RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SPDYE4A6NLX3 237 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 FAM86B1E9PN63 330 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 PITPNM1O00562 1244 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 MAFGO15525 162 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 FAM86B2P0C5J1 330 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 MARK3P27448 753 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 GNA11P29992 359 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 NLRP5P59047 1200 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 SMAD3P84022 425 aaKnown RBP9.43□□□□□ -0.9
HDAC6-221ENST00000477561 RABEP1Q15276 862 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 GPR153Q6NV75 609 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 CPLX2Q6PUV4 134 aaKnown RBP9.43□□□□□ -0.9
HDAC6-221ENST00000477561 PLA2G4DQ86XP0 818 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 NECAB1Q8N987 351 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 CCDC148Q8NFR7 591 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 SEPT1Q8WYJ6 367 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 HERVK_113Q902F9 699 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 ATP6V0A1Q93050 837 aa9.43□□□□□ -0.9
HDAC6-221ENST00000477561 FTOQ9C0B1 505 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC6-221ENST00000477561 AGO4Q9HCK5 861 aaKnown RBP9.43□□□□□ -0.9
HDAC6-221ENST00000477561 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-221ENST00000477561 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-221ENST00000477561 MEIS1O00470 390 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 TREHO43280 583 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 PFKFB2O60825 505 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 DEXIO95424 95 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 LARGE1O95461 756 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 CKBP12277 381 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 SELPP16109 830 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 PBX2P40425 430 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 NEK4P51957 841 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 PTK7Q13308 1070 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-221ENST00000477561 ZNF618Q5T7W0 954 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 RASIP1Q5U651 963 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 LRRC8DQ7L1W4 858 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 TEX2Q8IWB9 1127 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 CCDC155Q8N6L0 562 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 CAGE1Q8TC20 777 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 BICD2Q8TD16 824 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 CRYGNQ8WXF5 182 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 GLG1Q92896 1179 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 SDF4Q9BRK5 362 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 JPH1Q9HDC5 661 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-221ENST00000477561 GJB4Q9NTQ9 266 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 MTMR10Q9NXD2 777 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 SLC9A2Q9UBY0 812 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 ZNF215Q9UL58 517 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-221ENST00000477561 KCNJ14Q9UNX9 436 aa9.42□□□□□ -0.9
HDAC6-221ENST00000477561 IGLV3-22A0A075B6J6 115 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 CTDNEP1O95476 244 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 CYP3A4P08684 503 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 RFC2P35250 354 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 THPOP40225 353 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 RABGGTBP53611 331 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 ACTR2P61160 394 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 GPNMBQ14956 572 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 ANKRD1Q15327 319 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 ME3Q16798 604 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 TRIM71Q2Q1W2 868 aaKnown RBP9.41□□□□□ -0.9
HDAC6-221ENST00000477561 PRR16Q569H4 304 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 HSCBQ8IWL3 235 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 AFAP1L1Q8TED9 768 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 IL17RAQ96F46 866 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 PCYT2Q99447 389 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 MTIF3Q9H2K0 278 aaKnown RBP9.41□□□□□ -0.9
HDAC6-221ENST00000477561 TTYH1Q9H313 450 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-221ENST00000477561 SEMA6BQ9H3T3 888 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 SH3GLB2Q9NR46 395 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 PCDHA4Q9UN74 947 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 SLC4A7Q9Y6M7 1214 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 SCN5AQ14524 2016 aa9.41□□□□□ -0.9
HDAC6-221ENST00000477561 NFASCO94856 1347 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 IPO5O00410 1097 aaKnown RBP9.4□□□□□ -0.9
HDAC6-221ENST00000477561 DHX15O43143 795 aaKnown RBP9.4□□□□□ -0.9
HDAC6-221ENST00000477561 EDIL3O43854 480 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 ST18O60284 1047 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 NBNO60934 754 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 CDKL5O76039 1030 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 CCNE2O96020 404 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 PFKMP08237 780 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 CTSHP09668 335 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 GNAT1P11488 350 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 ACTN1P12814 892 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 DNAJB2P25686 324 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 IGBP1P78318 339 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 PPFIA1Q13136 1202 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 TCTN1Q2MV58 587 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 MCTP2Q6DN12 878 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 TRAF7Q6Q0C0 670 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 NIPA1Q7RTP0 329 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 SERINC5Q86VE9 423 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 BLIDQ8IZY5 108 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 TBCKQ8TEA7 893 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 LMBR1Q8WVP7 490 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 GJA10Q969M2 543 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 SNX21Q969T3 373 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 TIFAQ96CG3 184 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms