RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	OTU1	P43558	301 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	TRS85	P46944	698 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	ASN1	P49089	572 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	ASN2	P49090	572 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	RIB4	P50861	169 aa	Predicted RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	DBP6	P53734	629 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	TEX1	P53851	422 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	OCA2	P53949	197 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	SHR3	Q02774	210 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	YDR541C	Q03049	344 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	APC4	Q04601	652 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	NOP12	Q08208	459 aa	Known RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	NRT1	Q08485	598 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
YAL004W	YAL004W	TAF10	Q12030	206 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	TRM11	Q12463	433 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	DCP1	Q12517	231 aa	Predicted RBP	3.51	□□□□□ -1.85
YAL004W	YAL004W	CMC2	Q3E7A4	109 aa		3.51	□□□□□ -1.85
YAL004W	YAL004W	RAD1	P06777	1100 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	CDC21	P06785	304 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	MEK1	P24719	497 aa	Predicted RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	DAL2	P25335	343 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	PUP3	P25451	205 aa	Known RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	ILV6	P25605	309 aa	Known RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	HIR2	P32480	875 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	SIP1	P32578	815 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	RGT1	P32862	1170 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	CYM1	P32898	989 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	BUD2	P33314	1104 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	LOS1	P33418	1100 aa	Predicted RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
YAL004W	YAL004W	ASC1	P38011	319 aa	Known RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	MAL32	P38158	584 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	KAP104	P38217	918 aa	Known RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	SDH8	P38345	138 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	ARO9	P38840	513 aa	Predicted RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	YHR182W	P38870	785 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	UIP3	P39547	235 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	SAP1	P39955	897 aa	Known RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	ARG2	P40360	574 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	FMC1	P40491	155 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	PTR3	P43606	678 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	DPB11	P47027	764 aa	Predicted RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	AIM22	P47051	409 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	ORC5	P50874	479 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	ROG1	P53118	685 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	DRN1	P53255	507 aa	Known RBP	3.5	□□□□□ -1.85
YAL004W	YAL004W	COQ6	P53318	479 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	MAL12	P53341	584 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	SPC98	P53540	846 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	SLD5	Q03406	294 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	BTS1	Q12051	335 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	BAG7	Q12128	409 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	GLE1	Q12315	538 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	NCA2	Q12374	616 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	FMP16	Q12497	93 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	SEY1	Q99287	776 aa		3.5	□□□□□ -1.85
YAL004W	YAL004W	PUT2	P07275	575 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	HEM15	P16622	393 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	RVS161	P25343	265 aa	Known RBP	3.49	□□□□□ -1.85
YAL004W	YAL004W	YUR1	P26725	428 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	RAD14	P28519	371 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	ATP11	P32453	318 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	STE14	P32584	239 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	SKG6	P32900	734 aa	Predicted RBP	3.49	□□□□□ -1.85
YAL004W	YAL004W	YKL071W	P36086	256 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	ICS2	P38284	255 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	PCA1	P38360	1216 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	IMD2	P38697	523 aa	Known RBP	3.49	□□□□□ -1.85
YAL004W	YAL004W	PIG2	P40187	538 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	YMR134W	P40207	237 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	URM1	P40554	99 aa	Predicted RBP	3.49	□□□□□ -1.85
YAL004W	YAL004W	SNZ3	P43545	298 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
YAL004W	YAL004W	SNZ2	P53824	298 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	IST1	P53843	298 aa	Predicted RBP	3.49	□□□□□ -1.85
YAL004W	YAL004W	SLT2	Q00772	484 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	RLI1	Q03195	608 aa	Known RBP	3.49	□□□□□ -1.85
YAL004W	YAL004W	YMR160W	Q03823	816 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	BNA7	Q04066	261 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	YMR310C	Q04867	317 aa	Predicted RBP	3.49	□□□□□ -1.85
YAL004W	YAL004W	YDR278C	Q05612	105 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	THI7	Q05998	598 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	MRPL35	Q06678	367 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	INP53	Q12271	1107 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	RRD2	Q12461	358 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	YOS9	Q99220	542 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	HKR1	P41809	1802 aa		3.49	□□□□□ -1.85
YAL004W	YAL004W	COX4	P04037	155 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	RAD10	P06838	210 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	ASP3-2	P0CX77	362 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	ASP3-3	P0CX78	362 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	ASP3-4	P0CX79	362 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	ASP3-1	P0CZ17	362 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	YPK1	P12688	680 aa	Known RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	PRP16	P15938	1071 aa	Predicted RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	YPK2	P18961	677 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	BCS1	P32839	456 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	SOF1	P33750	489 aa	Known RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	VHC1	P38329	1120 aa		3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms