RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C GAB1P41733 394 aa3.32□□□□□ -1.88
VPS53YJL029C MEP2P41948 499 aa3.32□□□□□ -1.88
VPS53YJL029C OAZ1Q02803 292 aa3.32□□□□□ -1.88
VPS53YJL029C FMN1Q03778 218 aa3.32□□□□□ -1.88
VPS53YJL029C SFH1Q06168 426 aa3.32□□□□□ -1.88
VPS53YJL029C COS7Q07788 383 aa3.32□□□□□ -1.88
VPS53YJL029C YOR342CQ12182 319 aa3.32□□□□□ -1.88
VPS53YJL029C JLP1Q12358 412 aa3.32□□□□□ -1.88
VPS53YJL029C NOP58Q12499 511 aaKnown RBP3.32□□□□□ -1.88
VPS53YJL029C YKL068W-AQ3E826 78 aa3.32□□□□□ -1.88
VPS53YJL029C YPT6Q99260 215 aa3.32□□□□□ -1.88
VPS53YJL029C TY4B-PA0A0B7P3V8 1104 aa3.32□□□□□ -1.88
VPS53YJL029C AAC3P18238 307 aa3.32□□□□□ -1.88
VPS53YJL029C DAP2P18962 818 aa3.32□□□□□ -1.88
VPS53YJL029C GRR1P24814 1151 aa3.32□□□□□ -1.88
VPS53YJL029C NPP1P25353 742 aa3.32□□□□□ -1.88
VPS53YJL029C YCL049CP25577 312 aa3.32□□□□□ -1.88
VPS53YJL029C CWH43P25618 953 aa3.32□□□□□ -1.88
VPS53YJL029C DEP1P31385 405 aa3.32□□□□□ -1.88
VPS53YJL029C LYP1P32487 611 aa3.32□□□□□ -1.88
VPS53YJL029C YOR062CP36025 268 aa3.32□□□□□ -1.88
VPS53YJL029C RRN3P36070 627 aa3.32□□□□□ -1.88
VPS53YJL029C KAE1P36132 386 aa3.32□□□□□ -1.88
VPS53YJL029C MCM7P38132 845 aa3.32□□□□□ -1.88
VPS53YJL029C COS111P38308 924 aa3.32□□□□□ -1.88
VPS53YJL029C CHS7P38843 316 aa3.32□□□□□ -1.88
VPS53YJL029C SHU2P38957 223 aa3.32□□□□□ -1.88
VPS53YJL029C TRS85P46944 698 aa3.32□□□□□ -1.88
VPS53YJL029C RPS12P48589 143 aaKnown RBP3.32□□□□□ -1.88
VPS53YJL029C MUP1P50276 574 aa3.32□□□□□ -1.88
VPS53YJL029C UBC9P50623 157 aaPredicted RBP3.32□□□□□ -1.88
VPS53YJL029C DIA3P52290 468 aa3.32□□□□□ -1.88
VPS53YJL029C RHO4Q00246 291 aa3.32□□□□□ -1.88
VPS53YJL029C REC102Q02721 264 aa3.32□□□□□ -1.88
VPS53YJL029C SRP1Q02821 542 aaKnown RBP3.32□□□□□ -1.88
VPS53YJL029C MET31Q03081 177 aa3.32□□□□□ -1.88
VPS53YJL029C GLO2Q05584 274 aa3.32□□□□□ -1.88
VPS53YJL029C GMC2Q06201 188 aa3.32□□□□□ -1.88
VPS53YJL029C YEH2Q07950 538 aa3.32□□□□□ -1.88
VPS53YJL029C FDH1Q08911 376 aa3.32□□□□□ -1.88
VPS53YJL029C NSL1Q12143 216 aa3.32□□□□□ -1.88
VPS53YJL029C NSI1Q12457 570 aa3.32□□□□□ -1.88
VPS53YJL029C MDM12Q92328 271 aa3.32□□□□□ -1.88
VPS53YJL029C YOR019WQ99248 730 aa3.32□□□□□ -1.88
VPS53YJL029C RPL43AP0CX25 92 aaKnown RBP3.31□□□□□ -1.88
VPS53YJL029C RPL43BP0CX26 92 aa3.31□□□□□ -1.88
VPS53YJL029C DMC1P25453 334 aa3.31□□□□□ -1.88
VPS53YJL029C MXR2P25566 168 aa3.31□□□□□ -1.88
VPS53YJL029C CSM1P25651 190 aa3.31□□□□□ -1.88
VPS53YJL029C NAM9P27929 486 aa3.31□□□□□ -1.88
VPS53YJL029C VPS41P38959 992 aa3.31□□□□□ -1.88
VPS53YJL029C YEL020CP39994 560 aa3.31□□□□□ -1.88
VPS53YJL029C YJL043WP47053 257 aa3.31□□□□□ -1.88
VPS53YJL029C SEH1P53011 349 aaKnown RBP3.31□□□□□ -1.88
VPS53YJL029C YOR376WQ08900 122 aa3.31□□□□□ -1.88
VPS53YJL029C PHO2P07269 559 aa3.31□□□□□ -1.88
VPS53YJL029C TOP3P13099 656 aa3.31□□□□□ -1.88
VPS53YJL029C PHO81P17442 1178 aa3.31□□□□□ -1.88
VPS53YJL029C RPC19P28000 142 aaKnown RBP3.31□□□□□ -1.88
VPS53YJL029C VPS51P36116 164 aa3.31□□□□□ -1.88
VPS53YJL029C AMN1P38285 549 aaPredicted RBP3.31□□□□□ -1.88
VPS53YJL029C ARB1P40024 610 aaKnown RBP3.31□□□□□ -1.88
VPS53YJL029C TPA1P40032 644 aaKnown RBP3.31□□□□□ -1.88
VPS53YJL029C PKP1P40530 394 aa3.31□□□□□ -1.88
VPS53YJL029C FMP32P43557 207 aa3.31□□□□□ -1.88
VPS53YJL029C YGR067CP53243 804 aa3.31□□□□□ -1.88
VPS53YJL029C YLR460CP54007 376 aa3.31□□□□□ -1.88
VPS53YJL029C SVL3Q03088 825 aaKnown RBP3.31□□□□□ -1.88
VPS53YJL029C YDR476CQ03362 224 aa3.31□□□□□ -1.88
VPS53YJL029C YDR209CQ03480 137 aa3.31□□□□□ -1.88
VPS53YJL029C NUP53Q03790 475 aa3.31□□□□□ -1.88
VPS53YJL029C YLR125WQ12138 136 aa3.31□□□□□ -1.88
VPS53YJL029C IRA1P18963 3092 aa3.31□□□□□ -1.88
VPS53YJL029C RAS2P01120 322 aaKnown RBP3.3□□□□□ -1.88
VPS53YJL029C CBP2P03874 630 aaPredicted RBP3.3□□□□□ -1.88
VPS53YJL029C ATP4P05626 244 aa3.3□□□□□ -1.88
VPS53YJL029C DST1P07273 309 aa3.3□□□□□ -1.88
VPS53YJL029C CAR2P07991 424 aaKnown RBP3.3□□□□□ -1.88
VPS53YJL029C CTR86P25355 563 aa3.3□□□□□ -1.88
VPS53YJL029C GPI16P38875 610 aa3.3□□□□□ -1.88
VPS53YJL029C HRB1P38922 454 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
VPS53YJL029C BPL1P48445 690 aaPredicted RBP3.3□□□□□ -1.88
VPS53YJL029C ATP22P50273 684 aaPredicted RBP3.3□□□□□ -1.88
VPS53YJL029C ARC35P53731 342 aaKnown RBP3.3□□□□□ -1.88
VPS53YJL029C MRL1Q06815 381 aa3.3□□□□□ -1.88
VPS53YJL029C YOR214CQ12282 236 aa3.3□□□□□ -1.88
VPS53YJL029C YGR161W-CQ3E744 92 aa3.3□□□□□ -1.88
VPS53YJL029C PUT2P07275 575 aa3.3□□□□□ -1.88
VPS53YJL029C YSF3P0C074 85 aaPredicted RBP3.3□□□□□ -1.88
VPS53YJL029C RNA1P11745 407 aaKnown RBP3.3□□□□□ -1.88
VPS53YJL029C ERG8P24521 451 aa3.3□□□□□ -1.88
VPS53YJL029C ATG14P38270 344 aa3.3□□□□□ -1.88
VPS53YJL029C MNN9P39107 395 aaKnown RBP3.3□□□□□ -1.88
VPS53YJL029C UTP25P40498 721 aaKnown RBP3.3□□□□□ -1.88
VPS53YJL029C IMA5P40884 581 aa3.3□□□□□ -1.88
VPS53YJL029C PTR3P43606 678 aa3.3□□□□□ -1.88
VPS53YJL029C BIT61P47041 543 aa3.3□□□□□ -1.88
VPS53YJL029C PAC10P48363 199 aa3.3□□□□□ -1.88
VPS53YJL029C YGL260WP53056 76 aa3.3□□□□□ -1.88
VPS53YJL029C ARI1P53111 347 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms