RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 SETD4Q9NVD3 440 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 CEP131Q9UPN4 1083 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 SQORQ9Y6N5 450 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 KIAA1217Q5T5P2 1943 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 WDR64B1ANS9 1081 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 BACH1O14867 736 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 KCNJ6P48051 423 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 JAK3P52333 1124 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
FDPS-208ENST00000470171 RABEP1Q15276 862 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 GRIK4Q16099 956 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 FAM26DQ5JW98 314 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 PPP4R3AQ6IN85 833 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 USP38Q8NB14 1042 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 LMBR1Q8WVP7 490 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 FAM167AQ96KS9 214 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 MBOAT7Q96N66 472 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 MTMR10Q9NXD2 777 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 PKD2L1Q9P0L9 805 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 STXBP5LQ9Y2K9 1186 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
FDPS-208ENST00000470171 POTEB3A0JP26 581 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 TBX3O15119 743 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 TREHO43280 583 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 ST18O60284 1047 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 ATP2A2P16615 1042 aaKnown RBP17.48■□□□□ 0.39
FDPS-208ENST00000470171 DNAJB2P25686 324 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 MCM2P49736 904 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 ZNF484Q5JVG2 852 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 ZNF618Q5T7W0 954 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 IER5Q5VY09 327 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 POTEBQ6S5H4 581 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 DEFB128Q7Z7B8 93 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 ATP8B4Q8TF62 1192 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 BBXQ8WY36 941 aaPredicted RBP17.48■□□□□ 0.39
FDPS-208ENST00000470171 TIFAQ96CG3 184 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 FAM20AQ96MK3 541 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 SEMA6BQ9H3T3 888 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 ZNF302Q9NR11 478 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 TUBE1Q9UJT0 475 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 MAFBQ9Y5Q3 323 aaPredicted RBP17.48■□□□□ 0.39
FDPS-208ENST00000470171 COL1A2P08123 1366 aa17.48■□□□□ 0.39
FDPS-208ENST00000470171 ZBBXA8MT70 800 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 DKC1O60832 514 aaKnown RBP eCLIP17.47■□□□□ 0.39
FDPS-208ENST00000470171 GAS7O60861 476 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 CTDNEP1O95476 244 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 SAFBQ15424 915 aaKnown RBP eCLIP17.47■□□□□ 0.39
FDPS-208ENST00000470171 PDXDC2PQ6P474 469 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 NEK8Q86SG6 692 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 TRIM50Q86XT4 487 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 SEPT8Q92599 483 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 SLC5A5Q92911 643 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 LENG9Q96B70 501 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 PCYT2Q99447 389 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 TEKT3Q9BXF9 490 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 PCDHA2Q9Y5H9 948 aa17.47■□□□□ 0.39
FDPS-208ENST00000470171 M0QZ92 97 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 MSH4O15457 936 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 CCNE2O96020 404 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 INSRRP14616 1297 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 KRT2P35908 639 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 ZNF200P98182 395 aaPredicted RBP17.46■□□□□ 0.39
FDPS-208ENST00000470171 PLCB4Q15147 1175 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 NPY5RQ15761 445 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 ODR4Q5SWX8 454 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 LRCH2Q5VUJ6 765 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
FDPS-208ENST00000470171 VWCEQ96DN2 955 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 SLC28A3Q9HAS3 691 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 NRBP2Q9NSY0 501 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 CXXC1Q9P0U4 656 aaPredicted RBP17.46■□□□□ 0.39
FDPS-208ENST00000470171 SAMM50Q9Y512 469 aa17.46■□□□□ 0.39
FDPS-208ENST00000470171 LAMA3Q16787 3333 aa17.46■□□□□ 0.38
FDPS-208ENST00000470171 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 MAGEB2O15479 319 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 NBNO60934 754 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 CDC42EP1Q00587 391 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 SWSAP1Q6NVH7 229 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 TRAF7Q6Q0C0 670 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 PBX4Q9BYU1 374 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 DISC1Q9NRI5 854 aa17.45■□□□□ 0.38
FDPS-208ENST00000470171 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
FDPS-208ENST00000470171 DDX25Q9UHL0 483 aaKnown RBP17.45■□□□□ 0.38
FDPS-208ENST00000470171 BAG4O95429 457 aaKnown RBP17.44■□□□□ 0.38
FDPS-208ENST00000470171 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
FDPS-208ENST00000470171 MARK3P27448 753 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 HIC1Q14526 733 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 PLEKHG4Q58EX7 1191 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 MARCH8Q5T0T0 291 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 EXOC8Q8IYI6 725 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 NECAB1Q8N987 351 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 AIFM3Q96NN9 605 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 ZNF576Q9H609 170 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 KCNJ14Q9UNX9 436 aa17.44■□□□□ 0.38
FDPS-208ENST00000470171 PPME1Q9Y570 386 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms