YKR036C AAD10P47182 288 aa4.66□□□□□ -1.66
CAF4YKR036C YGR067CP53243 804 aa4.66□□□□□ -1.66
CAF4YKR036C RTS3P53289 263 aa4.66□□□□□ -1.66
CAF4YKR036C LSM3P57743 89 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C YCL001W-AP87012 153 aa4.66□□□□□ -1.66
CAF4YKR036C PRP38Q00723 242 aaPredicted RBP4.66□□□□□ -1.66
CAF4YKR036C NUP116Q02630 1113 aa4.66□□□□□ -1.66
CAF4YKR036C YDL121CQ07541 149 aa4.66□□□□□ -1.66
CAF4YKR036C SHS1Q07657 551 aa4.66□□□□□ -1.66
CAF4YKR036C RRG7Q08774 242 aaPredicted RBP4.66□□□□□ -1.66
CAF4YKR036C WTM1Q12363 437 aaKnown RBP4.66□□□□□ -1.66
CAF4YKR036C MHF2Q3E829 80 aa4.66□□□□□ -1.66
CAF4YKR036C GUK1P15454 187 aaKnown RBP4.65□□□□□ -1.67
CAF4YKR036C HSP26P15992 214 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
CAF4YKR036C MDH1P17505 334 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
CAF4YKR036C PMI40P29952 429 aaKnown RBP4.65□□□□□ -1.67
CAF4YKR036C SNC1P31109 117 aa4.65□□□□□ -1.67
CAF4YKR036C LDS1P31379 325 aa4.65□□□□□ -1.67
CAF4YKR036C ATP11P32453 318 aa4.65□□□□□ -1.67
CAF4YKR036C SCM4P32564 187 aa4.65□□□□□ -1.67
CAF4YKR036C UTR2P32623 467 aa4.65□□□□□ -1.67
CAF4YKR036C SHM2P37291 469 aaKnown RBP4.65□□□□□ -1.67
CAF4YKR036C HSL7P38274 827 aa4.65□□□□□ -1.67
CAF4YKR036C MRPS18P42847 217 aa4.65□□□□□ -1.67
CAF4YKR036C TIM54P47045 478 aa4.65□□□□□ -1.67
CAF4YKR036C YJR030CP47101 745 aa4.65□□□□□ -1.67
CAF4YKR036C YGR053CP53234 283 aa4.65□□□□□ -1.67
CAF4YKR036C MKC7P53379 596 aa4.65□□□□□ -1.67
CAF4YKR036C PEX25Q02969 394 aa4.65□□□□□ -1.67
CAF4YKR036C PLM2Q04383 521 aa4.65□□□□□ -1.67
CAF4YKR036C YOL019WQ08157 551 aa4.65□□□□□ -1.67
CAF4YKR036C YLR108CQ12259 485 aa4.65□□□□□ -1.67
CAF4YKR036C YPL247CQ12523 523 aa4.65□□□□□ -1.67
CAF4YKR036C MTR10Q99189 972 aa4.65□□□□□ -1.67
CAF4YKR036C MRPL8P22353 238 aa4.64□□□□□ -1.67
CAF4YKR036C YCK2P23292 546 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C YCR101CP25607 182 aa4.64□□□□□ -1.67
CAF4YKR036C MCM10P32354 571 aa4.64□□□□□ -1.67
CAF4YKR036C GCD11P32481 527 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C SIP1P32578 815 aa4.64□□□□□ -1.67
CAF4YKR036C MRP4P32902 394 aa4.64□□□□□ -1.67
CAF4YKR036C RPF2P36160 344 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C APM3P38153 483 aa4.64□□□□□ -1.67
CAF4YKR036C ALG3P38179 458 aa4.64□□□□□ -1.67
CAF4YKR036C YBR238CP38330 731 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C DED81P38707 554 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C ERV46P39727 415 aa4.64□□□□□ -1.67
CAF4YKR036C RSP5P39940 809 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C RMD6P39975 231 aa4.64□□□□□ -1.67
CAF4YKR036C MEP1P40260 492 aa4.64□□□□□ -1.67
CAF4YKR036C COA1P40452 197 aa4.64□□□□□ -1.67
CAF4YKR036C ULI1P43604 169 aa4.64□□□□□ -1.67
CAF4YKR036C AIM22P47051 409 aa4.64□□□□□ -1.67
CAF4YKR036C MPC1P53157 130 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C ERV14P53173 138 aa4.64□□□□□ -1.67
CAF4YKR036C PBP1P53297 722 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C OCA2P53949 197 aa4.64□□□□□ -1.67
CAF4YKR036C LEE1Q02799 301 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C YPL113CQ02961 396 aa4.64□□□□□ -1.67
CAF4YKR036C GPN3Q06543 272 aa4.64□□□□□ -1.67
CAF4YKR036C LUC7Q07508 261 aaPredicted RBP4.64□□□□□ -1.67
CAF4YKR036C FMP40Q08968 688 aaPredicted RBP4.64□□□□□ -1.67
CAF4YKR036C YLR126CQ12288 251 aa4.64□□□□□ -1.67
CAF4YKR036C GIS3Q12418 502 aa4.64□□□□□ -1.67
CAF4YKR036C PAA1Q12447 191 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C PCC1Q3E833 88 aa4.64□□□□□ -1.67
CAF4YKR036C HIS5P07172 385 aa4.64□□□□□ -1.67
CAF4YKR036C CHS1P08004 1131 aa4.64□□□□□ -1.67
CAF4YKR036C RPL4AP10664 362 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C PUT4P15380 627 aa4.64□□□□□ -1.67
CAF4YKR036C HNM1P19807 563 aa4.64□□□□□ -1.67
CAF4YKR036C PDE1P22434 369 aa4.64□□□□□ -1.67
CAF4YKR036C YCL068CP25593 260 aa4.64□□□□□ -1.67
CAF4YKR036C BUB2P26448 306 aaPredicted RBP4.64□□□□□ -1.67
CAF4YKR036C SRB6P32570 121 aa4.64□□□□□ -1.67
CAF4YKR036C SPO23P33757 523 aa4.64□□□□□ -1.67
CAF4YKR036C FLO10P36170 1169 aa4.64□□□□□ -1.67
CAF4YKR036C TAT1P38085 619 aa4.64□□□□□ -1.67
CAF4YKR036C YBR284WP38150 797 aa4.64□□□□□ -1.67
CAF4YKR036C LYS9P38999 446 aa4.64□□□□□ -1.67
CAF4YKR036C MNN1P39106 762 aa4.64□□□□□ -1.67
CAF4YKR036C DOT6P40059 670 aaKnown RBP4.64□□□□□ -1.67
CAF4YKR036C YIL166CP40445 542 aa4.64□□□□□ -1.67
CAF4YKR036C MND2P40577 368 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms