RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 CYBAP13498 195 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 TNFAIP2Q03169 654 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 LAMC2Q13753 1193 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 GJC2Q5T442 439 aaPredicted RBP23.61■■□□□ 1.37
VPS13B-204ENST00000441350 KANK3Q6NY19 840 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 SH3RF1Q7Z6J0 888 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 TPH2Q8IWU9 490 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 BANK1Q8NDB2 785 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 PXYLP1Q8TE99 480 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 LXNQ9BS40 222 aa23.61■■□□□ 1.37
VPS13B-204ENST00000441350 WRAP73Q9P2S5 460 aaPredicted RBP23.61■■□□□ 1.37
VPS13B-204ENST00000441350 IGKV6D-21A0A0A0MT36 114 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 ELNP15502 786 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 PTGS1P23219 599 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 QARSP47897 775 aaKnown RBP23.6■■□□□ 1.37
VPS13B-204ENST00000441350 MDM2Q00987 491 aaPredicted RBP23.6■■□□□ 1.37
VPS13B-204ENST00000441350 HSDL1Q3SXM5 330 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 MIS18BP1Q6P0N0 1132 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 RAET1EQ8TD07 263 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 SEPT1Q8WYJ6 367 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 SPATA33Q96N06 139 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 GPR20Q99678 358 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 TNMDQ9H2S6 317 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 MAGEF1Q9HAY2 307 aa23.6■■□□□ 1.37
VPS13B-204ENST00000441350 CTAGE5O15320 804 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 LYPLA2O95372 231 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 UGCGQ16739 394 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 RBM43Q6ZSC3 357 aaKnown RBP23.59■■□□□ 1.37
VPS13B-204ENST00000441350 RAD54LQ92698 747 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 PAGE5Q96GU1 130 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 MTRQ99707 1265 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 ZSWIM4Q9H7M6 989 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 KBTBD4Q9NVX7 518 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 GNEQ9Y223 722 aaKnown RBP23.59■■□□□ 1.37
VPS13B-204ENST00000441350 FOXN1O15353 648 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 PSMC5P62195 406 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 PSMC6P62333 389 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 CACNB2Q08289 660 aaPredicted RBP23.59■■□□□ 1.37
VPS13B-204ENST00000441350 TRIM32Q13049 653 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 CCDC60Q8IWA6 550 aaPredicted RBP23.59■■□□□ 1.37
VPS13B-204ENST00000441350 FAM184BQ9ULE4 1060 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 TRIM17Q9Y577 477 aa23.59■■□□□ 1.37
VPS13B-204ENST00000441350 E9PMD0 336 aa23.58■■□□□ 1.36
VPS13B-204ENST00000441350 HMGCRP04035 888 aa23.58■■□□□ 1.36
VPS13B-204ENST00000441350 SWSAP1Q6NVH7 229 aa23.58■■□□□ 1.36
VPS13B-204ENST00000441350 C4orf19Q8IY42 314 aa23.58■■□□□ 1.36
VPS13B-204ENST00000441350 LARP4BQ92615 738 aaKnown RBP23.58■■□□□ 1.36
VPS13B-204ENST00000441350 CCDC34Q96HJ3 373 aa23.58■■□□□ 1.36
VPS13B-204ENST00000441350 GABBR1Q9UBS5 961 aa23.58■■□□□ 1.36
VPS13B-204ENST00000441350 DNM3Q9UQ16 869 aa23.58■■□□□ 1.36
VPS13B-204ENST00000441350 NOP56O00567 594 aaKnown RBP23.57■■□□□ 1.36
VPS13B-204ENST00000441350 TCF7P36402 384 aaPredicted RBP23.57■■□□□ 1.36
VPS13B-204ENST00000441350 ZSCAN23Q3MJ62 389 aa23.57■■□□□ 1.36
VPS13B-204ENST00000441350 MAP3K21Q5TCX8 1036 aa23.57■■□□□ 1.36
VPS13B-204ENST00000441350 GRAMD1CQ8IYS0 662 aa23.57■■□□□ 1.36
VPS13B-204ENST00000441350 PPTC7Q8NI37 304 aa23.57■■□□□ 1.36
VPS13B-204ENST00000441350 ATP6V0A1Q93050 837 aa23.57■■□□□ 1.36
VPS13B-204ENST00000441350 NACC1Q96RE7 527 aa23.57■■□□□ 1.36
VPS13B-204ENST00000441350 PCYT2Q99447 389 aa23.57■■□□□ 1.36
VPS13B-204ENST00000441350 HOOK1Q9UJC3 728 aaKnown RBP23.57■■□□□ 1.36
VPS13B-204ENST00000441350 MAFBQ9Y5Q3 323 aaPredicted RBP23.57■■□□□ 1.36
VPS13B-204ENST00000441350 IGSF9BQ9UPX0 1349 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 MYH9P35579 1960 aaKnown RBP23.56■■□□□ 1.36
VPS13B-204ENST00000441350 A0A087WWV3 80 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 LGR5O75473 907 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 AKR1A1P14550 325 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 AFMP43652 599 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 MCM6Q14566 821 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 POSTNQ15063 836 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 STAMQ92783 540 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 GZF1Q9H116 711 aaPredicted RBP23.56■■□□□ 1.36
VPS13B-204ENST00000441350 Q9Y3F1 56 aa23.56■■□□□ 1.36
VPS13B-204ENST00000441350 ZNF862O60290 1169 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 DKC1O60832 514 aaKnown RBP eCLIP23.55■■□□□ 1.36
VPS13B-204ENST00000441350 EYA4O95677 639 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 PRKAR2AP13861 404 aaKnown RBP23.55■■□□□ 1.36
VPS13B-204ENST00000441350 SV2BQ7L1I2 683 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 SLAIN1Q8ND83 568 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 OR6J1Q8NGC5 347 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 AFAP1L1Q8TED9 768 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 PIGOQ8TEQ8 1089 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 AFG1LQ8WV93 481 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 ZNF302Q9NR11 478 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 BACH1O14867 736 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 ZBTB39O15060 712 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 LETM1O95202 739 aaPredicted RBP23.55■■□□□ 1.36
VPS13B-204ENST00000441350 STBD1O95210 358 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 PRR29P0C7W0 189 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 PLA2G4BP0C869 781 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 XRCC6P12956 609 aaKnown RBP eCLIP23.55■■□□□ 1.36
VPS13B-204ENST00000441350 HOXD8P13378 290 aaPredicted RBP23.55■■□□□ 1.36
VPS13B-204ENST00000441350 PNOCQ13519 176 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 PTCH2Q9Y6C5 1203 aa23.55■■□□□ 1.36
VPS13B-204ENST00000441350 HTTP42858 3142 aa23.54■■□□□ 1.36
VPS13B-204ENST00000441350 LOXHD1Q8IVV2 1947 aa23.54■■□□□ 1.36
VPS13B-204ENST00000441350 SEPT4O43236 478 aa23.54■■□□□ 1.36
VPS13B-204ENST00000441350 SLC12A3P55017 1021 aa23.54■■□□□ 1.36
VPS13B-204ENST00000441350 CKAP2LQ8IYA6 745 aa23.54■■□□□ 1.36
VPS13B-204ENST00000441350 SYT2Q8N9I0 419 aaPredicted RBP23.54■■□□□ 1.36
VPS13B-204ENST00000441350 LENG1Q96BZ8 264 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms