RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 KRT18P05783 430 aaKnown RBP22.42■■□□□ 1.18
CLN5-201ENST00000377453 PRLRP16471 622 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 ATP2B4P23634 1241 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 SMARCA1P28370 1054 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 NFIAQ12857 509 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 DOK7Q18PE1 504 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 ATP6V0A2Q9Y487 856 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 SAMM50Q9Y512 469 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 SERPING1P05155 500 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 CYP11B2P19099 503 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 SHMT1P34896 483 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 KLHL30Q0D2K2 578 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 PDCLQ13371 301 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 ADAM9Q13443 819 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 ARSHQ5FYA8 562 aa22.42■■□□□ 1.18
CLN5-201ENST00000377453 IGKV6D-41A0A0C4DH26 115 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 SSU72P8A0A1W2PR75 194 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 EPHB4P54760 987 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 TRIM59Q8IWR1 403 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 EMILIN3Q9NT22 766 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 GRIN2DO15399 1336 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 PABPC4Q13310 644 aaKnown RBP eCLIP22.41■■□□□ 1.18
CLN5-201ENST00000377453 PPP4R3AQ6IN85 833 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 KCTD10Q9H3F6 313 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 USP40Q9NVE5 1235 aa22.41■■□□□ 1.18
CLN5-201ENST00000377453 AJAP1Q9UKB5 411 aaPredicted RBP22.41■■□□□ 1.18
CLN5-201ENST00000377453 GRID2IPA4D2P6 1211 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 KCNH2Q12809 1159 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 PSMD2Q13200 908 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 CASKIN2Q8WXE0 1202 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 CAPS2Q9BXY5 557 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 SERPINB13Q9UIV8 391 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 SERPINB2P05120 415 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 NT5C2P49902 561 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 TCP10Q12799 353 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 CFAP221Q4G0U5 840 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 GJB7Q6PEY0 223 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 C15orf52Q6ZUT6 534 aaKnown RBP22.4■■□□□ 1.18
CLN5-201ENST00000377453 PACS2Q86VP3 889 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 IQCDQ96DY2 449 aa22.4■■□□□ 1.18
CLN5-201ENST00000377453 MYH7BA7E2Y1 1941 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 ABCB11O95342 1321 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 RSPH10B2B2RC85 870 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 RSPH10BP0C881 870 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 EPS15P42566 896 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 ORC2Q13416 577 aaPredicted RBP22.39■■□□□ 1.18
CLN5-201ENST00000377453 NAB2Q15742 525 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 QRICH1Q2TAL8 776 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 GANQ9H2C0 597 aa22.39■■□□□ 1.18
CLN5-201ENST00000377453 BTAF1O14981 1849 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 ZBTB5O15062 677 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 SHOX2O60902 331 aaPredicted RBP22.39■■□□□ 1.17
CLN5-201ENST00000377453 NR2F2P24468 414 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 PTK2Q05397 1052 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 PROM2Q8N271 834 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 BCAS4Q8TDM0 211 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 FAM163AQ96GL9 167 aaPredicted RBP22.39■■□□□ 1.17
CLN5-201ENST00000377453 RUFY1Q96T51 708 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 SH3GL2Q99962 352 aa22.39■■□□□ 1.17
CLN5-201ENST00000377453 BMP2KQ9NSY1 1161 aaPredicted RBP22.39■■□□□ 1.17
CLN5-201ENST00000377453 RBAK-RBAKDNI3L0D1 243 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 HSF2BPO75031 334 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 MYBP10242 640 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 CYP4A11Q02928 519 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 KCNA1Q09470 495 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 ASIC2Q16515 512 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 SLC18A3Q16572 532 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 DCAF17Q5H9S7 520 aaPredicted RBP22.38■■□□□ 1.17
CLN5-201ENST00000377453 CCDC65Q8IXS2 484 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 RGL2O15211 777 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 RAD51CO43502 376 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 MRPL12P52815 198 aaKnown RBP22.38■■□□□ 1.17
CLN5-201ENST00000377453 ITIH3Q06033 890 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 PRR16Q569H4 304 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 ZNF571Q7Z3V5 609 aaPredicted RBP22.38■■□□□ 1.17
CLN5-201ENST00000377453 TSPYL1Q9H0U9 437 aa22.38■■□□□ 1.17
CLN5-201ENST00000377453 ZNF233A6NK53 670 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 POLD1P28340 1107 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 CORO7P57737 925 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 SFR1Q86XK3 245 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 DDX42Q86XP3 938 aaKnown RBP eCLIP22.37■■□□□ 1.17
CLN5-201ENST00000377453 KCNQ5Q9NR82 932 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 PCDHA1Q9Y5I3 950 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 SFI1A8K8P3 1242 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 hCG_1984214I3L0E3 225 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 KCNK3O14649 394 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 HOXD13P35453 343 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 PPFIA1Q13136 1202 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 USH1GQ495M9 461 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 MEI1Q5TIA1 1274 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 ZNF713Q8N859 430 aaPredicted RBP22.37■■□□□ 1.17
CLN5-201ENST00000377453 INPP4AQ96PE3 977 aaPredicted RBP22.37■■□□□ 1.17
CLN5-201ENST00000377453 AP1M1Q9BXS5 423 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 ANO3Q9BYT9 981 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 HDAC9Q9UKV0 1011 aa22.37■■□□□ 1.17
CLN5-201ENST00000377453 ATF5Q9Y2D1 282 aaPredicted RBP22.37■■□□□ 1.17
CLN5-201ENST00000377453 AFF2P51816 1311 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 CLIC2O15247 247 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 GYS1P13807 737 aa22.36■■□□□ 1.17
CLN5-201ENST00000377453 CASP4P49662 377 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms