RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W ART10P18634 518 aaKnown RBP2.88□□□□□ -1.95
PRE1YER012W EXO70P19658 623 aa2.88□□□□□ -1.95
PRE1YER012W YCK1P23291 538 aa2.88□□□□□ -1.95
PRE1YER012W TCM62P38228 572 aaKnown RBP2.88□□□□□ -1.95
PRE1YER012W VID24P38263 362 aa2.88□□□□□ -1.95
PRE1YER012W GCD10P41814 478 aa2.88□□□□□ -1.95
PRE1YER012W BTN2P53286 410 aa2.88□□□□□ -1.95
PRE1YER012W RTT102P53330 157 aa2.88□□□□□ -1.95
PRE1YER012W ARP5P53946 755 aa2.88□□□□□ -1.95
PRE1YER012W YLR152CP54072 576 aa2.88□□□□□ -1.95
PRE1YER012W FUS2Q05670 677 aa2.88□□□□□ -1.95
PRE1YER012W THP3Q12049 470 aaKnown RBP2.88□□□□□ -1.95
PRE1YER012W RBD2Q12270 262 aa2.88□□□□□ -1.95
PRE1YER012W RRD2Q12461 358 aa2.88□□□□□ -1.95
PRE1YER012W SEN1Q00416 2231 aaKnown RBP2.88□□□□□ -1.95
PRE1YER012W IRA1P18963 3092 aa2.87□□□□□ -1.95
PRE1YER012W HHF1P02309 103 aaKnown RBP2.87□□□□□ -1.95
PRE1YER012W RPL19AP0CX82 189 aaKnown RBP2.87□□□□□ -1.95
PRE1YER012W RPL19BP0CX83 189 aaPredicted RBP2.87□□□□□ -1.95
PRE1YER012W CPR4P25334 318 aa2.87□□□□□ -1.95
PRE1YER012W RSA4P25382 515 aaKnown RBP2.87□□□□□ -1.95
PRE1YER012W PRR1P28708 518 aa2.87□□□□□ -1.95
PRE1YER012W BUD2P33314 1104 aa2.87□□□□□ -1.95
PRE1YER012W HEL1P36113 551 aa2.87□□□□□ -1.95
PRE1YER012W YBR056WP38081 501 aa2.87□□□□□ -1.95
PRE1YER012W DUG2P38149 878 aa2.87□□□□□ -1.95
PRE1YER012W SIP3P38717 1229 aa2.87□□□□□ -1.95
PRE1YER012W SPO22P40511 975 aa2.87□□□□□ -1.95
PRE1YER012W LAM5P43560 674 aa2.87□□□□□ -1.95
PRE1YER012W AIM22P47051 409 aa2.87□□□□□ -1.95
PRE1YER012W DUO1P53168 247 aaKnown RBP2.87□□□□□ -1.95
PRE1YER012W GOR1P53839 350 aa2.87□□□□□ -1.95
PRE1YER012W TOF1P53840 1238 aa2.87□□□□□ -1.95
PRE1YER012W NCS2P53923 493 aaPredicted RBP2.87□□□□□ -1.95
PRE1YER012W TIM10P87108 93 aa2.87□□□□□ -1.95
PRE1YER012W VPS20Q04272 221 aa2.87□□□□□ -1.95
PRE1YER012W RBS1Q05672 457 aaKnown RBP2.87□□□□□ -1.95
PRE1YER012W SEM1O94742 89 aa2.86□□□□□ -1.95
PRE1YER012W ALG1P16661 449 aa2.86□□□□□ -1.95
PRE1YER012W GLK1P17709 500 aaKnown RBP2.86□□□□□ -1.95
PRE1YER012W LSB5P25369 354 aa2.86□□□□□ -1.95
PRE1YER012W SPR1P32603 445 aa2.86□□□□□ -1.95
PRE1YER012W FRE2P36033 711 aa2.86□□□□□ -1.95
PRE1YER012W ESL1P40456 1118 aa2.86□□□□□ -1.95
PRE1YER012W ART5P53244 586 aaKnown RBP2.86□□□□□ -1.95
PRE1YER012W YNL134CP53912 376 aaKnown RBP2.86□□□□□ -1.95
PRE1YER012W SLG1P54867 378 aa2.86□□□□□ -1.95
PRE1YER012W NGL3Q03210 505 aa2.86□□□□□ -1.95
PRE1YER012W MMR1Q06324 491 aa2.86□□□□□ -1.95
PRE1YER012W TSR1Q07381 788 aaKnown RBP2.86□□□□□ -1.95
PRE1YER012W SHS1Q07657 551 aa2.86□□□□□ -1.95
PRE1YER012W YOL075CQ08234 1294 aa2.86□□□□□ -1.95
PRE1YER012W ESA1Q08649 445 aa2.86□□□□□ -1.95
PRE1YER012W FMP40Q08968 688 aaPredicted RBP2.86□□□□□ -1.95
PRE1YER012W PLP2Q12017 286 aa2.86□□□□□ -1.95
PRE1YER012W YPL150WQ12152 901 aa2.86□□□□□ -1.95
PRE1YER012W INH1P01097 85 aa2.85□□□□□ -1.95
PRE1YER012W TCP1P12612 559 aaKnown RBP2.85□□□□□ -1.95
PRE1YER012W HSC82P15108 705 aaKnown RBP2.85□□□□□ -1.95
PRE1YER012W RDS1P25611 832 aa2.85□□□□□ -1.95
PRE1YER012W DPH2P32461 534 aa2.85□□□□□ -1.95
PRE1YER012W COT1P32798 439 aa2.85□□□□□ -1.95
PRE1YER012W NAT2P37293 288 aa2.85□□□□□ -1.95
PRE1YER012W MRX3P38172 270 aa2.85□□□□□ -1.95
PRE1YER012W LCB2P40970 561 aa2.85□□□□□ -1.95
PRE1YER012W RRT5P43607 289 aa2.85□□□□□ -1.95
PRE1YER012W NBP1P52919 319 aaPredicted RBP2.85□□□□□ -1.95
PRE1YER012W CAF40P53829 373 aa2.85□□□□□ -1.95
PRE1YER012W ALG11P53954 548 aaKnown RBP2.85□□□□□ -1.95
PRE1YER012W TOF2Q02208 771 aa2.85□□□□□ -1.95
PRE1YER012W CSM3Q04659 317 aa2.85□□□□□ -1.95
PRE1YER012W ECM7Q06200 448 aa2.85□□□□□ -1.95
PRE1YER012W YLH47Q06493 454 aa2.85□□□□□ -1.95
PRE1YER012W SMC5Q08204 1093 aa2.85□□□□□ -1.95
PRE1YER012W SMC6Q12749 1114 aa2.85□□□□□ -1.95
PRE1YER012W YBR126W-AQ8TGU7 68 aa2.85□□□□□ -1.95
PRE1YER012W RPS14AP06367 137 aaKnown RBP2.84□□□□□ -1.95
PRE1YER012W FRS2P15625 503 aaKnown RBP2.84□□□□□ -1.95
PRE1YER012W NDI1P32340 513 aa2.84□□□□□ -1.95
PRE1YER012W YSC83P32792 385 aa2.84□□□□□ -1.95
PRE1YER012W SAS3P34218 831 aa2.84□□□□□ -1.95
PRE1YER012W COY1P34237 679 aa2.84□□□□□ -1.95
PRE1YER012W MPE1P35728 441 aaKnown RBP2.84□□□□□ -1.95
PRE1YER012W HMT1P38074 348 aa2.84□□□□□ -1.95
PRE1YER012W OPY1P38271 328 aa2.84□□□□□ -1.95
PRE1YER012W CCT6P39079 546 aa2.84□□□□□ -1.95
PRE1YER012W RPS14BP39516 138 aaKnown RBP2.84□□□□□ -1.95
PRE1YER012W MOB1P40484 314 aa2.84□□□□□ -1.95
PRE1YER012W ASG7P46993 209 aa2.84□□□□□ -1.95
PRE1YER012W ARE2P53629 642 aaKnown RBP2.84□□□□□ -1.95
PRE1YER012W HER2Q03557 464 aa2.84□□□□□ -1.95
PRE1YER012W MFB1Q04922 465 aa2.84□□□□□ -1.95
PRE1YER012W HUA2Q12134 243 aa2.84□□□□□ -1.95
PRE1YER012W HIF1Q12373 385 aa2.84□□□□□ -1.95
PRE1YER012W NAT1P12945 854 aaKnown RBP2.83□□□□□ -1.96
PRE1YER012W OLE1P21147 510 aaKnown RBP2.83□□□□□ -1.96
PRE1YER012W BUB3P26449 341 aa2.83□□□□□ -1.96
PRE1YER012W PIM1P36775 1133 aa2.83□□□□□ -1.96
PRE1YER012W YBL029WP38201 376 aa2.83□□□□□ -1.96
PRE1YER012W YBR225WP38321 900 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms