RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 MAGEF1Q9HAY2 307 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 MYH9P35579 1960 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 C5orf58C9J3I9 102 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 RALAP11233 206 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 HOXD10P28358 340 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 FCHO2Q0JRZ9 810 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 AP1B1Q10567 949 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 ARHGEF25Q86VW2 580 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 ANKLE2Q86XL3 938 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 GPIHBP1Q8IV16 184 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 EFCAB1Q9HAE3 211 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PARP3Q9Y6F1 533 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 B2RBV5 119 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 E2F6O75461 281 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 NR1D1P20393 614 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 TMPOP42166 694 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 DNA2P51530 1060 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 TNFAIP2Q03169 654 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CYLC2Q14093 348 aaPredicted RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 TAB1Q15750 504 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 KRT27Q7Z3Y8 459 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 STX12Q86Y82 276 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 MDM1Q8TC05 714 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SCFD1Q8WVM8 642 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 MTERF3Q96E29 417 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CABS1Q96KC9 395 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SIKE1Q9BRV8 207 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 NCAPD3P42695 1498 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 FAM135AQ9P2D6 1515 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 KMOO15229 486 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SNAPC5O75971 98 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 ITGAXP20702 1163 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CHMLP26374 656 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 RPS6KA3P51812 740 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SGO2Q562F6 1265 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 FAM180AQ6UWF9 173 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 EFL1Q7Z2Z2 1120 aaKnown RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 ANKRD49Q8WVL7 239 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 ARHGAP45Q92619 1136 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 USP13Q92995 863 aaPredicted RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 ARHGAP28Q9P2N2 729 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CSADQ9Y600 493 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 AKNAQ7Z591 1439 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 DPYSL4O14531 572 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 EXOC3O60645 756 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SUPT3HO75486 399 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SASH3O75995 380 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 SNCGO76070 127 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CYP19A1P11511 503 aaPredicted RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 VCLP18206 1134 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 STAT5AP42229 794 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 STAT5BP51692 787 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PLTPP55058 493 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 HIST2H2ACQ16777 129 aaPredicted RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 MTFR2Q6P444 385 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PROSER2Q86WR7 435 aaPredicted RBP5.81□□□□□ -1.48
USF3-202ENST00000478658 SKAP1Q86WV1 359 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 PARP9Q8IXQ6 854 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 MGARPQ8TDB4 240 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 INPP5DQ92835 1189 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CHAMP1Q96JM3 812 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 H2AFJQ9BTM1 129 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 RACGAP1Q9H0H5 632 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 TRIM39Q9HCM9 518 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 RAD18Q9NS91 495 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 MRFAP1Q9Y605 127 aa5.81□□□□□ -1.48
USF3-202ENST00000478658 CLASP2O75122 1294 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 RGS8P57771 180 aaPredicted RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 POSTNQ15063 836 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 STK17AQ9UEE5 414 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 HPS5Q9UPZ3 1129 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 SMIM31A0A1B0GVY4 71 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 S100A7P31151 101 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 MTA1Q13330 715 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 KRT24Q2M2I5 525 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 KIAA2013Q8IYS2 634 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 THEM5Q8N1Q8 247 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 RASGEF1AQ8N9B8 481 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TMBIM4Q9HC24 238 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 NRBP1Q9UHY1 535 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 PALD1Q9ULE6 856 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 DIAPH2O60879 1101 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 PTPN1P18031 435 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 DNAJC3Q13217 504 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ACAD11Q709F0 780 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 CCDC36Q8IYA8 594 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 RYBPQ8N488 228 aaPredicted RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 CDHR1Q96JP9 859 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 HIST1H2AHQ96KK5 128 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 HIST1H2AJQ99878 128 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 UBE2OQ9C0C9 1292 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 GOLPH3LQ9H4A5 285 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 RIBC2Q9H4K1 309 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 CARMIL1Q5VZK9 1371 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 LRRIQ4A6NIV6 560 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 SMIM22K7EJ46 135 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 MCF2LO15068 1137 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 GFPT2O94808 682 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 KRT1P04264 644 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 SERPINB4P48594 390 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms