RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 GPR20Q99678 358 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 POLR3EQ9NVU0 708 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 SLC9A2Q9UBY0 812 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 TTC28Q96AY4 2481 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 NOP56O00567 594 aaKnown RBP16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 TOB1P50616 345 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 PURAQ00577 322 aaKnown RBP16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 KRT76Q01546 638 aa16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 RESTQ13127 1097 aa16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 ZNF746Q6NUN9 644 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 SLC17A8Q8NDX2 589 aa16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 SENP6Q9GZR1 1112 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 PKD2L1Q9P0L9 805 aa16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 ELP1O95163 1332 aa16.89■□□□□ 0.29
CDC42SE1-203ENST00000470278 A0A1W2PQ45 241 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 A0A1W2PQY0 241 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 GAS7O60861 476 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 PSMD10O75832 226 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 F2P00734 622 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 RTP1P59025 263 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 SNX17Q15036 470 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 LRCH2Q5VUJ6 765 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 SMAP1Q8IYB5 467 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 HAS1Q92839 578 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 GUCD1Q96NT3 240 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 TEKT3Q9BXF9 490 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 TCEAL9Q9UHQ7 104 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 EMSYQ7Z589 1322 aa16.88■□□□□ 0.29
CDC42SE1-203ENST00000470278 ATG7O95352 703 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 CCNE2O96020 404 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 MCM7P33993 719 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 ACTR2P61160 394 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 CALCRLQ16602 461 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 CXCL17Q6UXB2 119 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 GLT1D1Q96MS3 346 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 MTMR9Q96QG7 549 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 MTG1Q9BT17 334 aaPredicted RBP16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 STXBP5LQ9Y2K9 1186 aa16.87■□□□□ 0.29
CDC42SE1-203ENST00000470278 LAD1O00515 517 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 DLL1O00548 723 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 SORBS3O60504 671 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 SFNP31947 248 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 DDIT3P35638 169 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 TCF7P36402 384 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 PPP2R5CQ13362 524 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 C1orf53Q5VUE5 145 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 C16orf70Q9BSU1 422 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 KATNAL1Q9BW62 490 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 SEZ6LQ9BYH1 1024 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
CDC42SE1-203ENST00000470278 CHD7Q9P2D1 2997 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 IGKV6D-21A0A0A0MT36 114 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 GSTTP1A0A1W2PQM5 241 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 DDX39AO00148 427 aaKnown RBP16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 LGR5O75473 907 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 LGALS2P05162 132 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 MYL3P08590 195 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 OR52Z1P0C646 297 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 ZNF286BP0CG31 522 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 ATP2B1P20020 1258 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 JAK3P52333 1124 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 SP4Q02446 784 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 SPIRE1Q08AE8 756 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 PKP1Q13835 747 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 NBR1Q14596 966 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 ZNF174Q15697 407 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 ABHD15Q6UXT9 468 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 SH3RF1Q7Z6J0 888 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 C4orf32Q8N8J7 132 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 KAT2BQ92831 832 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 UNC45AQ9H3U1 944 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 ZNF215Q9UL58 517 aaPredicted RBP16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 TELO2Q9Y4R8 837 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 WDR81Q562E7 1941 aa16.85■□□□□ 0.29
CDC42SE1-203ENST00000470278 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 HAS3O00219 553 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 BRD1O95696 1058 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 BMP15O95972 392 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 F13A1P00488 732 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms