RNA–Protein interactions for RNA: YDL224C

WHI4, Transcript of Putative RNA binding protein, yeast

Gene WHI4, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI4	YDL224C	CHS6	P40955	746 aa		4.95	□□□□□ -1.62
WHI4	YDL224C	YIP5	P53108	310 aa		4.95	□□□□□ -1.62
WHI4	YDL224C	BTN2	P53286	410 aa		4.95	□□□□□ -1.62
WHI4	YDL224C	CAF40	P53829	373 aa		4.95	□□□□□ -1.62
WHI4	YDL224C	NSE1	Q07913	336 aa		4.95	□□□□□ -1.62
WHI4	YDL224C	YDR061W	Q12298	539 aa		4.95	□□□□□ -1.62
WHI4	YDL224C	CDC21	P06785	304 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	QDR3	P38227	689 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	SIF2	P38262	535 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	RTT107	P38850	1070 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	LAM5	P43560	674 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	SSN8	P47821	323 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	YDL186W	P48568	277 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	YDR541C	Q03049	344 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	SRL2	Q12020	392 aa		4.94	□□□□□ -1.62
WHI4	YDL224C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
WHI4	YDL224C	YSC83	P32792	385 aa		4.93	□□□□□ -1.62
WHI4	YDL224C	BRO1	P48582	844 aa		4.93	□□□□□ -1.62
WHI4	YDL224C	WSC2	P53832	503 aa		4.93	□□□□□ -1.62
WHI4	YDL224C	YMR317W	Q04893	1140 aa		4.93	□□□□□ -1.62
WHI4	YDL224C	PHO84	P25297	587 aa	Known RBP	4.93	□□□□□ -1.62
WHI4	YDL224C	YJL213W	P40896	331 aa		4.93	□□□□□ -1.62
WHI4	YDL224C	CRZ1	P53968	678 aa		4.93	□□□□□ -1.62
WHI4	YDL224C	RAD61	Q99359	647 aa		4.93	□□□□□ -1.62
WHI4	YDL224C	GDH1	P07262	454 aa	Known RBP	4.92	□□□□□ -1.62
WHI4	YDL224C	DST1	P07273	309 aa		4.92	□□□□□ -1.62
WHI4	YDL224C	PRP16	P15938	1071 aa	Predicted RBP	4.92	□□□□□ -1.62
WHI4	YDL224C	MNL1	P38888	796 aa		4.92	□□□□□ -1.62
WHI4	YDL224C	STD1	Q02794	444 aa		4.92	□□□□□ -1.62
WHI4	YDL224C	MMT1	Q03218	510 aa		4.92	□□□□□ -1.62
WHI4	YDL224C	RRP9	Q06506	573 aa	Known RBP	4.92	□□□□□ -1.62
WHI4	YDL224C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.92	□□□□□ -1.62
WHI4	YDL224C	SLY1	P22213	666 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	MIX23	P38162	196 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	FAA2	P39518	744 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	GOR1	P53839	350 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	YFH1	Q07540	174 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	TIP41	Q12199	356 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	CPR1	P14832	162 aa	Known RBP	4.91	□□□□□ -1.62
WHI4	YDL224C	KRR1	P25586	316 aa	Predicted RBP	4.91	□□□□□ -1.62
WHI4	YDL224C	FAA1	P30624	700 aa	Known RBP	4.91	□□□□□ -1.62
WHI4	YDL224C	AGA1	P32323	725 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	YKL097C	P34245	136 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	NAT2	P37293	288 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	RIB5	P38145	238 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	GDT1	P38301	280 aa	Predicted RBP	4.91	□□□□□ -1.62
WHI4	YDL224C	OST1	P41543	476 aa	Known RBP	4.91	□□□□□ -1.62
WHI4	YDL224C	ASN2	P49090	572 aa	Known RBP	4.91	□□□□□ -1.62
WHI4	YDL224C	DBP9	Q06218	594 aa	Known RBP	4.91	□□□□□ -1.62
WHI4	YDL224C	RNH203	Q12338	110 aa		4.91	□□□□□ -1.62
WHI4	YDL224C	PRO3	P32263	286 aa	Known RBP	4.9	□□□□□ -1.63
WHI4	YDL224C	RGT1	P32862	1170 aa		4.9	□□□□□ -1.63
WHI4	YDL224C	YBR056W	P38081	501 aa		4.9	□□□□□ -1.63
WHI4	YDL224C	HXT11	P54862	567 aa		4.9	□□□□□ -1.63
WHI4	YDL224C	YMR181C	Q03231	154 aa		4.9	□□□□□ -1.63
WHI4	YDL224C	ECM7	Q06200	448 aa		4.9	□□□□□ -1.63
WHI4	YDL224C	IPK1	Q06667	281 aa		4.9	□□□□□ -1.63
WHI4	YDL224C	THP3	Q12049	470 aa	Known RBP	4.9	□□□□□ -1.63
WHI4	YDL224C	RRP12	Q12754	1228 aa	Known RBP	4.9	□□□□□ -1.63
WHI4	YDL224C	MRP4	P32902	394 aa		4.89	□□□□□ -1.63
WHI4	YDL224C	KKQ8	P36004	724 aa		4.89	□□□□□ -1.63
WHI4	YDL224C	PAC11	P40960	533 aa		4.89	□□□□□ -1.63
WHI4	YDL224C	SKN1	P33336	771 aa		4.89	□□□□□ -1.63
WHI4	YDL224C	RRP1	P35178	278 aa	Predicted RBP	4.89	□□□□□ -1.63
WHI4	YDL224C	SPP381	P38282	291 aa	Predicted RBP	4.89	□□□□□ -1.63
WHI4	YDL224C	NAS2	P40555	220 aa		4.89	□□□□□ -1.63
WHI4	YDL224C	MKT1	P40850	830 aa	Known RBP	4.89	□□□□□ -1.63
WHI4	YDL224C	AZR1	P50080	613 aa		4.89	□□□□□ -1.63
WHI4	YDL224C	MSO1	P53604	210 aa	Known RBP	4.89	□□□□□ -1.63
WHI4	YDL224C	PML1	Q07930	204 aa	Predicted RBP	4.89	□□□□□ -1.63
WHI4	YDL224C	PSY3	Q12318	242 aa		4.89	□□□□□ -1.63
WHI4	YDL224C	UBA1	P22515	1024 aa	Known RBP	4.88	□□□□□ -1.63
WHI4	YDL224C	SMI1	P32566	505 aa		4.88	□□□□□ -1.63
WHI4	YDL224C	UIP5	P36137	443 aa		4.88	□□□□□ -1.63
WHI4	YDL224C	YBR137W	P38276	179 aa		4.88	□□□□□ -1.63
WHI4	YDL224C	IDP2	P41939	412 aa		4.88	□□□□□ -1.63
WHI4	YDL224C	IBD2	P53892	351 aa		4.88	□□□□□ -1.63
WHI4	YDL224C	SRN2	Q99176	213 aa		4.88	□□□□□ -1.63
WHI4	YDL224C	OPI3	P05375	206 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	RPL12A	P0CX53	165 aa	Known RBP	4.87	□□□□□ -1.63
WHI4	YDL224C	RPL12B	P0CX54	165 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	KAP104	P38217	918 aa	Known RBP	4.87	□□□□□ -1.63
WHI4	YDL224C	YBP1	P38315	674 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	SIM1	P40472	476 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	FYV8	P46949	817 aa	Known RBP	4.87	□□□□□ -1.63
WHI4	YDL224C	PMT5	P52867	743 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	URC2	Q04411	772 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	HNT3	Q08702	217 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	SNX3	Q08826	162 aa	Known RBP	4.87	□□□□□ -1.63
WHI4	YDL224C	YBR298C-A	Q8TGK4	73 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	SCH9	P11792	824 aa	Known RBP	4.87	□□□□□ -1.63
WHI4	YDL224C	SPS22	P25380	463 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	FMP46	P36141	133 aa	Known RBP	4.87	□□□□□ -1.63
WHI4	YDL224C	YHR177W	P38867	453 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	YAT2	P40017	923 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	SNM1	P40993	198 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	RTT102	P53330	157 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	PPT2	Q12036	173 aa		4.87	□□□□□ -1.63
WHI4	YDL224C	HEM15	P16622	393 aa		4.86	□□□□□ -1.63
WHI4	YDL224C	TPT1	Q12272	230 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 120.1 ms