RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C LEU4P06208 619 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C ADH7P25377 361 aa3.34□□□□□ -1.87
VPS53YJL029C CHA1P25379 360 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C SYP1P25623 870 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C ATO2P32907 282 aa3.34□□□□□ -1.87
VPS53YJL029C AHP1P38013 176 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C YBR139WP38109 508 aa3.34□□□□□ -1.87
VPS53YJL029C YBR184WP38299 523 aa3.34□□□□□ -1.87
VPS53YJL029C SEC31P38968 1273 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C YIL165CP40446 119 aa3.34□□□□□ -1.87
VPS53YJL029C SEC26P41810 973 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C YPT32P51996 222 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C CUS2P53830 285 aaPredicted RBP3.34□□□□□ -1.87
VPS53YJL029C YNL010WP53981 241 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C NOG1Q02892 647 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C RNY1Q02933 434 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C YMR265CQ03508 461 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C SWF1Q04629 336 aa3.34□□□□□ -1.87
VPS53YJL029C YOR365CQ08844 703 aa3.34□□□□□ -1.87
VPS53YJL029C RPL7BQ12213 244 aaKnown RBP3.34□□□□□ -1.87
VPS53YJL029C NTO1Q12311 748 aa3.34□□□□□ -1.87
VPS53YJL029C YOS9Q99220 542 aa3.34□□□□□ -1.87
VPS53YJL029C CAR1P00812 333 aaKnown RBP3.34□□□□□ -1.88
VPS53YJL029C VPS33P20795 691 aa3.34□□□□□ -1.88
VPS53YJL029C SEF1P34228 1148 aa3.34□□□□□ -1.88
VPS53YJL029C CBP4P37267 147 aa3.34□□□□□ -1.88
VPS53YJL029C HSM3P38348 480 aa3.34□□□□□ -1.88
VPS53YJL029C IAH1P41734 238 aa3.34□□□□□ -1.88
VPS53YJL029C TDA10P42938 290 aa3.34□□□□□ -1.88
VPS53YJL029C MDV1P47025 714 aa3.34□□□□□ -1.88
VPS53YJL029C APS3P47064 194 aa3.34□□□□□ -1.88
VPS53YJL029C AAD10P47182 288 aa3.34□□□□□ -1.88
VPS53YJL029C BIO3P50277 480 aa3.34□□□□□ -1.88
VPS53YJL029C YNR040WP53736 256 aa3.34□□□□□ -1.88
VPS53YJL029C NAN1Q02931 896 aaKnown RBP3.34□□□□□ -1.88
VPS53YJL029C SMA2Q04658 369 aa3.34□□□□□ -1.88
VPS53YJL029C GGA1Q06336 557 aa3.34□□□□□ -1.88
VPS53YJL029C HDA2Q06629 674 aa3.34□□□□□ -1.88
VPS53YJL029C REH1Q06709 432 aa3.34□□□□□ -1.88
VPS53YJL029C MLH3Q12083 715 aa3.34□□□□□ -1.88
VPS53YJL029C HUA2Q12134 243 aa3.34□□□□□ -1.88
VPS53YJL029C TPO4Q12256 659 aa3.34□□□□□ -1.88
VPS53YJL029C YPR064WQ12492 139 aa3.34□□□□□ -1.88
VPS53YJL029C MSS116P15424 664 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C ART10P18634 518 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C EXO70P19658 623 aa3.33□□□□□ -1.88
VPS53YJL029C APN1P22936 367 aa3.33□□□□□ -1.88
VPS53YJL029C CPR3P25719 182 aa3.33□□□□□ -1.88
VPS53YJL029C CAT2P32796 670 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C MSN2P33748 704 aa3.33□□□□□ -1.88
VPS53YJL029C SCO2P38072 301 aa3.33□□□□□ -1.88
VPS53YJL029C DSS1P39112 969 aa3.33□□□□□ -1.88
VPS53YJL029C RLP7P40693 322 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C RPL10P41805 221 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C ALB1P47019 175 aaPredicted RBP3.33□□□□□ -1.88
VPS53YJL029C SPT20P50875 604 aa3.33□□□□□ -1.88
VPS53YJL029C MAL11P53048 616 aa3.33□□□□□ -1.88
VPS53YJL029C MRM2P53123 320 aa3.33□□□□□ -1.88
VPS53YJL029C SHE9Q04172 456 aa3.33□□□□□ -1.88
VPS53YJL029C RQC1Q05468 723 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C YPR091CQ06833 770 aa3.33□□□□□ -1.88
VPS53YJL029C FMP45Q07651 309 aa3.33□□□□□ -1.88
VPS53YJL029C ESA1Q08649 445 aa3.33□□□□□ -1.88
VPS53YJL029C MCH5Q08777 521 aa3.33□□□□□ -1.88
VPS53YJL029C YOR223WQ12015 292 aa3.33□□□□□ -1.88
VPS53YJL029C PNS1Q12412 539 aa3.33□□□□□ -1.88
VPS53YJL029C TY4A-HQ6Q5P6 413 aa3.33□□□□□ -1.88
VPS53YJL029C FAS1P07149 2051 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C RPB5P20434 215 aa3.33□□□□□ -1.88
VPS53YJL029C RVS161P25343 265 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C STP22P25604 385 aa3.33□□□□□ -1.88
VPS53YJL029C LTV1P34078 463 aa3.33□□□□□ -1.88
VPS53YJL029C SNU114P36048 1008 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C GLG1P36143 616 aa3.33□□□□□ -1.88
VPS53YJL029C YKR078WP36158 585 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C MOH1P38191 138 aa3.33□□□□□ -1.88
VPS53YJL029C TRR2P38816 342 aa3.33□□□□□ -1.88
VPS53YJL029C YJL068CP40363 299 aa3.33□□□□□ -1.88
VPS53YJL029C AZF1P41696 914 aa3.33□□□□□ -1.88
VPS53YJL029C HOS2P53096 452 aaPredicted RBP3.33□□□□□ -1.88
VPS53YJL029C VPS73P53142 486 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C LGE1Q02796 332 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C EFR3Q03653 782 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C YMR310CQ04867 317 aaPredicted RBP3.33□□□□□ -1.88
VPS53YJL029C YPR174CQ06616 221 aaPredicted RBP3.33□□□□□ -1.88
VPS53YJL029C THI72Q08579 599 aa3.33□□□□□ -1.88
VPS53YJL029C YIG1Q08956 461 aa3.33□□□□□ -1.88
VPS53YJL029C YPL272CQ08984 517 aa3.33□□□□□ -1.88
VPS53YJL029C RPN5Q12250 445 aaKnown RBP3.33□□□□□ -1.88
VPS53YJL029C TRP3P00937 484 aa3.32□□□□□ -1.88
VPS53YJL029C ARE1P25628 610 aa3.32□□□□□ -1.88
VPS53YJL029C STE14P32584 239 aa3.32□□□□□ -1.88
VPS53YJL029C YSC84P32793 468 aa3.32□□□□□ -1.88
VPS53YJL029C SSO1P32867 290 aa3.32□□□□□ -1.88
VPS53YJL029C BET3P36149 193 aa3.32□□□□□ -1.88
VPS53YJL029C ATG7P38862 630 aa3.32□□□□□ -1.88
VPS53YJL029C AIM46P38885 310 aa3.32□□□□□ -1.88
VPS53YJL029C YDR089WP38966 869 aa3.32□□□□□ -1.88
VPS53YJL029C GIP2P40036 548 aa3.32□□□□□ -1.88
VPS53YJL029C MGS1P40151 587 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 140.1 ms