RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 NEK1Q96PY6 1258 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 CDCA3Q99618 268 aaPredicted RBP20.45■□□□□ 0.86
PVT1-220ENST00000524165 EHMT1Q9H9B1 1298 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 ANAPC4Q9UJX5 808 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 CACNA1GO43497 2377 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 ACACBO00763 2458 aa20.45■□□□□ 0.86
PVT1-220ENST00000524165 GGPS1O95749 300 aa20.44■□□□□ 0.86
PVT1-220ENST00000524165 CLCN5P51795 746 aa20.44■□□□□ 0.86
PVT1-220ENST00000524165 LRRCC1Q9C099 1032 aa20.44■□□□□ 0.86
PVT1-220ENST00000524165 PXMP2Q9NR77 195 aa20.44■□□□□ 0.86
PVT1-220ENST00000524165 PCDHGC5Q9Y5F6 944 aa20.44■□□□□ 0.86
PVT1-220ENST00000524165 CEP250Q9BV73 2442 aa20.44■□□□□ 0.86
PVT1-220ENST00000524165 CHRNA1P02708 482 aa20.43■□□□□ 0.86
PVT1-220ENST00000524165 FGRP09769 529 aa20.43■□□□□ 0.86
PVT1-220ENST00000524165 TGFB3P10600 412 aa20.43■□□□□ 0.86
PVT1-220ENST00000524165 VN1R2Q8NFZ6 395 aa20.43■□□□□ 0.86
PVT1-220ENST00000524165 SEC62Q99442 399 aaKnown RBP20.43■□□□□ 0.86
PVT1-220ENST00000524165 S1PR5Q9H228 398 aa20.43■□□□□ 0.86
PVT1-220ENST00000524165 NR2E1Q9Y466 385 aa20.43■□□□□ 0.86
PVT1-220ENST00000524165 BRD1O95696 1058 aa20.42■□□□□ 0.86
PVT1-220ENST00000524165 LGALS2P05162 132 aa20.42■□□□□ 0.86
PVT1-220ENST00000524165 SRGAP2BP0DMP2 458 aa20.42■□□□□ 0.86
PVT1-220ENST00000524165 HSPD1P10809 573 aaKnown RBP20.42■□□□□ 0.86
PVT1-220ENST00000524165 GHRP10912 638 aa20.42■□□□□ 0.86
PVT1-220ENST00000524165 ADAM17P78536 824 aa20.42■□□□□ 0.86
PVT1-220ENST00000524165 GPATCH4Q5T3I0 446 aaKnown RBP20.42■□□□□ 0.86
PVT1-220ENST00000524165 TMEM184AQ6ZMB5 413 aa20.42■□□□□ 0.86
PVT1-220ENST00000524165 SETD4Q9NVD3 440 aa20.42■□□□□ 0.86
PVT1-220ENST00000524165 PER2O15055 1255 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 SORBS3O60504 671 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 RBM10P98175 930 aaKnown RBP20.41■□□□□ 0.86
PVT1-220ENST00000524165 SP2Q02086 613 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 UBE3AQ05086 875 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 PUM1Q14671 1186 aaKnown RBP eCLIP20.41■□□□□ 0.86
PVT1-220ENST00000524165 DUSP6Q16828 381 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 CRIPAKQ8N1N5 446 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 PANK1Q8TE04 598 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 TTC14Q96N46 770 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 MLXIPQ9HAP2 919 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
PVT1-220ENST00000524165 FOXP2O15409 715 aa20.4■□□□□ 0.86
PVT1-220ENST00000524165 UBA1P22314 1058 aaKnown RBP20.4■□□□□ 0.86
PVT1-220ENST00000524165 LPIN1Q14693 890 aa20.4■□□□□ 0.86
PVT1-220ENST00000524165 CDC37Q16543 378 aaPredicted RBP20.4■□□□□ 0.86
PVT1-220ENST00000524165 MICAL1Q8TDZ2 1067 aa20.4■□□□□ 0.86
PVT1-220ENST00000524165 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
PVT1-220ENST00000524165 CNTNAP3BQ96NU0 1288 aa20.4■□□□□ 0.86
PVT1-220ENST00000524165 CNTNAP3Q9BZ76 1288 aa20.4■□□□□ 0.86
PVT1-220ENST00000524165 MRPL11Q9Y3B7 192 aaKnown RBP20.4■□□□□ 0.86
PVT1-220ENST00000524165 FRYLO94915 3013 aa20.4■□□□□ 0.86
PVT1-220ENST00000524165 KCNC3Q14003 757 aa20.39■□□□□ 0.85
PVT1-220ENST00000524165 PDE12Q6L8Q7 609 aaKnown RBP20.39■□□□□ 0.85
PVT1-220ENST00000524165 ANKRD54Q6NXT1 300 aa20.39■□□□□ 0.85
PVT1-220ENST00000524165 NPAS4Q8IUM7 802 aa20.39■□□□□ 0.85
PVT1-220ENST00000524165 PDCD2LQ9BRP1 358 aa20.39■□□□□ 0.85
PVT1-220ENST00000524165 SEMA4AQ9H3S1 761 aa20.39■□□□□ 0.85
PVT1-220ENST00000524165 MFSD1Q9H3U5 465 aa20.39■□□□□ 0.85
PVT1-220ENST00000524165 SMARCA5O60264 1052 aaPredicted RBP20.38■□□□□ 0.85
PVT1-220ENST00000524165 MGAT3Q09327 533 aa20.38■□□□□ 0.85
PVT1-220ENST00000524165 ZMYM1Q5SVZ6 1142 aa20.38■□□□□ 0.85
PVT1-220ENST00000524165 LMBR1Q8WVP7 490 aa20.38■□□□□ 0.85
PVT1-220ENST00000524165 ZBTB40Q9NUA8 1239 aa20.38■□□□□ 0.85
PVT1-220ENST00000524165 MYCLP12524 364 aaPredicted RBP20.37■□□□□ 0.85
PVT1-220ENST00000524165 HOXB8P17481 243 aaPredicted RBP20.37■□□□□ 0.85
PVT1-220ENST00000524165 SP100P23497 879 aaPredicted RBP20.37■□□□□ 0.85
PVT1-220ENST00000524165 HSD17B4P51659 736 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 ARHGAP4P98171 946 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 GHRHRQ02643 423 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 TAF2Q6P1X5 1199 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 SYCE2Q6PIF2 218 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 TSHZ1Q6ZSZ6 1077 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 VSIG10LQ86VR7 867 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 RASGRP4Q8TDF6 673 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 UBA5Q9GZZ9 404 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 TOMM22Q9NS69 142 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 DOCK5Q9H7D0 1870 aa20.37■□□□□ 0.85
PVT1-220ENST00000524165 NRCAMQ92823 1304 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 NOP56O00567 594 aaKnown RBP20.36■□□□□ 0.85
PVT1-220ENST00000524165 CFBP00751 764 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 LMNAP02545 664 aaKnown RBP20.36■□□□□ 0.85
PVT1-220ENST00000524165 GOLGA8HP0CJ92 632 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 STAG3L1P0CL83 205 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 TECP42680 631 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 PAN2Q504Q3 1202 aaKnown RBP20.36■□□□□ 0.85
PVT1-220ENST00000524165 FBXO47Q5MNV8 452 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 LINC01599Q8WXQ3 324 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 FTHL17Q9BXU8 183 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 CPVLQ9H3G5 476 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 TSHZ2Q9NRE2 1034 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 MAP3K20Q9NYL2 800 aaKnown RBP20.36■□□□□ 0.85
PVT1-220ENST00000524165 ZNF215Q9UL58 517 aaPredicted RBP20.36■□□□□ 0.85
PVT1-220ENST00000524165 PCDHB12Q9Y5F1 795 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 FNDC1Q4ZHG4 1894 aaPredicted RBP20.36■□□□□ 0.85
PVT1-220ENST00000524165 OTOGLQ3ZCN5 2332 aa20.36■□□□□ 0.85
PVT1-220ENST00000524165 LOXHD1Q8IVV2 1947 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 ANGPT1Q15389 498 aa20.35■□□□□ 0.85
PVT1-220ENST00000524165 RRP12Q5JTH9 1297 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms