RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	CAP2	P13517	287 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	CDC50	P25656	391 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	YKL097C	P34245	136 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	ATP3	P38077	311 aa	Known RBP	3.29	□□□□□ -1.88
RTG3	YBL103C	OM14	P38325	134 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	PTI1	P39927	425 aa	Predicted RBP	3.29	□□□□□ -1.88
RTG3	YBL103C	PGU1	P47180	361 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	STD1	Q02794	444 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	YMR102C	Q03177	834 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	ACL4	Q03771	387 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	ECM11	Q04110	302 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	SMC5	Q08204	1093 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	AFI1	Q99222	893 aa		3.29	□□□□□ -1.88
RTG3	YBL103C	CDC31	P06704	161 aa	Known RBP	3.28	□□□□□ -1.88
RTG3	YBL103C	RPN12	P32496	274 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	NIP1	P32497	812 aa	Known RBP	3.28	□□□□□ -1.88
RTG3	YBL103C	MRPS9	P38120	278 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	YGR018C	P53211	109 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	SFI1	Q12369	946 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	NCA2	Q12374	616 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	EAF3	Q12432	401 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	INH1	P01097	85 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	TIM17	P39515	158 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	LSM5	P40089	93 aa	Known RBP	3.28	□□□□□ -1.88
RTG3	YBL103C	MAM33	P40513	266 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	TOS3	P43637	560 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	YGR250C	P53316	781 aa	Known RBP	3.28	□□□□□ -1.88
RTG3	YBL103C	BNI5	P53890	448 aa	Known RBP	3.28	□□□□□ -1.88
RTG3	YBL103C	MFG1	Q07684	458 aa		3.28	□□□□□ -1.88
RTG3	YBL103C	ADH1	P00330	348 aa	Known RBP	3.27	□□□□□ -1.89
RTG3	YBL103C	ANR2	P36090	516 aa	Predicted RBP	3.27	□□□□□ -1.89
RTG3	YBL103C	YPS6	P40583	537 aa		3.27	□□□□□ -1.89
RTG3	YBL103C	COS1	P53822	381 aa		3.27	□□□□□ -1.89
RTG3	YBL103C	MMT1	Q03218	510 aa		3.27	□□□□□ -1.89
RTG3	YBL103C	IES4	Q08561	116 aa		3.27	□□□□□ -1.89
RTG3	YBL103C	NAG1	Q8TGN9	163 aa		3.27	□□□□□ -1.89
RTG3	YBL103C	NFU1	P32860	256 aa		3.26	□□□□□ -1.89
RTG3	YBL103C	YPS5	P53057	165 aa		3.26	□□□□□ -1.89
RTG3	YBL103C	MMR1	Q06324	491 aa		3.26	□□□□□ -1.89
RTG3	YBL103C	RRG1	Q12167	365 aa	Predicted RBP	3.26	□□□□□ -1.89
RTG3	YBL103C	NOC2	P39744	710 aa	Known RBP	3.25	□□□□□ -1.89
RTG3	YBL103C	MDM1	Q01846	1127 aa		3.25	□□□□□ -1.89
RTG3	YBL103C	SCM3	Q12334	223 aa		3.25	□□□□□ -1.89
RTG3	YBL103C	PIS1	P06197	220 aa	Known RBP	3.24	□□□□□ -1.89
RTG3	YBL103C	CBP6	P07253	162 aa	Predicted RBP	3.24	□□□□□ -1.89
RTG3	YBL103C	BYE1	P36106	594 aa		3.24	□□□□□ -1.89
RTG3	YBL103C	HEL1	P36113	551 aa		3.24	□□□□□ -1.89
RTG3	YBL103C	GPI18	P38211	433 aa		3.24	□□□□□ -1.89
RTG3	YBL103C	YNL208W	P40159	199 aa	Known RBP	3.24	□□□□□ -1.89
RTG3	YBL103C	CHS6	P40955	746 aa		3.24	□□□□□ -1.89
RTG3	YBL103C	LOT6	Q07923	191 aa		3.24	□□□□□ -1.89
RTG3	YBL103C	ARO3	P14843	370 aa	Known RBP	3.23	□□□□□ -1.89
RTG3	YBL103C	ALD5	P40047	520 aa	Known RBP	3.23	□□□□□ -1.89
RTG3	YBL103C	YER079W	P40052	210 aa	Known RBP	3.23	□□□□□ -1.89
RTG3	YBL103C	GAT2	P40209	560 aa		3.23	□□□□□ -1.89
RTG3	YBL103C	CLD1	P53264	445 aa		3.23	□□□□□ -1.89
RTG3	YBL103C	RPT4	P53549	437 aa	Known RBP	3.23	□□□□□ -1.89
RTG3	YBL103C	ALF1	P53904	254 aa		3.23	□□□□□ -1.89
RTG3	YBL103C	PRB1	P09232	635 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	FUR1	P18562	216 aa	Known RBP	3.22	□□□□□ -1.89
RTG3	YBL103C	ERV1	P27882	189 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	URA7	P28274	579 aa	Known RBP	3.22	□□□□□ -1.89
RTG3	YBL103C	CYS4	P32582	507 aa	Known RBP	3.22	□□□□□ -1.89
RTG3	YBL103C	YGL262W	P53054	175 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	AIM32	Q04689	311 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	YCR024C-B	Q3E7Z8	88 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	MTR10	Q99189	972 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	ASC1	P38011	319 aa	Known RBP	3.22	□□□□□ -1.89
RTG3	YBL103C	SLM4	P38247	162 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	PFS1	P38872	237 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	FLC3	P53121	802 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	RRP46	P53256	223 aa	Predicted RBP	3.22	□□□□□ -1.89
RTG3	YBL103C	SKI8	Q02793	397 aa	Predicted RBP	3.22	□□□□□ -1.89
RTG3	YBL103C	HOT1	Q03213	719 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	RPN9	Q04062	393 aa	Known RBP	3.22	□□□□□ -1.89
RTG3	YBL103C	VPS54	Q12071	889 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	MED2	Q12124	431 aa		3.22	□□□□□ -1.89
RTG3	YBL103C	ATP1	P07251	545 aa	Known RBP	3.21	□□□□□ -1.9
RTG3	YBL103C	ZRC1	P20107	442 aa		3.21	□□□□□ -1.9
RTG3	YBL103C	ADK2	P26364	225 aa		3.21	□□□□□ -1.9
RTG3	YBL103C	STP2	P38704	541 aa		3.21	□□□□□ -1.9
RTG3	YBL103C	SER3	P40054	469 aa		3.21	□□□□□ -1.9
RTG3	YBL103C	CAK1	P43568	368 aa	Predicted RBP	3.21	□□□□□ -1.9
RTG3	YBL103C	YPR091C	Q06833	770 aa		3.21	□□□□□ -1.9
RTG3	YBL103C	CEX1	Q12453	761 aa		3.21	□□□□□ -1.9
RTG3	YBL103C	CCH1	P50077	2039 aa		3.21	□□□□□ -1.9
RTG3	YBL103C	POM152	P39685	1337 aa		3.2	□□□□□ -1.9
RTG3	YBL103C	DST1	P07273	309 aa		3.2	□□□□□ -1.9
RTG3	YBL103C	SSC1	P0CS90	654 aa	Known RBP	3.2	□□□□□ -1.9
RTG3	YBL103C	YEF1	P32622	495 aa		3.2	□□□□□ -1.9
RTG3	YBL103C	VHS2	P40463	436 aa		3.2	□□□□□ -1.9
RTG3	YBL103C	IGD1	P43598	195 aa		3.2	□□□□□ -1.9
RTG3	YBL103C	TOM22	P49334	152 aa		3.2	□□□□□ -1.9
RTG3	YBL103C	TPS1	Q00764	495 aa	Known RBP	3.2	□□□□□ -1.9
RTG3	YBL103C	PRP42	Q03776	544 aa	Known RBP	3.2	□□□□□ -1.9
RTG3	YBL103C	PRM6	Q04705	352 aa		3.2	□□□□□ -1.9
RTG3	YBL103C	FOL3	Q12676	427 aa	Predicted RBP	3.2	□□□□□ -1.9
RTG3	YBL103C	SKN1	P33336	771 aa		3.19	□□□□□ -1.9
RTG3	YBL103C	MRPL27	P36526	146 aa	Predicted RBP	3.19	□□□□□ -1.9
RTG3	YBL103C	KTR6	P54070	446 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms