RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ACAD9Q9H845 621 aa21.95■■□□□ 1.1
SSH1-209ENST00000551165 KRT31Q15323 416 aa21.95■■□□□ 1.1
SSH1-209ENST00000551165 TRIM47Q96LD4 638 aa21.95■■□□□ 1.1
SSH1-209ENST00000551165 SRRTQ9BXP5 876 aaKnown RBP21.95■■□□□ 1.1
SSH1-209ENST00000551165 LRRC27Q9C0I9 530 aa21.95■■□□□ 1.1
SSH1-209ENST00000551165 ADD3Q9UEY8 706 aaKnown RBP21.95■■□□□ 1.1
SSH1-209ENST00000551165 LOC285556D6RIA3 1793 aa21.95■■□□□ 1.1
SSH1-209ENST00000551165 TESPA1A2RU30 521 aaPredicted RBP21.94■■□□□ 1.1
SSH1-209ENST00000551165 BANK1Q8NDB2 785 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 KIAA1524Q8TCG1 905 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 RIT2Q99578 217 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 RUSC1Q9BVN2 902 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 IMPACTQ9P2X3 320 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 NKRFO15226 690 aaKnown RBP eCLIP21.94■■□□□ 1.1
SSH1-209ENST00000551165 NR3C2P08235 984 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 PRKCSHP14314 528 aaPredicted RBP21.94■■□□□ 1.1
SSH1-209ENST00000551165 CCNE1P24864 410 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 HOXA7P31268 230 aaPredicted RBP21.94■■□□□ 1.1
SSH1-209ENST00000551165 GIT2Q14161 759 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 TCP11X2Q5H9J9 407 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 NIPA1Q7RTP0 329 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 PNMA8AQ86V59 439 aaPredicted RBP21.94■■□□□ 1.1
SSH1-209ENST00000551165 ASCC2Q9H1I8 757 aaPredicted RBP21.94■■□□□ 1.1
SSH1-209ENST00000551165 TAB2Q9NYJ8 693 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 KCNH4Q9UQ05 1017 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 PCDHA2Q9Y5H9 948 aa21.94■■□□□ 1.1
SSH1-209ENST00000551165 KCNJ18B7U540 433 aa21.93■■□□□ 1.1
SSH1-209ENST00000551165 CXCL11O14625 94 aa21.93■■□□□ 1.1
SSH1-209ENST00000551165 FSTL1Q12841 308 aa21.93■■□□□ 1.1
SSH1-209ENST00000551165 KCNJ12Q14500 433 aa21.93■■□□□ 1.1
SSH1-209ENST00000551165 VSIG10LQ86VR7 867 aa21.93■■□□□ 1.1
SSH1-209ENST00000551165 PROCA1Q8NCQ7 364 aaPredicted RBP21.93■■□□□ 1.1
SSH1-209ENST00000551165 VPS16Q9H269 839 aa21.93■■□□□ 1.1
SSH1-209ENST00000551165 ZHX3Q9H4I2 956 aa21.93■■□□□ 1.1
SSH1-209ENST00000551165 BMP2KQ9NSY1 1161 aaPredicted RBP21.93■■□□□ 1.1
SSH1-209ENST00000551165 RSPH10B2B2RC85 870 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 RSPH10BP0C881 870 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 PPIL2Q13356 520 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 LDLRAD1Q5T700 205 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 REEP2Q9BRK0 252 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 PAGR1Q9BTK6 254 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 TUFT1Q9NNX1 390 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 LIMA1Q9UHB6 759 aaKnown RBP21.92■■□□□ 1.1
SSH1-209ENST00000551165 LCTP09848 1927 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 ASTN1O14525 1302 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 RGS20O76081 388 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 KRT18P05783 430 aaKnown RBP21.92■■□□□ 1.1
SSH1-209ENST00000551165 CCZ1BP86790 482 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 CCZ1P86791 482 aaPredicted RBP21.92■■□□□ 1.1
SSH1-209ENST00000551165 CNTN2Q02246 1040 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 EPHA7Q15375 998 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 ARMC9Q7Z3E5 817 aa21.92■■□□□ 1.1
SSH1-209ENST00000551165 EYA4O95677 639 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 COBLL1Q53SF7 1204 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 HERC4Q5GLZ8 1057 aaPredicted RBP21.91■■□□□ 1.1
SSH1-209ENST00000551165 CENPPQ6IPU0 288 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 CSGALNACT2Q8N6G5 542 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 TXNRD2Q9NNW7 524 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 STK24Q9Y6E0 443 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 CNMDO75829 334 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 IRX3P78415 501 aaPredicted RBP21.91■■□□□ 1.1
SSH1-209ENST00000551165 FAM26FQ5R3K3 315 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 LXNQ9BS40 222 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 TELO2Q9Y4R8 837 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 A0A0G2JMZ2 1700 aa21.91■■□□□ 1.1
SSH1-209ENST00000551165 HERVK_113P62684 666 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 NSUN6Q8TEA1 469 aaKnown RBP21.9■■□□□ 1.1
SSH1-209ENST00000551165 AGTPBP1Q9UPW5 1226 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 FRMD3A2A2Y4 597 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 LRRC10BA6NIK2 292 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 CCND2P30279 289 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 CASP5P51878 434 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 COPB1P53618 953 aaKnown RBP21.9■■□□□ 1.1
SSH1-209ENST00000551165 PSMD2Q13200 908 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 GPAT2Q6NUI2 795 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 RINT1Q6NUQ1 792 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 MIER3Q7Z3K6 550 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 CCDC65Q8IXS2 484 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 GUF1Q8N442 669 aaKnown RBP21.9■■□□□ 1.1
SSH1-209ENST00000551165 SPATC1LQ9H0A9 340 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
SSH1-209ENST00000551165 SFI1A8K8P3 1242 aa21.89■■□□□ 1.1
SSH1-209ENST00000551165 CCNE2O96020 404 aa21.89■■□□□ 1.1
SSH1-209ENST00000551165 GSDMDP57764 484 aa21.89■■□□□ 1.1
SSH1-209ENST00000551165 TBX2Q13207 712 aaPredicted RBP21.89■■□□□ 1.1
SSH1-209ENST00000551165 SKILP12757 684 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 PBX1P40424 430 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 MKRN3Q13064 507 aaKnown RBP21.89■■□□□ 1.09
SSH1-209ENST00000551165 NOLC1Q14978 699 aaKnown RBP eCLIP21.89■■□□□ 1.09
SSH1-209ENST00000551165 Q3C1V9 767 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 CEP135Q66GS9 1140 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 SPECC1LQ69YQ0 1117 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 ANKRD35Q8N283 1001 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 THAP9Q9H5L6 903 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 SAMM50Q9Y512 469 aa21.89■■□□□ 1.09
SSH1-209ENST00000551165 N4BP3O15049 544 aa21.88■■□□□ 1.09
SSH1-209ENST00000551165 NCAPG2Q86XI2 1143 aa21.88■■□□□ 1.09
SSH1-209ENST00000551165 RIOX2Q8IUF8 465 aa21.88■■□□□ 1.09
SSH1-209ENST00000551165 NELFCDQ8IXH7 590 aa21.88■■□□□ 1.09
SSH1-209ENST00000551165 BICDL2A1A5D9 508 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms