RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	AAC3	P18238	307 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	YCL049C	P25577	312 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	MRPL17	P36528	281 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	ERP5	P38819	212 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	PAC1	P39946	494 aa	Known RBP	7.56	□□□□□ -1.2
TGA1	tA(UGC)A	SNO3	P43544	222 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	ALB1	P47019	175 aa	Predicted RBP	7.56	□□□□□ -1.2
TGA1	tA(UGC)A	YOR365C	Q08844	703 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	YPL272C	Q08984	517 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	SNF8	Q12483	233 aa		7.56	□□□□□ -1.2
TGA1	tA(UGC)A	PAR32	Q12515	295 aa	Known RBP	7.56	□□□□□ -1.2
TGA1	tA(UGC)A	HAA1	Q12753	694 aa	Known RBP	7.56	□□□□□ -1.2
TGA1	tA(UGC)A	ATP6	P00854	259 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	RPB5	P20434	215 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	KAE1	P36132	386 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	MOH1	P38191	138 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	TSC10	P38342	320 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	CIN4	P39110	191 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	MRX1	P40050	688 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	UBC9	P50623	157 aa	Predicted RBP	7.55	□□□□□ -1.2
TGA1	tA(UGC)A	DIA3	P52290	468 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	VPS73	P53142	486 aa	Known RBP	7.55	□□□□□ -1.2
TGA1	tA(UGC)A	TPC1	P53257	314 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	ARC35	P53731	342 aa	Known RBP	7.55	□□□□□ -1.2
TGA1	tA(UGC)A	YDR209C	Q03480	137 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	YPR091C	Q06833	770 aa		7.55	□□□□□ -1.2
TGA1	tA(UGC)A	ATP4	P05626	244 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	RPL7A	P05737	244 aa	Known RBP	7.54	□□□□□ -1.2
TGA1	tA(UGC)A	RPL43A	P0CX25	92 aa	Known RBP	7.54	□□□□□ -1.2
TGA1	tA(UGC)A	RPL43B	P0CX26	92 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	MCK1	P21965	375 aa	Known RBP	7.54	□□□□□ -1.2
TGA1	tA(UGC)A	ROT2	P38138	954 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	SEA4	P38164	1038 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	FES1	P38260	290 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	FAA2	P39518	744 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	QDR2	P40474	542 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	IAH1	P41734	238 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	CCT7	P42943	550 aa	Known RBP	7.54	□□□□□ -1.2
TGA1	tA(UGC)A	ROM1	P53046	1155 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	ATG21	Q02887	496 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	NUP53	Q03790	475 aa		7.54	□□□□□ -1.2
TGA1	tA(UGC)A	RPL7B	Q12213	244 aa	Known RBP	7.54	□□□□□ -1.2
TGA1	tA(UGC)A	YSF3	P0C074	85 aa	Predicted RBP	7.53	□□□□□ -1.2
TGA1	tA(UGC)A	RPL20A	P0CX23	172 aa	Known RBP	7.53	□□□□□ -1.2
TGA1	tA(UGC)A	RPL20B	P0CX24	172 aa	Predicted RBP	7.53	□□□□□ -1.2
TGA1	tA(UGC)A	CCA1	P21269	546 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	GPI12	P23797	304 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	RVS161	P25343	265 aa	Known RBP	7.53	□□□□□ -1.2
TGA1	tA(UGC)A	HEK2	P38199	381 aa	Known RBP RIP-Chip data	7.53	□□□□□ -1.2	not detected
TGA1	tA(UGC)A	IST2	P38250	946 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	YHR177W	P38867	453 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	IMA5	P40884	581 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	PHB1	P40961	287 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	MDV1	P47025	714 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	YJR115W	P47152	169 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	ATP22	P50273	684 aa	Predicted RBP	7.53	□□□□□ -1.2
TGA1	tA(UGC)A	MPA43	P53583	542 aa	Predicted RBP	7.53	□□□□□ -1.2
TGA1	tA(UGC)A	MMT1	Q03218	510 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	GMC2	Q06201	188 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	GGA1	Q06336	557 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	YPR172W	Q06608	200 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	DIA2	Q08496	732 aa	Predicted RBP	7.53	□□□□□ -1.2
TGA1	tA(UGC)A	YOR342C	Q12182	319 aa		7.53	□□□□□ -1.2
TGA1	tA(UGC)A	CYT1	P07143	309 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	EMP70	P32802	667 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	CUE2	P36075	443 aa	Known RBP	7.52	□□□□□ -1.21
TGA1	tA(UGC)A	OM14	P38325	134 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	RGI1	P40043	161 aa	Predicted RBP	7.52	□□□□□ -1.21
TGA1	tA(UGC)A	YJR141W	P47172	347 aa	Predicted RBP	7.52	□□□□□ -1.21
TGA1	tA(UGC)A	USE1	P53146	245 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	RNH70	P53331	553 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	HOL1	P53389	586 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	YMR010W	Q03687	405 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	YLR036C	Q07986	203 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	FDH1	Q08911	376 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	NSL1	Q12143	216 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	RPN6	Q12377	434 aa		7.52	□□□□□ -1.21
TGA1	tA(UGC)A	TY4B-P	A0A0B7P3V8	1104 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	BAR1	P12630	587 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	TOP3	P13099	656 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	MKK1	P32490	508 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	BET3	P36149	193 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	IFA38	P38286	347 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	RIC1	P40395	1056 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	LYS12	P40495	371 aa	Known RBP	7.51	□□□□□ -1.21
TGA1	tA(UGC)A	YIL067C	P40514	678 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	SEH1	P53011	349 aa	Known RBP	7.51	□□□□□ -1.21
TGA1	tA(UGC)A	ATG4	P53867	494 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	IGO1	P53897	168 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	UBP2	Q01476	1272 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	YPR109W	Q06104	294 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	PSR1	Q07800	427 aa		7.51	□□□□□ -1.21
TGA1	tA(UGC)A	PUS7	Q08647	676 aa	Known RBP	7.51	□□□□□ -1.21
TGA1	tA(UGC)A	AI1	P03875	834 aa		7.5	□□□□□ -1.21
TGA1	tA(UGC)A	ARG3	P05150	338 aa		7.5	□□□□□ -1.21
TGA1	tA(UGC)A	TPK2	P06245	380 aa		7.5	□□□□□ -1.21
TGA1	tA(UGC)A	PUT2	P07275	575 aa		7.5	□□□□□ -1.21
TGA1	tA(UGC)A	PBN1	P25580	416 aa		7.5	□□□□□ -1.21
TGA1	tA(UGC)A	CSM1	P25651	190 aa		7.5	□□□□□ -1.21
TGA1	tA(UGC)A	NUP2	P32499	720 aa		7.5	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 644 ms