RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 OTOP2Q7RTS6 562 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 PLA2G4DQ86XP0 818 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 RASGRP4Q8TDF6 673 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 ATP6V0A1Q93050 837 aa31.45■■■□□ 2.63
ATPAF1-201ENST00000329231 FAM86B1E9PN63 330 aa31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 PARNO95453 639 aaKnown RBP31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 FAM86B2P0C5J1 330 aa31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 NEK4P51957 841 aa31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 HIC1Q14526 733 aa31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 ZNF697Q5TEC3 545 aa31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 VWCEQ96DN2 955 aa31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 RNPEPQ9H4A4 650 aa31.44■■■□□ 2.62
ATPAF1-201ENST00000329231 CKBP12277 381 aa31.43■■■□□ 2.62
ATPAF1-201ENST00000329231 LRRC8DQ7L1W4 858 aa31.43■■■□□ 2.62
ATPAF1-201ENST00000329231 SERINC5Q86VE9 423 aa31.43■■■□□ 2.62
ATPAF1-201ENST00000329231 GLG1Q92896 1179 aa31.43■■■□□ 2.62
ATPAF1-201ENST00000329231 SMARCAD1Q9H4L7 1026 aa31.43■■■□□ 2.62
ATPAF1-201ENST00000329231 ERAP1Q9NZ08 941 aa31.43■■■□□ 2.62
ATPAF1-201ENST00000329231 PCDHA4Q9UN74 947 aa31.43■■■□□ 2.62
ATPAF1-201ENST00000329231 ACTN1P12814 892 aa31.42■■■□□ 2.62
ATPAF1-201ENST00000329231 SETQ01105 290 aaPredicted RBP31.42■■■□□ 2.62
ATPAF1-201ENST00000329231 ITGB3BPQ13352 177 aaPredicted RBP31.42■■■□□ 2.62
ATPAF1-201ENST00000329231 C8orf34Q49A92 452 aa31.42■■■□□ 2.62
ATPAF1-201ENST00000329231 GALNT17Q6IS24 598 aa31.42■■■□□ 2.62
ATPAF1-201ENST00000329231 C22orf23Q9BZE7 217 aa31.42■■■□□ 2.62
ATPAF1-201ENST00000329231 CXXC1Q9P0U4 656 aaPredicted RBP31.42■■■□□ 2.62
ATPAF1-201ENST00000329231 IGLV3-22A0A075B6J6 115 aa31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 TRIM71Q2Q1W2 868 aaKnown RBP31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 FTOQ9C0B1 505 aaKnown RBP eCLIP31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 SETD4Q9NVD3 440 aa31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 MTMR10Q9NXD2 777 aa31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 GTF3C3Q9Y5Q9 886 aa31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 EMSYQ7Z589 1322 aa31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 STK36Q9NRP7 1315 aa31.41■■■□□ 2.62
ATPAF1-201ENST00000329231 CIITAP33076 1130 aa31.4■■■□□ 2.62
ATPAF1-201ENST00000329231 ACTR2P61160 394 aa31.4■■■□□ 2.62
ATPAF1-201ENST00000329231 AIFM3Q96NN9 605 aa31.4■■■□□ 2.62
ATPAF1-201ENST00000329231 AZI2Q9H6S1 392 aa31.4■■■□□ 2.62
ATPAF1-201ENST00000329231 NRCAMQ92823 1304 aa31.4■■■□□ 2.62
ATPAF1-201ENST00000329231 ZBBXA8MT70 800 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 IPO5O00410 1097 aaKnown RBP31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 TREHO43280 583 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 LGR5O75473 907 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 XBP1P17861 261 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 BLIDQ8IZY5 108 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 DAGLBQ8NCG7 672 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 WNT8BQ93098 351 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 SLC4A7Q9Y6M7 1214 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 TANC1Q9C0D5 1861 aa31.39■■■□□ 2.62
ATPAF1-201ENST00000329231 TRIP12Q14669 1992 aaPredicted RBP31.38■■■□□ 2.61
ATPAF1-201ENST00000329231 THPOP40225 353 aa31.38■■■□□ 2.61
ATPAF1-201ENST00000329231 USP11P51784 963 aa31.38■■■□□ 2.61
ATPAF1-201ENST00000329231 ME3Q16798 604 aa31.38■■■□□ 2.61
ATPAF1-201ENST00000329231 ZNF618Q5T7W0 954 aa31.38■■■□□ 2.61
ATPAF1-201ENST00000329231 ZNF577Q9BSK1 485 aa31.38■■■□□ 2.61
ATPAF1-201ENST00000329231 LAMA2P24043 3122 aaKnown RBP31.38■■■□□ 2.61
ATPAF1-201ENST00000329231 TMEM265A0A087WTH1 108 aa31.37■■■□□ 2.61
ATPAF1-201ENST00000329231 DNAJB2P25686 324 aa31.37■■■□□ 2.61
ATPAF1-201ENST00000329231 MARK3P27448 753 aa31.37■■■□□ 2.61
ATPAF1-201ENST00000329231 PRR16Q569H4 304 aa31.37■■■□□ 2.61
ATPAF1-201ENST00000329231 LMBR1Q8WVP7 490 aa31.37■■■□□ 2.61
ATPAF1-201ENST00000329231 WASF1Q92558 559 aa31.37■■■□□ 2.61
ATPAF1-201ENST00000329231 TBC1D22BQ9NU19 505 aa31.37■■■□□ 2.61
ATPAF1-201ENST00000329231 SCN5AQ14524 2016 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 DDX39AO00148 427 aaKnown RBP31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 ATG7O95352 703 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 CTDNEP1O95476 244 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 ADAM17P78536 824 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 PPFIA1Q13136 1202 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 NECAB1Q8N987 351 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 TNPO1Q92973 898 aaKnown RBP31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 GTF3C6Q969F1 213 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 PCYT2Q99447 389 aa31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 ORC3Q9UBD5 711 aaPredicted RBP31.36■■■□□ 2.61
ATPAF1-201ENST00000329231 GRXCR1A8MXD5 290 aa31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 DHX15O43143 795 aaKnown RBP31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 CAND2O75155 1236 aa31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 GPNMBQ14956 572 aa31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 PLPPR4Q7Z2D5 763 aa31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 TBCKQ8TEA7 893 aa31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 FAM161BQ96MY7 647 aa31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 SEMA6BQ9H3T3 888 aa31.35■■■□□ 2.61
ATPAF1-201ENST00000329231 RSPH10B2B2RC85 870 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 M0R2N6 131 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 NBNO60934 754 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 CCNE2O96020 404 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 CXCL10P02778 98 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 RSPH10BP0C881 870 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 STAT5BP51692 787 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 NPY5RQ15761 445 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 TRAF7Q6Q0C0 670 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 TIFAQ96CG3 184 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 PHF20Q9BVI0 1012 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 PBX4Q9BYU1 374 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 TCEAL9Q9UHQ7 104 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 KCNJ14Q9UNX9 436 aa31.34■■■□□ 2.61
ATPAF1-201ENST00000329231 BAIAP3O94812 1187 aa31.33■■■□□ 2.61
ATPAF1-201ENST00000329231 LARGE1O95461 756 aa31.33■■■□□ 2.61
ATPAF1-201ENST00000329231 RAB30Q15771 203 aa31.33■■■□□ 2.61
ATPAF1-201ENST00000329231 GRIK4Q16099 956 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms