RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	RFU1	Q08003	200 aa		4.28	□□□□□ -1.72
YPL260W	YPL260W	LEA1	Q08963	238 aa	Predicted RBP	4.28	□□□□□ -1.72
YPL260W	YPL260W	YLR108C	Q12259	485 aa		4.28	□□□□□ -1.72
YPL260W	YPL260W	HSH49	Q99181	213 aa	Predicted RBP	4.28	□□□□□ -1.72
YPL260W	YPL260W	FKS1	P38631	1876 aa	Known RBP	4.28	□□□□□ -1.73
YPL260W	YPL260W	RPL31A	P0C2H8	113 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	RPL31B	P0C2H9	113 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	RPS18A	P0CX55	146 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	RPS18B	P0CX56	146 aa	Predicted RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	TCP1	P12612	559 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	CAF20	P12962	161 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	URA6	P15700	204 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	MET8	P15807	274 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	RNR1	P21524	888 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	RPL24B	P24000	155 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	DBR1	P24309	405 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	MNE1	P24720	663 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	MRPL9	P31334	269 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	BIO2	P32451	375 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	ATP11	P32453	318 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	BEM3	P32873	1128 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	ZRT3	P34240	503 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
YPL260W	YPL260W	KSP1	P38691	1029 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	ARN1	P38731	627 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	DHH1	P39517	506 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	MIT1	P40002	666 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	CHS6	P40955	746 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	FIG4	P42837	879 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	SNN1	P48232	102 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	CTR1	P49573	406 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	BIO3	P50277	480 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	YGL204C	P53089	101 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	YGL039W	P53183	348 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	SLX9	P53251	210 aa	Predicted RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
YPL260W	YPL260W	BRE5	P53741	515 aa	Known RBP	4.27	□□□□□ -1.73
YPL260W	YPL260W	HXT15	P54854	567 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	TPP1	Q03796	238 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	YPR127W	Q06494	345 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	HDA2	Q06629	674 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	ENV7	Q12003	364 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	HOS1	Q12214	470 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	LCB4	Q12246	624 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	PNS1	Q12412	539 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	PCC1	Q3E833	88 aa		4.27	□□□□□ -1.73
YPL260W	YPL260W	ATP1	P07251	545 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	CIT2	P08679	460 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	IFM1	P25038	676 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	DAL2	P25335	343 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	DCC1	P25559	380 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	MET22	P32179	357 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	LAG1	P38703	411 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	CYC2	P38909	366 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	UBP5	P39944	805 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YEL025C	P39991	1188 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	UTP7	P40055	554 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	RPL10	P41805	221 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	AAD10	P47182	288 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	PUS4	P48567	403 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	YGL138C	P53122	345 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	SAM50	P53969	484 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YAT1	P80235	687 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	SKY1	Q03656	742 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	HOF1	Q05080	669 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YET3	Q07451	203 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	PML1	Q07930	204 aa	Predicted RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	OXR1	Q08952	273 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	RTK1	Q12100	620 aa	Predicted RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	SFM1	Q12314	213 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	RTN2	Q12443	393 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	AGC1	Q12482	902 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YPL119C-A	Q3E751	87 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YOL159C-A	Q3E769	90 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	MOT1	P32333	1867 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	FKS3	Q04952	1785 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	STE2	D6VTK4	431 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	TRP4	P07285	380 aa	Predicted RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	YPK1	P12688	680 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	MET16	P18408	261 aa	Predicted RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	IDP1	P21954	428 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	PRE9	P23638	258 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	MIR1	P23641	311 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	RSA4	P25382	515 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	MGT1	P26188	188 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	LAC1	P28496	418 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	UGA4	P32837	571 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YKL162C	P36052	402 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	APT2	P36973	181 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	HMT1	P38074	348 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	PRS3	P38689	320 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	VPS45	P38932	577 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	FLC2	P39719	783 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	RBG1	P39729	369 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YIL166C	P40445	542 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	GLR1	P41921	483 aa	Known RBP	4.26	□□□□□ -1.73
YPL260W	YPL260W	GSM1	P42950	618 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	MRX5	P47007	382 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YGR012W	P53206	393 aa		4.26	□□□□□ -1.73
YPL260W	YPL260W	YGR017W	P53210	297 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms