RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W YBL029WP38201 376 aa3.19□□□□□ -1.9
SIZ1YDR409W PHO12P38693 467 aa3.19□□□□□ -1.9
SIZ1YDR409W YHK8P38776 514 aa3.19□□□□□ -1.9
SIZ1YDR409W VMA7P39111 118 aa3.19□□□□□ -1.9
SIZ1YDR409W SNX4P47057 423 aa3.19□□□□□ -1.9
SIZ1YDR409W MND1P53102 219 aa3.19□□□□□ -1.9
SIZ1YDR409W RHO5P53879 331 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W YNL146WP53906 100 aa3.19□□□□□ -1.9
SIZ1YDR409W IMP4P53941 290 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W TRS31Q03337 283 aa3.19□□□□□ -1.9
SIZ1YDR409W GAS3Q03655 524 aa3.19□□□□□ -1.9
SIZ1YDR409W SNU56Q03782 492 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W DLT1Q04216 342 aa3.19□□□□□ -1.9
SIZ1YDR409W DCS1Q06151 350 aa3.19□□□□□ -1.9
SIZ1YDR409W SGT1Q08446 395 aa3.19□□□□□ -1.9
SIZ1YDR409W NRT1Q08485 598 aa3.19□□□□□ -1.9
SIZ1YDR409W YOR022CQ12204 715 aa3.19□□□□□ -1.9
SIZ1YDR409W YOR012WQ12351 137 aa3.19□□□□□ -1.9
SIZ1YDR409W YPR1Q12458 312 aa3.19□□□□□ -1.9
SIZ1YDR409W FMP16Q12497 93 aa3.19□□□□□ -1.9
SIZ1YDR409W SRN2Q99176 213 aa3.19□□□□□ -1.9
SIZ1YDR409W AFI1Q99222 893 aa3.19□□□□□ -1.9
SIZ1YDR409W SUC2P00724 532 aa3.18□□□□□ -1.9
SIZ1YDR409W YML003WP0CF16 290 aa3.18□□□□□ -1.9
SIZ1YDR409W HSP26P15992 214 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9 RIP-Chip
SIZ1YDR409W DBF2P22204 572 aa3.18□□□□□ -1.9
SIZ1YDR409W YCL068CP25593 260 aa3.18□□□□□ -1.9
SIZ1YDR409W CPR3P25719 182 aa3.18□□□□□ -1.9
SIZ1YDR409W MRPL6P32904 214 aa3.18□□□□□ -1.9
SIZ1YDR409W FSH1P38777 243 aaKnown RBP3.18□□□□□ -1.9
SIZ1YDR409W YHR182WP38870 785 aa3.18□□□□□ -1.9
SIZ1YDR409W AIM18P38884 321 aa3.18□□□□□ -1.9
SIZ1YDR409W RBG1P39729 369 aa3.18□□□□□ -1.9
SIZ1YDR409W MTW1P39731 289 aa3.18□□□□□ -1.9
SIZ1YDR409W AIM10P39965 576 aaKnown RBP3.18□□□□□ -1.9
SIZ1YDR409W YNL195CP40168 261 aa3.18□□□□□ -1.9
SIZ1YDR409W RRT5P43607 289 aa3.18□□□□□ -1.9
SIZ1YDR409W YJL181WP46987 611 aa3.18□□□□□ -1.9
SIZ1YDR409W ASG7P46993 209 aa3.18□□□□□ -1.9
SIZ1YDR409W PNC1P53184 216 aaKnown RBP3.18□□□□□ -1.9
SIZ1YDR409W CPR8P53728 308 aa3.18□□□□□ -1.9
SIZ1YDR409W MRPS17Q03246 237 aaPredicted RBP3.18□□□□□ -1.9
SIZ1YDR409W DOT1Q04089 582 aaKnown RBP3.18□□□□□ -1.9
SIZ1YDR409W TRM12Q04235 462 aa3.18□□□□□ -1.9
SIZ1YDR409W YLR031WQ07978 186 aa3.18□□□□□ -1.9
SIZ1YDR409W DIS3Q08162 1001 aaKnown RBP3.18□□□□□ -1.9
SIZ1YDR409W FMP40Q08968 688 aaPredicted RBP3.18□□□□□ -1.9
SIZ1YDR409W HOS1Q12214 470 aa3.18□□□□□ -1.9
SIZ1YDR409W RTR2Q12378 196 aa3.18□□□□□ -1.9
SIZ1YDR409W YBR298C-AQ8TGK4 73 aa3.18□□□□□ -1.9
SIZ1YDR409W VPS63O13549 108 aa3.18□□□□□ -1.9
SIZ1YDR409W GPH1P06738 902 aaKnown RBP3.18□□□□□ -1.9
SIZ1YDR409W MET16P18408 261 aaPredicted RBP3.18□□□□□ -1.9
SIZ1YDR409W PPZ1P26570 692 aa3.18□□□□□ -1.9
SIZ1YDR409W PRR1P28708 518 aa3.18□□□□□ -1.9
SIZ1YDR409W PMT1P33775 817 aa3.18□□□□□ -1.9
SIZ1YDR409W SPC34P36131 295 aa3.18□□□□□ -1.9
SIZ1YDR409W NAT2P37293 288 aa3.18□□□□□ -1.9
SIZ1YDR409W GPX2P38143 162 aa3.18□□□□□ -1.9
SIZ1YDR409W STB5P38699 743 aa3.18□□□□□ -1.9
SIZ1YDR409W YHR078WP38799 552 aa3.18□□□□□ -1.9
SIZ1YDR409W COA1P40452 197 aa3.18□□□□□ -1.9
SIZ1YDR409W YIR007WP40566 764 aa3.18□□□□□ -1.9
SIZ1YDR409W FET4P40988 552 aa3.18□□□□□ -1.9
SIZ1YDR409W CAK1P43568 368 aaPredicted RBP3.18□□□□□ -1.9
SIZ1YDR409W COS12P53053 380 aa3.18□□□□□ -1.9
SIZ1YDR409W CWC25P53854 179 aaKnown RBP3.18□□□□□ -1.9
SIZ1YDR409W EOS1P53938 366 aa3.18□□□□□ -1.9
SIZ1YDR409W YKR011CQ02209 353 aa3.18□□□□□ -1.9
SIZ1YDR409W MUS81Q04149 632 aaPredicted RBP3.18□□□□□ -1.9
SIZ1YDR409W APC4Q04601 652 aa3.18□□□□□ -1.9
SIZ1YDR409W GPI11Q06636 219 aa3.18□□□□□ -1.9
SIZ1YDR409W YDL129WQ07555 291 aa3.18□□□□□ -1.9
SIZ1YDR409W TPO1Q07824 586 aa3.18□□□□□ -1.9
SIZ1YDR409W YDL109CQ12103 647 aa3.18□□□□□ -1.9
SIZ1YDR409W PFK27Q12471 397 aaPredicted RBP3.18□□□□□ -1.9
SIZ1YDR409W RIB3Q99258 208 aa3.18□□□□□ -1.9
SIZ1YDR409W SAS5Q99314 248 aa3.18□□□□□ -1.9
SIZ1YDR409W GAL10P04397 699 aa3.17□□□□□ -1.9
SIZ1YDR409W PMA1P05030 918 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W SAM35P14693 329 aa3.17□□□□□ -1.9
SIZ1YDR409W NSP1P14907 823 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W KGD2P19262 463 aaPredicted RBP3.17□□□□□ -1.9
SIZ1YDR409W PUP3P25451 205 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W IDH2P28241 369 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W LRG1P35688 1017 aa3.17□□□□□ -1.9
SIZ1YDR409W YKL077WP36081 392 aa3.17□□□□□ -1.9
SIZ1YDR409W YKL070WP36087 169 aa3.17□□□□□ -1.9
SIZ1YDR409W ARN2P38724 620 aa3.17□□□□□ -1.9
SIZ1YDR409W GIP4P39732 760 aa3.17□□□□□ -1.9
SIZ1YDR409W MPS3P47069 682 aa3.17□□□□□ -1.9
SIZ1YDR409W GCV1P48015 400 aa3.17□□□□□ -1.9
SIZ1YDR409W LSM3P57743 89 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W STD1Q02794 444 aa3.17□□□□□ -1.9
SIZ1YDR409W YPL034WQ03083 165 aa3.17□□□□□ -1.9
SIZ1YDR409W CSN9Q03981 162 aa3.17□□□□□ -1.9
SIZ1YDR409W PEX12Q04370 399 aa3.17□□□□□ -1.9
SIZ1YDR409W UPC2Q12151 913 aa3.17□□□□□ -1.9
SIZ1YDR409W PST2Q12335 198 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W YKL018C-AQ3E7A7 99 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms