RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 CUP2P15315 225 aa-1.58□□□□□ -2.66
snR53snR53 MSP1P28737 362 aa-1.58□□□□□ -2.66
snR53snR53 YBR071WP38243 211 aa-1.58□□□□□ -2.66
snR53snR53 FCY21P40039 528 aa-1.58□□□□□ -2.66
snR53snR53 SLZ1P40167 298 aa-1.58□□□□□ -2.66
snR53snR53 MAM33P40513 266 aa-1.58□□□□□ -2.66
snR53snR53 PET130P47065 347 aa-1.58□□□□□ -2.66
snR53snR53 DSK2P48510 373 aa-1.58□□□□□ -2.66
snR53snR53 PIL1P53252 339 aaKnown RBP-1.58□□□□□ -2.66
snR53snR53 STD1Q02794 444 aa-1.58□□□□□ -2.66
snR53snR53 YML131WQ03102 365 aa-1.58□□□□□ -2.66
snR53snR53 GTO3Q04806 366 aa-1.58□□□□□ -2.66
snR53snR53 DCR2Q05924 578 aa-1.58□□□□□ -2.66
snR53snR53 SMC5Q08204 1093 aa-1.58□□□□□ -2.66
snR53snR53 COR1P07256 457 aa-1.59□□□□□ -2.66
snR53snR53 CPT1P17898 393 aa-1.59□□□□□ -2.66
snR53snR53 TFB1P32776 642 aa-1.59□□□□□ -2.66
snR53snR53 UFE1P41834 346 aa-1.59□□□□□ -2.66
snR53snR53 SEH1P53011 349 aaKnown RBP-1.59□□□□□ -2.66
snR53snR53 YNL095CP53932 642 aa-1.59□□□□□ -2.66
snR53snR53 TDA1Q03533 586 aa-1.59□□□□□ -2.66
snR53snR53 YMR018WQ04364 514 aa-1.59□□□□□ -2.66
snR53snR53 MFB1Q04922 465 aa-1.59□□□□□ -2.66
snR53snR53 RIM20Q12033 661 aa-1.59□□□□□ -2.66
snR53snR53 YPR063CQ12160 140 aa-1.59□□□□□ -2.66
snR53snR53 SNU66Q12420 587 aaPredicted RBP-1.59□□□□□ -2.66
snR53snR53 PAP1P29468 568 aaKnown RBP-1.6□□□□□ -2.67
snR53snR53 SIN4P32259 974 aa-1.6□□□□□ -2.67
snR53snR53 CLB6P32943 380 aa-1.6□□□□□ -2.67
snR53snR53 MRPL36P36531 177 aa-1.6□□□□□ -2.67
snR53snR53 YMR262WP38430 313 aa-1.6□□□□□ -2.67
snR53snR53 LYS1P38998 373 aaRIP-Chip data-1.6□□□□□ -2.67not detected
snR53snR53 DCP1Q12517 231 aaPredicted RBP-1.6□□□□□ -2.67
snR53snR53 SSE2P32590 693 aaKnown RBP-1.61□□□□□ -2.67
snR53snR53 ALY1P36117 915 aa-1.61□□□□□ -2.67
snR53snR53 YHK8P38776 514 aa-1.61□□□□□ -2.67
snR53snR53 MBB1P39534 108 aa-1.61□□□□□ -2.67
snR53snR53 ERP2P39704 215 aa-1.61□□□□□ -2.67
snR53snR53 YGR250CP53316 781 aaKnown RBP-1.61□□□□□ -2.67
snR53snR53 UTP14Q04500 899 aaKnown RBP-1.61□□□□□ -2.67
snR53snR53 MSC3Q05812 728 aa-1.61□□□□□ -2.67
snR53snR53 FEX1Q08913 375 aa-1.61□□□□□ -2.67
snR53snR53 FEX2Q08991 375 aa-1.61□□□□□ -2.67
snR53snR53 RAV1P47104 1357 aa-1.61□□□□□ -2.67
snR53snR53 MF(ALPHA)1P01149 165 aa-1.62□□□□□ -2.67
snR53snR53 ADE4P04046 510 aaKnown RBP-1.62□□□□□ -2.67
snR53snR53 HSC82P15108 705 aaKnown RBP-1.62□□□□□ -2.67
snR53snR53 PRP2P20095 876 aaPredicted RBP-1.62□□□□□ -2.67
snR53snR53 PHA2P32452 334 aa-1.62□□□□□ -2.67
snR53snR53 SPS19P32573 292 aaKnown RBP-1.62□□□□□ -2.67
snR53snR53 RAD23P32628 398 aaKnown RBP-1.62□□□□□ -2.67
snR53snR53 YER010CP40011 234 aa-1.62□□□□□ -2.67
snR53snR53 PSF2P40359 213 aa-1.62□□□□□ -2.67
snR53snR53 ECM27P47144 725 aa-1.62□□□□□ -2.67
snR53snR53 LYS4P49367 693 aaPredicted RBP-1.62□□□□□ -2.67
snR53snR53 SMD1Q02260 146 aaPredicted RBP-1.62□□□□□ -2.67
snR53snR53 BET5Q03630 159 aa-1.62□□□□□ -2.67
snR53snR53 YDR387CQ04162 555 aa-1.62□□□□□ -2.67
snR53snR53 LDB17Q12342 491 aa-1.62□□□□□ -2.67
snR53snR53 SGS1P35187 1447 aa-1.63□□□□□ -2.67
snR53snR53 YLR302CO13544 120 aa-1.63□□□□□ -2.67
snR53snR53 YOL162WP0CF19 215 aa-1.63□□□□□ -2.67
snR53snR53 CTA1P15202 515 aa-1.63□□□□□ -2.67
snR53snR53 DPH5P32469 300 aaPredicted RBP-1.63□□□□□ -2.67
snR53snR53 TOA1P32773 286 aa-1.63□□□□□ -2.67
snR53snR53 GRX7P38068 203 aa-1.63□□□□□ -2.67
snR53snR53 ENP1P38333 483 aaKnown RBP-1.63□□□□□ -2.67
snR53snR53 SFH5P47008 294 aa-1.63□□□□□ -2.67
snR53snR53 YNL040WP53960 456 aaPredicted RBP-1.63□□□□□ -2.67
snR53snR53 IOC4Q04213 475 aa-1.63□□□□□ -2.67
snR53snR53 YOR376WQ08900 122 aa-1.63□□□□□ -2.67
snR53snR53 PRP46Q12417 451 aaPredicted RBP-1.63□□□□□ -2.67
snR53snR53 ARD1P07347 238 aaPredicted RBP-1.64□□□□□ -2.67
snR53snR53 GIT1P25346 518 aa-1.64□□□□□ -2.67
snR53snR53 PEP3P27801 918 aa-1.64□□□□□ -2.67
snR53snR53 RRP14P36080 434 aaKnown RBP-1.64□□□□□ -2.67
snR53snR53 DSL1P53847 754 aa-1.64□□□□□ -2.67
snR53snR53 ALF1P53904 254 aa-1.64□□□□□ -2.67
snR53snR53 YLR177WQ06251 628 aa-1.64□□□□□ -2.67
snR53snR53 LUC7Q07508 261 aaPredicted RBP-1.64□□□□□ -2.67
snR53snR53 SGT1Q08446 395 aa-1.64□□□□□ -2.67
snR53snR53 ORT1Q12375 292 aa-1.64□□□□□ -2.67
snR53snR53 YGR161W-CQ3E744 92 aa-1.64□□□□□ -2.67
snR53snR53 PRD1P25375 712 aa-1.65□□□□□ -2.67
snR53snR53 MYO3P36006 1272 aa-1.65□□□□□ -2.67
snR53snR53 GEP4P38812 185 aa-1.65□□□□□ -2.67
snR53snR53 SYF2P53277 215 aaPredicted RBP-1.65□□□□□ -2.67
snR53snR53 NCS2P53923 493 aaPredicted RBP-1.65□□□□□ -2.67
snR53snR53 COG6P53959 839 aa-1.65□□□□□ -2.67
snR53snR53 YDR222WQ04925 415 aa-1.65□□□□□ -2.67
snR53snR53 ARR1Q06596 294 aa-1.65□□□□□ -2.67
snR53snR53 MDM36Q06820 579 aa-1.65□□□□□ -2.67
snR53snR53 RDS3Q06835 107 aaPredicted RBP-1.65□□□□□ -2.67
snR53snR53 TY3A-GQ12173 290 aa-1.65□□□□□ -2.67
snR53snR53 TY3A-IQ99219 290 aa-1.65□□□□□ -2.67
snR53snR53 SCO1P23833 295 aa-1.66□□□□□ -2.68
snR53snR53 MSR1P38714 643 aa-1.66□□□□□ -2.68
snR53snR53 YMR147WP40218 223 aaKnown RBP-1.66□□□□□ -2.68
snR53snR53 ASG7P46993 209 aa-1.66□□□□□ -2.68
snR53snR53 YMR166CQ03829 368 aa-1.66□□□□□ -2.68
Retrieved 100 of 5,963 RNA–protein pairs in 152.9 ms