RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C YJL107CP42947 387 aa3.21□□□□□ -1.9
CDC40YDR364C FET5P43561 622 aa3.21□□□□□ -1.9
CDC40YDR364C KTR6P54070 446 aa3.21□□□□□ -1.9
CDC40YDR364C YMR027WQ04371 470 aa3.21□□□□□ -1.9
CDC40YDR364C SPG3Q04398 127 aaPredicted RBP3.21□□□□□ -1.9
CDC40YDR364C TEN1Q07921 160 aa3.21□□□□□ -1.9
CDC40YDR364C FRE3Q08905 711 aa3.21□□□□□ -1.9
CDC40YDR364C LEA1Q08963 238 aaPredicted RBP3.21□□□□□ -1.9
CDC40YDR364C AEP3Q12089 606 aa3.21□□□□□ -1.9
CDC40YDR364C PSY3Q12318 242 aa3.21□□□□□ -1.9
CDC40YDR364C YDL007C-AQ2V2Q0 85 aa3.21□□□□□ -1.9
CDC40YDR364C EFG1Q3E705 233 aaKnown RBP3.21□□□□□ -1.9
CDC40YDR364C TEF1P02994 458 aaKnown RBP3.2□□□□□ -1.9
CDC40YDR364C PDE2P06776 526 aa3.2□□□□□ -1.9
CDC40YDR364C IMA3P0CW40 589 aa3.2□□□□□ -1.9
CDC40YDR364C IMA4P0CW41 589 aa3.2□□□□□ -1.9
CDC40YDR364C MET16P18408 261 aaPredicted RBP3.2□□□□□ -1.9
CDC40YDR364C URA4P20051 364 aa3.2□□□□□ -1.9
CDC40YDR364C MRPL25P23369 157 aa3.2□□□□□ -1.9
CDC40YDR364C GRR1P24814 1151 aa3.2□□□□□ -1.9
CDC40YDR364C PUP3P25451 205 aaKnown RBP3.2□□□□□ -1.9
CDC40YDR364C SNU114P36048 1008 aaKnown RBP3.2□□□□□ -1.9
CDC40YDR364C ADH5P38113 351 aaKnown RBP3.2□□□□□ -1.9
CDC40YDR364C PRM9P39551 298 aa3.2□□□□□ -1.9
CDC40YDR364C DSN1P40568 576 aa3.2□□□□□ -1.9
CDC40YDR364C RRT5P43607 289 aa3.2□□□□□ -1.9
CDC40YDR364C TRS85P46944 698 aa3.2□□□□□ -1.9
CDC40YDR364C CTK3P46963 296 aaPredicted RBP3.2□□□□□ -1.9
CDC40YDR364C COQ6P53318 479 aa3.2□□□□□ -1.9
CDC40YDR364C COP1P53622 1201 aaKnown RBP3.2□□□□□ -1.9
CDC40YDR364C PNG1Q02890 363 aa3.2□□□□□ -1.9
CDC40YDR364C YMR160WQ03823 816 aa3.2□□□□□ -1.9
CDC40YDR364C PIG1Q06216 648 aa3.2□□□□□ -1.9
CDC40YDR364C DBP9Q06218 594 aaKnown RBP3.2□□□□□ -1.9
CDC40YDR364C IMA2Q08295 589 aa3.2□□□□□ -1.9
CDC40YDR364C AAD15Q08361 143 aa3.2□□□□□ -1.9
CDC40YDR364C UAF30Q08747 228 aa3.2□□□□□ -1.9
CDC40YDR364C TFB5Q3E7C1 72 aaPredicted RBP3.2□□□□□ -1.9
CDC40YDR364C HIS1P00498 297 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C RPL31BP0C2H9 113 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C SPO7P18410 259 aa3.19□□□□□ -1.9
CDC40YDR364C PTC6P25646 442 aa3.19□□□□□ -1.9
CDC40YDR364C IDH2P28241 369 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C URA10P30402 227 aa3.19□□□□□ -1.9
CDC40YDR364C AFG1P32317 509 aa3.19□□□□□ -1.9
CDC40YDR364C SSE1P32589 693 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C RPL32P38061 130 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C ARA1P38115 344 aa3.19□□□□□ -1.9
CDC40YDR364C ECM13P38195 257 aa3.19□□□□□ -1.9
CDC40YDR364C GDT1P38301 280 aaPredicted RBP3.19□□□□□ -1.9
CDC40YDR364C URA8P38627 578 aaPredicted RBP3.19□□□□□ -1.9
CDC40YDR364C DBP8P38719 431 aa3.19□□□□□ -1.9
CDC40YDR364C FHL1P39521 936 aa3.19□□□□□ -1.9
CDC40YDR364C ATM1P40416 690 aa3.19□□□□□ -1.9
CDC40YDR364C NAS2P40555 220 aa3.19□□□□□ -1.9
CDC40YDR364C YIR016WP40572 265 aa3.19□□□□□ -1.9
CDC40YDR364C RPS10BP46784 105 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C YJL132WP47014 750 aa3.19□□□□□ -1.9
CDC40YDR364C VPS25P47142 202 aa3.19□□□□□ -1.9
CDC40YDR364C SCW4P53334 386 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C YPR003CP53394 754 aa3.19□□□□□ -1.9
CDC40YDR364C ATP23P53722 227 aa3.19□□□□□ -1.9
CDC40YDR364C SKO1Q02100 647 aa3.19□□□□□ -1.9
CDC40YDR364C PFA5Q03289 374 aa3.19□□□□□ -1.9
CDC40YDR364C HER2Q03557 464 aa3.19□□□□□ -1.9
CDC40YDR364C ACL4Q03771 387 aa3.19□□□□□ -1.9
CDC40YDR364C YMR130WQ04223 302 aa3.19□□□□□ -1.9
CDC40YDR364C RAD33Q04231 177 aa3.19□□□□□ -1.9
CDC40YDR364C EMI2Q04409 500 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C FAR8Q05040 523 aa3.19□□□□□ -1.9
CDC40YDR364C YOL159CQ08300 171 aa3.19□□□□□ -1.9
CDC40YDR364C RPS10AQ08745 105 aaPredicted RBP3.19□□□□□ -1.9
CDC40YDR364C YOR389WQ08912 624 aa3.19□□□□□ -1.9
CDC40YDR364C RTC5Q12108 567 aaKnown RBP3.19□□□□□ -1.9
CDC40YDR364C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
CDC40YDR364C HER1Q12276 1246 aa3.19□□□□□ -1.9
CDC40YDR364C NCA2Q12374 616 aa3.19□□□□□ -1.9
CDC40YDR364C SSC1P0CS90 654 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C RAP1P11938 827 aa3.18□□□□□ -1.9
CDC40YDR364C NOP1P15646 327 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C CLN1P20437 546 aa3.18□□□□□ -1.9
CDC40YDR364C YIM1P28625 365 aa3.18□□□□□ -1.9
CDC40YDR364C NDI1P32340 513 aa3.18□□□□□ -1.9
CDC40YDR364C RIB7P33312 244 aa3.18□□□□□ -1.9
CDC40YDR364C LOS1P33418 1100 aaPredicted RBP3.18□□□□□ -1.9
CDC40YDR364C ASK1P35734 292 aa3.18□□□□□ -1.9
CDC40YDR364C KAP104P38217 918 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C RFS1P38234 210 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C YBP1P38315 674 aa3.18□□□□□ -1.9
CDC40YDR364C IMD2P38697 523 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C SMF2P38778 549 aa3.18□□□□□ -1.9
CDC40YDR364C ANS1P38832 159 aa3.18□□□□□ -1.9
CDC40YDR364C FAD1P38913 306 aa3.18□□□□□ -1.9
CDC40YDR364C YEL028WP39989 153 aa3.18□□□□□ -1.9
CDC40YDR364C EDC3P39998 551 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C SER3P40054 469 aa3.18□□□□□ -1.9
CDC40YDR364C LSC1P53598 329 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C AQR1P53943 586 aa3.18□□□□□ -1.9
CDC40YDR364C ERG13P54839 491 aaKnown RBP3.18□□□□□ -1.9
CDC40YDR364C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms