RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ARHGEF35A5YM69 484 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 KIAA0391O15091 583 aaKnown RBP5.78□□□□□ -1.48
LRIT3-201ENST00000327908 KINO60870 393 aaKnown RBP5.78□□□□□ -1.48
LRIT3-201ENST00000327908 EYA4O95677 639 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 ACTR2P61160 394 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 ARHGAP1Q07960 439 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 ZNF174Q15697 407 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 RRAGBQ5VZM2 374 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 RASGRP2Q7LDG7 609 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 NECAB2Q7Z6G3 386 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 RPAINQ86UA6 219 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 KLHDC9Q8NEP7 349 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 CAGE1Q8TC20 777 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 OXER1Q8TDS5 423 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 SNX29Q8TEQ0 813 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 LEO1Q8WVC0 666 aaPredicted RBP5.78□□□□□ -1.48
LRIT3-201ENST00000327908 KCNN1Q92952 543 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 NIFKQ9BYG3 293 aaKnown RBP5.78□□□□□ -1.48
LRIT3-201ENST00000327908 TBC1D7Q9P0N9 293 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 GABRQQ9UN88 632 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 SAMM50Q9Y512 469 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 NRCAMQ92823 1304 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 DGAT1O75907 488 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 MMP3P08254 477 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 GJA8P48165 433 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 PSEN2P49810 448 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 STAT5BP51692 787 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 FOSBP53539 338 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 NCBP1Q09161 790 aaKnown RBP5.78□□□□□ -1.48
LRIT3-201ENST00000327908 PSMD2Q13200 908 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 NCAPH2Q6IBW4 605 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 PDXDC2PQ6P474 469 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 FBXO16Q8IX29 292 aaPredicted RBP5.78□□□□□ -1.48
LRIT3-201ENST00000327908 CCDC51Q96ER9 411 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 IFT74Q96LB3 600 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 TOX2Q96NM4 488 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 TSPAN18Q96SJ8 248 aa5.78□□□□□ -1.48
LRIT3-201ENST00000327908 SGPL1O95470 568 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 F2P00734 622 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 OATP04181 439 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 PFKMP08237 780 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 ITGB5P18084 799 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 STIM1Q13586 685 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 PTPAQ15257 358 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 IER5Q5VY09 327 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 B3GNT9Q6UX72 402 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 ABHD15Q6UXT9 468 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 SV2BQ7L1I2 683 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 CCDC65Q8IXS2 484 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 HACE1Q8IYU2 909 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 GLG1Q92896 1179 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 GPR20Q99678 358 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 MTIF3Q9H2K0 278 aaKnown RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 VAV3Q9UKW4 847 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 KIF28PB7ZC32 967 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 TDP2O95551 362 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 TFRCP02786 760 aaKnown RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 SKIP12755 728 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 STAT6P42226 847 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 TXKP42681 527 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 MXD4Q14582 209 aaPredicted RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 TMEM119Q4V9L6 283 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 RESP18Q5W5W9 173 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 ZNF410Q86VK4 478 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 CKAP2LQ8IYA6 745 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 TRIML1Q8N9V2 468 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 GOLGA5Q8TBA6 731 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 RASGRP4Q8TDF6 673 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 LENG9Q96B70 501 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 USP28Q96RU2 1077 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 RNF208Q9H0X6 261 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 ATP6V0A4Q9HBG4 840 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 FOXD4L1Q9NU39 408 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 EXOC7Q9UPT5 735 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 MAFBQ9Y5Q3 323 aaPredicted RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 DCDC2CA8MYV0 355 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 FAM86B1E9PN63 330 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 DYNC1LI2O43237 492 aaPredicted RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 TBCAO75347 108 aaKnown RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 MYL3P08590 195 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 FAM86B2P0C5J1 330 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 EFNA5P52803 228 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 POU5F1Q01860 360 aaKnown RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 FAM160A1Q05DH4 1040 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 RBL2Q08999 1139 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 MFSD10Q14728 455 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 FOXR2Q6PJQ5 311 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 POTEEQ6S8J3 1075 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 C4orf32Q8N8J7 132 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 SLC7A3Q8WY07 619 aa5.77□□□□□ -1.49
LRIT3-201ENST00000327908 EIF2AK1Q9BQI3 630 aaKnown RBP5.77□□□□□ -1.49
LRIT3-201ENST00000327908 MYH7BA7E2Y1 1941 aa5.76□□□□□ -1.49
LRIT3-201ENST00000327908 PVALEFA0A1B0GWK0 134 aa5.76□□□□□ -1.49
LRIT3-201ENST00000327908 C17orf102A2RUQ5 167 aa5.76□□□□□ -1.49
LRIT3-201ENST00000327908 FGFR1OPO95684 399 aaKnown RBP5.76□□□□□ -1.49
LRIT3-201ENST00000327908 LGALS2P05162 132 aa5.76□□□□□ -1.49
LRIT3-201ENST00000327908 SMPD1P17405 629 aa5.76□□□□□ -1.49
LRIT3-201ENST00000327908 ATP2B1P20020 1258 aa5.76□□□□□ -1.49
LRIT3-201ENST00000327908 PAX3P23760 479 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms