RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 GPR20Q99678 358 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 TXNRD2Q9NNW7 524 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 ISY1Q9ULR0 285 aaKnown RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 COBLO75128 1261 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 MMP3P08254 477 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 CYP2D6P10635 497 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 RAB27AP51159 221 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 POLGP54098 1239 aaPredicted RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 ALKAL1Q6UXT8 129 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 ZNF296Q8WUU4 475 aaPredicted RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 MTG1Q9BT17 334 aaPredicted RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 UBXN6Q9BZV1 441 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 PDRG1Q9NUG6 133 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 KAT6AQ92794 2004 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 SCN8AQ9UQD0 1980 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 PVALEFA0A1B0GWK0 134 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 RPA1P27694 616 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 ADCY7P51828 1080 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 CTCFLQ8NI51 663 aaPredicted RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 SDR42E1Q8WUS8 393 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 UROC1Q96N76 676 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 CDCA3Q99618 268 aaPredicted RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 C7orf25Q9BPX7 421 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 MAFO75444 373 aaPredicted RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 GTF2H1P32780 548 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 PUS10Q3MIT2 529 aaKnown RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 PDXDC1Q6P996 788 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 CMTR2Q8IYT2 770 aaKnown RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 OTUD5Q96G74 571 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 CLMNQ96JQ2 1002 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 TNMDQ9H2S6 317 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 TPCN1Q9ULQ1 816 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 COL27A1Q8IZC6 1860 aaPredicted RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 KLRF2D3W0D1 207 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 ABLIM1O14639 778 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 SUPT20HL2P0C7V6 817 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 ANXA13P27216 316 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 SARSP49591 514 aaKnown RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 MRPS9P82933 396 aaKnown RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 KCNC3Q14003 757 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 STXBP2Q15833 593 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 GNPTABQ3T906 1256 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 CPLX2Q6PUV4 134 aaKnown RBP7.38□□□□□ -1.23
RTTN-215ENST00000639487 GDF15Q99988 308 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 UBAC1Q9BSL1 405 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 PTPRHQ9HD43 1115 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 GTF2IRD1Q9UHL9 959 aa7.38□□□□□ -1.23
RTTN-215ENST00000639487 TCP10L2B9ZVM9 353 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 TRAF5O00463 557 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 RIOK3O14730 519 aaKnown RBP7.37□□□□□ -1.23
RTTN-215ENST00000639487 NCK2O43639 380 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 HSPA1AP0DMV8 641 aaKnown RBP7.37□□□□□ -1.23
RTTN-215ENST00000639487 HSPA1BP0DMV9 641 aaKnown RBP7.37□□□□□ -1.23
RTTN-215ENST00000639487 CDC27P30260 824 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 RAB3GAP1Q15042 981 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 MAP1SQ66K74 1059 aaPredicted RBP7.37□□□□□ -1.23
RTTN-215ENST00000639487 BLIDQ8IZY5 108 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 NPLOC4Q8TAT6 608 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 ACER1Q8TDN7 264 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 MSANTD3Q96H12 275 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 FAM81BQ96LP2 452 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 NT5C3AQ9H0P0 336 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 PLEKHA5Q9HAU0 1116 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.37□□□□□ -1.23
RTTN-215ENST00000639487 SLC12A7Q9Y666 1083 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 NPHP1O15259 732 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 FAM189A1O60320 539 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 RB1P06400 928 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 HOXA9P31269 272 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 SSRP1Q08945 709 aaKnown RBP7.37□□□□□ -1.23
RTTN-215ENST00000639487 GIT2Q14161 759 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 TMEM67Q5HYA8 995 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 IFFO2Q5TF58 517 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 TRIB2Q92519 343 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 EDC3Q96F86 508 aaKnown RBP7.37□□□□□ -1.23
RTTN-215ENST00000639487 SLC9A7Q96T83 725 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 ADAMTS10Q9H324 1103 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 CHMP3Q9Y3E7 222 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 ZHX2Q9Y6X8 837 aa7.37□□□□□ -1.23
RTTN-215ENST00000639487 ARVCFO00192 962 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 KRT2P35908 639 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 AK2P54819 239 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 ACVR2BQ13705 512 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 TTLL4Q14679 1199 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 DNTTIP2Q5QJE6 756 aaKnown RBP7.36□□□□□ -1.23
RTTN-215ENST00000639487 RESP18Q5W5W9 173 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 RALYLQ86SE5 291 aaKnown RBP7.36□□□□□ -1.23
RTTN-215ENST00000639487 KAT2BQ92831 832 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 TRERF1Q96PN7 1200 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 SEC62Q99442 399 aaKnown RBP7.36□□□□□ -1.23
RTTN-215ENST00000639487 SENP6Q9GZR1 1112 aaPredicted RBP7.36□□□□□ -1.23
RTTN-215ENST00000639487 CYLDQ9NQC7 956 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 CNTN6Q9UQ52 1028 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 CUTAO60888 179 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 EOMESO95936 686 aa7.36□□□□□ -1.23
RTTN-215ENST00000639487 GNAT1P11488 350 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms