RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SLC52A2Q9HAB3 445 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 SLC5A4Q9NY91 659 aa6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 APOBEC2Q9Y235 224 aaKnown RBP6.1□□□□□ -1.43
HMGB1P23-201ENST00000518743 POLR3AO14802 1390 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 NSD2O96028 1365 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 PALLDQ8WX93 1383 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 F8W735 103 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 GSNP06396 782 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 ENDOUP21128 410 aaKnown RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 GRIA2P42262 883 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 STRN3Q13033 797 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 NOGQ13253 232 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 TTF1Q15361 905 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 ACBD5Q5T8D3 534 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 DEFB123Q8N688 67 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 SLC7A14Q8TBB6 771 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 EZH1Q92800 747 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 PLVAPQ9BX97 442 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 TPX2Q9ULW0 747 aaKnown RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 STXBP5LQ9Y2K9 1186 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 DAGLAQ9Y4D2 1042 aa6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 TNPO3Q9Y5L0 923 aaKnown RBP6.09□□□□□ -1.43
HMGB1P23-201ENST00000518743 PAPPA2Q9BXP8 1791 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 TRBV23OR9-2A0A075B6M9 112 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 KRBA1A5PL33 1030 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 GPR39O43194 453 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 SIGLEC6O43699 453 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 ARHGEF15O94989 841 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 JMJD7P0C870 316 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 RAB6AP20340 208 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 PPP2R5AQ15172 486 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 NFE2Q16621 373 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 SLC35F1Q5T1Q4 408 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 E4F1Q66K89 784 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 IQCEQ6IPM2 695 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 CDH24Q86UP0 819 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 SYNE4Q8N205 404 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 WNK4Q96J92 1243 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 PRDM14Q9GZV8 571 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 SAGE1Q9NXZ1 904 aa6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 SPTBN5Q9NRC6 3674 aaKnown RBP6.08□□□□□ -1.44
HMGB1P23-201ENST00000518743 TCRBV16S1A1N1A0A5B0 115 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 C9orf172C9J069 976 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 TRAF5O00463 557 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 GSTA4O15217 222 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PLIN1O60240 522 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 SLITRK5O94991 958 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 CELF2O95319 508 aaKnown RBP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 NEK2P51955 445 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 TBX4P57082 545 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 MAP3K12Q12852 859 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 FAM50AQ14320 339 aaKnown RBP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PPP2R5DQ14738 602 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZCCHC8Q6NZY4 707 aaKnown RBP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PKN3Q6P5Z2 889 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 Q6ZS46 218 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PODNQ7Z5L7 613 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 UBE3DQ7Z6J8 389 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 SAPCD2Q86UD0 394 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PASD1Q8IV76 773 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 CCDC146Q8IYE0 955 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 IFNL3Q8IZI9 196 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 TMEM145Q8NBT3 493 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PIWIL2Q8TC59 973 aaKnown RBP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 BRF1Q92994 677 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 LENG1Q96BZ8 264 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 ALG1Q9BT22 464 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 SEMA6CQ9H3T2 930 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 CABP5Q9NP86 173 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 PRDM5Q9NQX1 630 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 CHST7Q9NS84 486 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 GTF2IRD1Q9UHL9 959 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 SCN11AQ9UI33 1791 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 LAMA3Q16787 3333 aa6.07□□□□□ -1.44
HMGB1P23-201ENST00000518743 ADAMTSL1Q8N6G6 1762 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 RNF123Q5XPI4 1314 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GOLGA6CA6NDK9 693 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GOLGA6BA6NDN3 693 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 TBX1O43435 398 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 KPNA6O60684 536 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GAS7O60861 476 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 CAND2O75155 1236 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GOLGA6DP0CG33 693 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 SPATA31C1P0DKV0 1188 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GLB1P16278 677 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 ECI1P42126 302 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 GSK3AP49840 483 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 ITKQ08881 620 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 KCNAB2Q13303 367 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 STAT4Q14765 748 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 TESK1Q15569 626 aa6.06□□□□□ -1.44
HMGB1P23-201ENST00000518743 SFRP5Q5T4F7 317 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms