RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 RASIP1Q5U651 963 aa23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 HERVK_113Q902F9 699 aa23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 VWCEQ96DN2 955 aa23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 TANC1Q9C0D5 1861 aa23.02■■□□□ 1.28
HCFC1R1-202ENST00000354679 IGLV3-22A0A075B6J6 115 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 LARGE1O95461 756 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 PFKMP08237 780 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 HOXC8P31273 242 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 DEFB128Q7Z7B8 93 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 DEFB123Q8N688 67 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 GTF3C6Q969F1 213 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 MTIF3Q9H2K0 278 aaKnown RBP23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 RNPEPQ9H4A4 650 aa23.01■■□□□ 1.27
HCFC1R1-202ENST00000354679 CTDNEP1O95476 244 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 SELPP16109 830 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 SETQ01105 290 aaPredicted RBP23■■□□□ 1.27
HCFC1R1-202ENST00000354679 TRIM71Q2Q1W2 868 aaKnown RBP23■■□□□ 1.27
HCFC1R1-202ENST00000354679 GALNT17Q6IS24 598 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 Q7L0L9 218 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 OTOP2Q7RTS6 562 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 SERINC5Q86VE9 423 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 BLIDQ8IZY5 108 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 NECAB1Q8N987 351 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 DAGLBQ8NCG7 672 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 GLG1Q92896 1179 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 ATP6V0A1Q93050 837 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 WNT8BQ93098 351 aa23■■□□□ 1.27
HCFC1R1-202ENST00000354679 TRIP12Q14669 1992 aaPredicted RBP23■■□□□ 1.27
HCFC1R1-202ENST00000354679 SCN5AQ14524 2016 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 DTNBO60941 627 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 GNAT1P11488 350 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 CKBP12277 381 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 CIITAP33076 1130 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 ACTR2P61160 394 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 LRRC8DQ7L1W4 858 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 C22orf23Q9BZE7 217 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 SMARCAD1Q9H4L7 1026 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 SETD4Q9NVD3 440 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 ERAP1Q9NZ08 941 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 CXXC1Q9P0U4 656 aaPredicted RBP22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 EMSYQ7Z589 1322 aa22.99■■□□□ 1.27
HCFC1R1-202ENST00000354679 DDX39AO00148 427 aaKnown RBP22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 TREHO43280 583 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 LGR5O75473 907 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 NPY5RQ15761 445 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 PRR16Q569H4 304 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 FAM109BQ6ICB4 259 aaPredicted RBP22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 PCYT2Q99447 389 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 ZNF577Q9BSK1 485 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 AZI2Q9H6S1 392 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 ORC3Q9UBD5 711 aaPredicted RBP22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 KCNJ14Q9UNX9 436 aa22.98■■□□□ 1.27
HCFC1R1-202ENST00000354679 M0R2N6 131 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 IPO5O00410 1097 aaKnown RBP22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 XBP1P17861 261 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 MARK3P27448 753 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 TBCKQ8TEA7 893 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 LMBR1Q8WVP7 490 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 WASF1Q92558 559 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 UIMC1Q96RL1 719 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 PHF20Q9BVI0 1012 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 FTOQ9C0B1 505 aaKnown RBP eCLIP22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 NRCAMQ92823 1304 aa22.97■■□□□ 1.27
HCFC1R1-202ENST00000354679 ZBBXA8MT70 800 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 DHX15O43143 795 aaKnown RBP22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 EDIL3O43854 480 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 PARNO95453 639 aaKnown RBP22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 CCNE2O96020 404 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 USP11P51784 963 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 PPFIA1Q13136 1202 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 ZNF618Q5T7W0 954 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 ZNF697Q5TEC3 545 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 TRAF7Q6Q0C0 670 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 LENG9Q96B70 501 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 TBC1D22BQ9NU19 505 aa22.96■■□□□ 1.27
HCFC1R1-202ENST00000354679 ATG7O95352 703 aa22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 ACTN1P12814 892 aa22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 THPOP40225 353 aa22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 ADAM17P78536 824 aa22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 GPNMBQ14956 572 aa22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 NSUN7Q8NE18 718 aaKnown RBP22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 KIF2CQ99661 725 aa22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 SLC4A7Q9Y6M7 1214 aa22.95■■□□□ 1.26
HCFC1R1-202ENST00000354679 GRXCR1A8MXD5 290 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 FDPSP14324 419 aaKnown RBP22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 STAT5BP51692 787 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 NONOQ15233 471 aaKnown RBP eCLIP22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 GRIK4Q16099 956 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 ABHD15Q6UXT9 468 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 PLPPR4Q7Z2D5 763 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 KRT25Q7Z3Z0 450 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 GJB4Q9NTQ9 266 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 MTMR10Q9NXD2 777 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 LIMCH1Q9UPQ0 1083 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 TET1Q8NFU7 2136 aa22.94■■□□□ 1.26
HCFC1R1-202ENST00000354679 NBNO60934 754 aa22.93■■□□□ 1.26
HCFC1R1-202ENST00000354679 CXCL10P02778 98 aa22.93■■□□□ 1.26
HCFC1R1-202ENST00000354679 DNAJB2P25686 324 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms