RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W CLB3P24870 427 aa2.36□□□□□ -2.03
CIC1YHR052W COS5P47187 383 aa2.36□□□□□ -2.03
CIC1YHR052W MRPL19P53875 158 aa2.36□□□□□ -2.03
CIC1YHR052W COS7Q07788 383 aa2.36□□□□□ -2.03
CIC1YHR052W SMF3Q12078 473 aaPredicted RBP2.36□□□□□ -2.03
CIC1YHR052W PGA3Q12746 312 aaKnown RBP2.36□□□□□ -2.03
CIC1YHR052W MSI1P13712 422 aa2.35□□□□□ -2.03
CIC1YHR052W ERG3P32353 365 aa2.35□□□□□ -2.03
CIC1YHR052W CHK1P38147 527 aa2.35□□□□□ -2.03
CIC1YHR052W NTC20P38302 140 aaPredicted RBP2.35□□□□□ -2.03
CIC1YHR052W COX14P39103 70 aa2.35□□□□□ -2.03
CIC1YHR052W SEO1P39709 593 aa2.35□□□□□ -2.03
CIC1YHR052W YER186CP40101 306 aa2.35□□□□□ -2.03
CIC1YHR052W VHS1Q03785 461 aa2.35□□□□□ -2.03
CIC1YHR052W TAF11Q04226 346 aa2.35□□□□□ -2.03
CIC1YHR052W LIP2Q06005 328 aa2.35□□□□□ -2.03
CIC1YHR052W TPT1Q12272 230 aaKnown RBP2.35□□□□□ -2.03
CIC1YHR052W RED1P14291 827 aa2.34□□□□□ -2.03
CIC1YHR052W RPB5P20434 215 aa2.34□□□□□ -2.03
CIC1YHR052W YCL068CP25593 260 aa2.34□□□□□ -2.03
CIC1YHR052W PHA2P32452 334 aa2.34□□□□□ -2.03
CIC1YHR052W YME2P32843 850 aa2.34□□□□□ -2.03
CIC1YHR052W RRP1P35178 278 aaPredicted RBP2.34□□□□□ -2.03
CIC1YHR052W BAT1P38891 393 aaKnown RBP2.34□□□□□ -2.03
CIC1YHR052W BIR1P47134 954 aa2.34□□□□□ -2.03
CIC1YHR052W YGL138CP53122 345 aa2.34□□□□□ -2.03
CIC1YHR052W ARX1Q03862 593 aaKnown RBP2.34□□□□□ -2.03
CIC1YHR052W MDM36Q06820 579 aa2.34□□□□□ -2.03
CIC1YHR052W CMS1Q07897 291 aaKnown RBP2.34□□□□□ -2.03
CIC1YHR052W DNL4Q08387 944 aaPredicted RBP2.34□□□□□ -2.03
CIC1YHR052W YGK3Q12222 375 aaPredicted RBP2.34□□□□□ -2.03
CIC1YHR052W ATG34Q12292 412 aa2.34□□□□□ -2.03
CIC1YHR052W PSK1P31374 1356 aa2.34□□□□□ -2.04
CIC1YHR052W PRR1P28708 518 aa2.33□□□□□ -2.04
CIC1YHR052W YBR056WP38081 501 aa2.33□□□□□ -2.04
CIC1YHR052W MRPS9P38120 278 aa2.33□□□□□ -2.04
CIC1YHR052W RRN10P38204 145 aa2.33□□□□□ -2.04
CIC1YHR052W RRP4P38792 359 aaKnown RBP2.33□□□□□ -2.04
CIC1YHR052W OXA1P39952 402 aa2.33□□□□□ -2.04
CIC1YHR052W YFR057WP43625 151 aa2.33□□□□□ -2.04
CIC1YHR052W MRM2P53123 320 aa2.33□□□□□ -2.04
CIC1YHR052W SKO1Q02100 647 aa2.33□□□□□ -2.04
CIC1YHR052W URH1Q04179 340 aa2.33□□□□□ -2.04
CIC1YHR052W RTN1Q04947 295 aaKnown RBP2.33□□□□□ -2.04
CIC1YHR052W YPQ1Q12010 308 aa2.33□□□□□ -2.04
CIC1YHR052W COX4P04037 155 aa2.32□□□□□ -2.04
CIC1YHR052W IMA3P0CW40 589 aa2.32□□□□□ -2.04
CIC1YHR052W IMA4P0CW41 589 aa2.32□□□□□ -2.04
CIC1YHR052W NIP1P32497 812 aaKnown RBP2.32□□□□□ -2.04
CIC1YHR052W IES6P32617 166 aa2.32□□□□□ -2.04
CIC1YHR052W PTI1P39927 425 aaPredicted RBP2.32□□□□□ -2.04
CIC1YHR052W NDE1P40215 560 aa2.32□□□□□ -2.04
CIC1YHR052W SIM1P40472 476 aa2.32□□□□□ -2.04
CIC1YHR052W EGT2P42835 1041 aa2.32□□□□□ -2.04
CIC1YHR052W ATG18P43601 500 aa2.32□□□□□ -2.04
CIC1YHR052W BNS1P50084 137 aa2.32□□□□□ -2.04
CIC1YHR052W MST27P53176 234 aa2.32□□□□□ -2.04
CIC1YHR052W MRPS16Q02608 121 aa2.32□□□□□ -2.04
CIC1YHR052W ECM11Q04110 302 aa2.32□□□□□ -2.04
CIC1YHR052W COG4Q06096 861 aa2.32□□□□□ -2.04
CIC1YHR052W DIS3Q08162 1001 aaKnown RBP2.32□□□□□ -2.04
CIC1YHR052W IMA2Q08295 589 aa2.32□□□□□ -2.04
CIC1YHR052W IES4Q08561 116 aa2.32□□□□□ -2.04
CIC1YHR052W ISN1Q99312 450 aa2.32□□□□□ -2.04
CIC1YHR052W SRV2P17555 526 aaKnown RBP2.31□□□□□ -2.04
CIC1YHR052W OM14P38325 134 aa2.31□□□□□ -2.04
CIC1YHR052W LCB3P47013 409 aa2.31□□□□□ -2.04
CIC1YHR052W KAP120Q02932 1032 aa2.31□□□□□ -2.04
CIC1YHR052W CCE1Q03702 353 aa2.31□□□□□ -2.04
CIC1YHR052W YET2Q04210 160 aa2.31□□□□□ -2.04
CIC1YHR052W SNT309Q06091 175 aaPredicted RBP2.31□□□□□ -2.04
CIC1YHR052W RRP9Q06506 573 aaKnown RBP2.31□□□□□ -2.04
CIC1YHR052W YRF1-4O13559 1382 aa2.31□□□□□ -2.04
CIC1YHR052W PRB1P09232 635 aa2.3□□□□□ -2.04
CIC1YHR052W DPH5P32469 300 aaPredicted RBP2.3□□□□□ -2.04
CIC1YHR052W MMS4P38257 691 aa2.3□□□□□ -2.04
CIC1YHR052W ALD5P40047 520 aaKnown RBP2.3□□□□□ -2.04
CIC1YHR052W PGU1P47180 361 aa2.3□□□□□ -2.04
CIC1YHR052W CRH1P53301 507 aa2.3□□□□□ -2.04
CIC1YHR052W TY1B-AO13527 1196 aaKnown RBP2.29□□□□□ -2.04
CIC1YHR052W ADE4P04046 510 aaKnown RBP2.29□□□□□ -2.04
CIC1YHR052W URA4P20051 364 aa2.29□□□□□ -2.04
CIC1YHR052W CDC50P25656 391 aa2.29□□□□□ -2.04
CIC1YHR052W YKL097CP34245 136 aa2.29□□□□□ -2.04
CIC1YHR052W ANR2P36090 516 aaPredicted RBP2.29□□□□□ -2.04
CIC1YHR052W YHK8P38776 514 aa2.29□□□□□ -2.04
CIC1YHR052W TIM17P39515 158 aa2.29□□□□□ -2.04
CIC1YHR052W GPD2P41911 440 aaKnown RBP2.29□□□□□ -2.04
CIC1YHR052W MKC7P53379 596 aa2.29□□□□□ -2.04
CIC1YHR052W OCA2P53949 197 aa2.29□□□□□ -2.04
CIC1YHR052W DON1Q05610 365 aa2.29□□□□□ -2.04
CIC1YHR052W TSR2Q06672 205 aaKnown RBP2.29□□□□□ -2.04
CIC1YHR052W MFG1Q07684 458 aa2.29□□□□□ -2.04
CIC1YHR052W BUG1Q12191 341 aa2.29□□□□□ -2.04
CIC1YHR052W HOM3P10869 527 aa2.28□□□□□ -2.04
CIC1YHR052W CAP2P13517 287 aa2.28□□□□□ -2.04
CIC1YHR052W EXG1P23776 448 aaKnown RBP2.28□□□□□ -2.04
CIC1YHR052W TFB1P32776 642 aa2.28□□□□□ -2.04
CIC1YHR052W NFU1P32860 256 aa2.28□□□□□ -2.04
CIC1YHR052W CHS6P40955 746 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms