RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeast

Gene PRP38, Length 729 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP38	YGR075C	KAP120	Q02932	1032 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	ECM11	Q04110	302 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	COS7	Q07788	383 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	CMS1	Q07897	291 aa	Known RBP	2.62	□□□□□ -1.99
PRP38	YGR075C	SMC6	Q12749	1114 aa		2.62	□□□□□ -1.99
PRP38	YGR075C	HOM3	P10869	527 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	PRR1	P28708	518 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	PXA2	P34230	853 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	TIM17	P39515	158 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	ALD5	P40047	520 aa	Known RBP	2.61	□□□□□ -1.99
PRP38	YGR075C	CHS6	P40955	746 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	MST27	P53176	234 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	YGR018C	P53211	109 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	CRH1	P53301	507 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	YET2	Q04210	160 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	RTN1	Q04947	295 aa	Known RBP	2.61	□□□□□ -1.99
PRP38	YGR075C	DON1	Q05610	365 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	MDM36	Q06820	579 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	ISA2	Q12425	185 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	AFI1	Q99222	893 aa		2.61	□□□□□ -1.99
PRP38	YGR075C	IMA3	P0CW40	589 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	IMA4	P0CW41	589 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	DPH5	P32469	300 aa	Predicted RBP	2.6	□□□□□ -1.99
PRP38	YGR075C	NTC20	P38302	140 aa	Predicted RBP	2.6	□□□□□ -1.99
PRP38	YGR075C	OM14	P38325	134 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	CAK1	P43568	368 aa	Predicted RBP	2.6	□□□□□ -1.99
PRP38	YGR075C	TCB2	P48231	1178 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	SKO1	Q02100	647 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	CCE1	Q03702	353 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	AIM32	Q04689	311 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	IMA2	Q08295	589 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	ATG34	Q12292	412 aa		2.6	□□□□□ -1.99
PRP38	YGR075C	CPR2	P23285	205 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	ERV1	P27882	189 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	TFB1	P32776	642 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	PEX5	P35056	612 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	ANR2	P36090	516 aa	Predicted RBP	2.59	□□□□□ -1.99
PRP38	YGR075C	YBR056W	P38081	501 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	RRN10	P38204	145 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	LRP1	P38801	184 aa	Known RBP	2.59	□□□□□ -1.99
PRP38	YGR075C	LCB3	P47013	409 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	YGL138C	P53122	345 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	MKC7	P53379	596 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	CIK1	Q01649	594 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	URH1	Q04179	340 aa		2.59	□□□□□ -1.99
PRP38	YGR075C	SNT309	Q06091	175 aa	Predicted RBP	2.59	□□□□□ -1.99
PRP38	YGR075C	ADH1	P00330	348 aa	Known RBP	2.58	□□□□□ -2
PRP38	YGR075C	CBP6	P07253	162 aa	Predicted RBP	2.58	□□□□□ -2
PRP38	YGR075C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
PRP38	YGR075C	CDC50	P25656	391 aa		2.58	□□□□□ -2
PRP38	YGR075C	NIP1	P32497	812 aa	Known RBP	2.58	□□□□□ -2
PRP38	YGR075C	SLM4	P38247	162 aa		2.58	□□□□□ -2
PRP38	YGR075C	YHK8	P38776	514 aa		2.58	□□□□□ -2
PRP38	YGR075C	ZIM17	P42844	174 aa		2.58	□□□□□ -2
PRP38	YGR075C	TOM22	P49334	152 aa		2.58	□□□□□ -2
PRP38	YGR075C	YPS5	P53057	165 aa		2.58	□□□□□ -2
PRP38	YGR075C	VPS9	P54787	451 aa		2.58	□□□□□ -2
PRP38	YGR075C	ACL4	Q03771	387 aa		2.58	□□□□□ -2
PRP38	YGR075C	MMR1	Q06324	491 aa		2.58	□□□□□ -2
PRP38	YGR075C	RRP9	Q06506	573 aa	Known RBP	2.58	□□□□□ -2
PRP38	YGR075C	MFG1	Q07684	458 aa		2.58	□□□□□ -2
PRP38	YGR075C	DIS3	Q08162	1001 aa	Known RBP	2.58	□□□□□ -2
PRP38	YGR075C	BI3	Q9ZZW7	517 aa		2.58	□□□□□ -2
PRP38	YGR075C	URA4	P20051	364 aa		2.57	□□□□□ -2
PRP38	YGR075C	CYS4	P32582	507 aa	Known RBP	2.57	□□□□□ -2
PRP38	YGR075C	BMT2	P38278	337 aa		2.57	□□□□□ -2
PRP38	YGR075C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
PRP38	YGR075C	RPT4	P53549	437 aa	Known RBP	2.57	□□□□□ -2
PRP38	YGR075C	HOT1	Q03213	719 aa		2.57	□□□□□ -2
PRP38	YGR075C	TDA1	Q03533	586 aa		2.57	□□□□□ -2
PRP38	YGR075C	YPR091C	Q06833	770 aa		2.57	□□□□□ -2
PRP38	YGR075C	MED2	Q12124	431 aa		2.57	□□□□□ -2
PRP38	YGR075C	TY1B-A	O13527	1196 aa	Known RBP	2.56	□□□□□ -2
PRP38	YGR075C	HSP82	P02829	709 aa	Known RBP	2.56	□□□□□ -2
PRP38	YGR075C	CAP2	P13517	287 aa		2.56	□□□□□ -2
PRP38	YGR075C	SRV2	P17555	526 aa	Known RBP	2.56	□□□□□ -2
PRP38	YGR075C	EXG1	P23776	448 aa	Known RBP	2.56	□□□□□ -2
PRP38	YGR075C	BRF1	P29056	596 aa		2.56	□□□□□ -2
PRP38	YGR075C	AIM24	P47127	394 aa		2.56	□□□□□ -2
PRP38	YGR075C	COS1	P53822	381 aa		2.56	□□□□□ -2
PRP38	YGR075C	YMR130W	Q04223	302 aa		2.56	□□□□□ -2
PRP38	YGR075C	DCS1	Q06151	350 aa		2.56	□□□□□ -2
PRP38	YGR075C	DPH2	P32461	534 aa		2.55	□□□□□ -2
PRP38	YGR075C	MMS4	P38257	691 aa		2.55	□□□□□ -2
PRP38	YGR075C	FLC3	P53121	802 aa		2.55	□□□□□ -2
PRP38	YGR075C	YGR111W	P53265	400 aa		2.55	□□□□□ -2
PRP38	YGR075C	IGO1	P53897	168 aa		2.55	□□□□□ -2
PRP38	YGR075C	OCA2	P53949	197 aa		2.55	□□□□□ -2
PRP38	YGR075C	YMR102C	Q03177	834 aa		2.55	□□□□□ -2
PRP38	YGR075C	SXM1	Q04175	944 aa	Known RBP	2.55	□□□□□ -2
PRP38	YGR075C	SMC5	Q08204	1093 aa		2.55	□□□□□ -2
PRP38	YGR075C	EAF3	Q12432	401 aa		2.55	□□□□□ -2
PRP38	YGR075C	COX3	P00420	269 aa		2.54	□□□□□ -2
PRP38	YGR075C	ADE4	P04046	510 aa	Known RBP	2.54	□□□□□ -2
PRP38	YGR075C	LTV1	P34078	463 aa		2.54	□□□□□ -2
PRP38	YGR075C	MRPL27	P36526	146 aa	Predicted RBP	2.54	□□□□□ -2
PRP38	YGR075C	SER3	P40054	469 aa		2.54	□□□□□ -2
PRP38	YGR075C	HAC1	P41546	238 aa		2.54	□□□□□ -2
PRP38	YGR075C	YGL262W	P53054	175 aa		2.54	□□□□□ -2
PRP38	YGR075C	STD1	Q02794	444 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms