RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 CRY2Q49AN0 593 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 ZFPM1Q8IX07 1006 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 BCAS4Q8TDM0 211 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 EMILIN3Q9NT22 766 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 TRPC5Q9UL62 973 aaPredicted RBP8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 ATF5Q9Y2D1 282 aaPredicted RBP8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 LTBP1Q14766 1721 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 GOLGA8KD6RF30 607 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 ZBTB5O15062 677 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 RAD51CO43502 376 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 SLC12A3P55017 1021 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 NFIAQ12857 509 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 HYIQ5T013 277 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 ZNF571Q7Z3V5 609 aaPredicted RBP8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 KLHL7Q8IXQ5 586 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 RBM46Q8TBY0 533 aaKnown RBP8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 EDEM3Q9BZQ6 932 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 USP21Q9UK80 565 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 PCDHAC2Q9Y5I4 1007 aa8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 GREB1LQ9C091 1923 aaPredicted RBP8.8□□□□□ -1
TNFRSF10B-208ENST00000523752 SMCHD1A6NHR9 2005 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 HSF2BPO75031 334 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 CLSTN1O94985 981 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 ATP2B4P23634 1241 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 NR2F2P24468 414 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 POLD1P28340 1107 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 SLC30A10Q6XR72 485 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 RUBCNQ92622 972 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 SYN2Q92777 582 aaPredicted RBP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 CEP63Q96MT8 703 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 DNAJC18Q9H819 358 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 SERPINB13Q9UIV8 391 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 RSPH10B2B2RC85 870 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 RSPH10BP0C881 870 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 EPB41P11171 864 aaKnown RBP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 NOP2P46087 812 aaKnown RBP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 CACNB3P54284 484 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 KCNA1Q09470 495 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 PABPC4Q13310 644 aaKnown RBP eCLIP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 NNTQ13423 1086 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 QRICH1Q2TAL8 776 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 GJB7Q6PEY0 223 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 IRF2BP2Q7Z5L9 587 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 CERS3Q8IU89 383 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 CCDC65Q8IXS2 484 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 IQCKQ8N0W5 287 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 KCNMB3Q9NPA1 279 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 AIPL1Q9NZN9 384 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 HDAC9Q9UKV0 1011 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 MYBP10242 640 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 CHRM1P11229 460 aaPredicted RBP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 ECHS1P30084 290 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 GUCY1A3Q02108 690 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 SPIRE1Q08AE8 756 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 ASIC2Q16515 512 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 PPP1R18Q6NYC8 613 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 FOXR2Q6PJQ5 311 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 DDX42Q86XP3 938 aaKnown RBP eCLIP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 CATSPER3Q86XQ3 398 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 IFT20Q8IY31 132 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 RNPC3Q96LT9 517 aaKnown RBP8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 LRRC27Q9C0I9 530 aa8.79□□□□□ -1
TNFRSF10B-208ENST00000523752 KIF13BQ9NQT8 1826 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 KDM3AQ9Y4C1 1321 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 SIPA1L1O43166 1804 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 FRMD3A2A2Y4 597 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 KCNK3O14649 394 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 CASP4P49662 377 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 MRPL12P52815 198 aaKnown RBP8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 ERVK-9P63128 1117 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 ALS2CLQ60I27 953 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 SFR1Q86XK3 245 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 ZC3H3Q8IXZ2 948 aaKnown RBP8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 USP38Q8NB14 1042 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 REEP2Q9BRK0 252 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 AP1M1Q9BXS5 423 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 ANO3Q9BYT9 981 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 NT5C3AQ9H0P0 336 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 DHX36Q9H2U1 1008 aaKnown RBP8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 FAM169AQ9Y6X4 670 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 OPA1O60313 960 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 ZEB2O60315 1214 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 AKAP3O75969 853 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 SERPINB2P05120 415 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 GYS1P13807 737 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 UCHL3P15374 230 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 LIG3P49916 1009 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 CYP4A11Q02928 519 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 GIT2Q14161 759 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 SEPT2Q15019 361 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 GLE1Q53GS7 698 aaKnown RBP8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 PRR16Q569H4 304 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 DCAF17Q5H9S7 520 aaPredicted RBP8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 TRMT1LQ7Z2T5 733 aaKnown RBP8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 OR2W6PQ8NHA6 318 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 KAT2BQ92831 832 aa8.78□□□□□ -1
TNFRSF10B-208ENST00000523752 NEUROG2Q9H2A3 272 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms