RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 SGT1Q08446 395 aa1.84□□□□□ -2.11
snR56snR56 HIS4P00815 799 aaKnown RBP1.83□□□□□ -2.12
snR56snR56 GAL80P04387 435 aa1.83□□□□□ -2.12
snR56snR56 MSI1P13712 422 aa1.83□□□□□ -2.12
snR56snR56 CDC50P25656 391 aa1.83□□□□□ -2.12
snR56snR56 ZUO1P32527 433 aaKnown RBP1.83□□□□□ -2.12
snR56snR56 FLC2P39719 783 aa1.83□□□□□ -2.12
snR56snR56 LYS14P40971 790 aa1.83□□□□□ -2.12
snR56snR56 TFG2P41896 400 aaPredicted RBP1.83□□□□□ -2.12
snR56snR56 BNS1P50084 137 aa1.83□□□□□ -2.12
snR56snR56 DUO1P53168 247 aaKnown RBP1.83□□□□□ -2.12
snR56snR56 RIF2Q06208 395 aa1.83□□□□□ -2.12
snR56snR56 ORT1Q12375 292 aa1.83□□□□□ -2.12
snR56snR56 YJR112W-AQ3E743 109 aa1.83□□□□□ -2.12
snR56snR56 RAD57P25301 460 aa1.82□□□□□ -2.12
snR56snR56 APE2P32454 952 aaKnown RBP1.82□□□□□ -2.12
snR56snR56 MRPL27P36526 146 aaPredicted RBP1.82□□□□□ -2.12
snR56snR56 HSP31Q04432 237 aa1.82□□□□□ -2.12
snR56snR56 CYM1P32898 989 aa1.81□□□□□ -2.12
snR56snR56 PFF1P38244 976 aa1.81□□□□□ -2.12
snR56snR56 IES5P40060 125 aa1.81□□□□□ -2.12
snR56snR56 IOC4Q04213 475 aa1.81□□□□□ -2.12
snR56snR56 TAP42Q04372 366 aa1.81□□□□□ -2.12
snR56snR56 MCH1Q07376 486 aa1.81□□□□□ -2.12
snR56snR56 CMS1Q07897 291 aaKnown RBP1.81□□□□□ -2.12
snR56snR56 APC2Q12440 853 aa1.81□□□□□ -2.12
snR56snR56 RMD5Q12508 421 aa1.81□□□□□ -2.12
snR56snR56 RHO2P06781 192 aa1.8□□□□□ -2.12
snR56snR56 PRP21P32524 280 aaPredicted RBP1.8□□□□□ -2.12
snR56snR56 YER184CP39961 794 aa1.8□□□□□ -2.12
snR56snR56 ATG18P43601 500 aa1.8□□□□□ -2.12
snR56snR56 BCH1Q05029 724 aa1.8□□□□□ -2.12
snR56snR56 TY1B-AO13527 1196 aaKnown RBP1.79□□□□□ -2.12
snR56snR56 MRE11P32829 692 aa1.79□□□□□ -2.12
snR56snR56 MRS6P32864 603 aaKnown RBP1.79□□□□□ -2.12
snR56snR56 STP2P38704 541 aa1.79□□□□□ -2.12
snR56snR56 RPN14P53196 417 aa1.79□□□□□ -2.12
snR56snR56 YGR066CP53242 292 aa1.79□□□□□ -2.12
snR56snR56 KTR6P54070 446 aa1.79□□□□□ -2.12
snR56snR56 YMR102CQ03177 834 aa1.79□□□□□ -2.12
snR56snR56 SYF1Q04048 859 aaPredicted RBP1.79□□□□□ -2.12
snR56snR56 HUA2Q12134 243 aa1.79□□□□□ -2.12
snR56snR56 SBE22P38814 852 aa1.78□□□□□ -2.12
snR56snR56 WSS1P38838 269 aa1.78□□□□□ -2.12
snR56snR56 YIF1P53845 314 aaKnown RBP1.78□□□□□ -2.12
snR56snR56 YDR061WQ12298 539 aa1.78□□□□□ -2.12
snR56snR56 FOL3Q12676 427 aaPredicted RBP1.78□□□□□ -2.12
snR56snR56 ECT1P33412 323 aa1.77□□□□□ -2.13
snR56snR56 YIL029CP40538 142 aa1.77□□□□□ -2.13
snR56snR56 PET130P47065 347 aa1.77□□□□□ -2.13
snR56snR56 CPR7P47103 393 aa1.77□□□□□ -2.13
snR56snR56 RMD9P53140 646 aaKnown RBP1.77□□□□□ -2.13
snR56snR56 BET5Q03630 159 aa1.77□□□□□ -2.13
snR56snR56 YGK3Q12222 375 aaPredicted RBP1.77□□□□□ -2.13
snR56snR56 SEC39Q12745 709 aa1.77□□□□□ -2.13
snR56snR56 YLR278CQ05854 1341 aa1.76□□□□□ -2.13
snR56snR56 CDC16P09798 840 aa1.76□□□□□ -2.13
snR56snR56 NIP100P33420 868 aa1.76□□□□□ -2.13
snR56snR56 SPO73P40031 143 aa1.76□□□□□ -2.13
snR56snR56 EGT2P42835 1041 aa1.76□□□□□ -2.13
snR56snR56 SNU66Q12420 587 aaPredicted RBP1.76□□□□□ -2.13
snR56snR56 AFG1P32317 509 aa1.75□□□□□ -2.13
snR56snR56 AGA2P32781 87 aa1.75□□□□□ -2.13
snR56snR56 ANR2P36090 516 aaPredicted RBP1.75□□□□□ -2.13
snR56snR56 PTI1P39927 425 aaPredicted RBP1.75□□□□□ -2.13
snR56snR56 MST27P53176 234 aa1.75□□□□□ -2.13
snR56snR56 HRT1Q08273 121 aa1.75□□□□□ -2.13
snR56snR56 SKI7Q08491 747 aaPredicted RBP1.75□□□□□ -2.13
snR56snR56 ILV5P06168 395 aaKnown RBP1.74□□□□□ -2.13
snR56snR56 SPB1P25582 841 aaPredicted RBP1.74□□□□□ -2.13
snR56snR56 RAD14P28519 371 aa1.74□□□□□ -2.13
snR56snR56 SAS2P40963 338 aa1.74□□□□□ -2.13
snR56snR56 HMS2P47175 358 aa1.74□□□□□ -2.13
snR56snR56 YGR149WP48236 432 aa1.74□□□□□ -2.13
snR56snR56 HOT1Q03213 719 aa1.74□□□□□ -2.13
snR56snR56 RTN1Q04947 295 aaKnown RBP1.74□□□□□ -2.13
snR56snR56 IDH2P28241 369 aaKnown RBP1.73□□□□□ -2.13
snR56snR56 PCF11P39081 626 aaPredicted RBP1.73□□□□□ -2.13
snR56snR56 YPS6P40583 537 aa1.73□□□□□ -2.13
snR56snR56 VMA13P41807 478 aaKnown RBP1.73□□□□□ -2.13
snR56snR56 SFH5P47008 294 aa1.73□□□□□ -2.13
snR56snR56 TPI1P00942 248 aaKnown RBP1.72□□□□□ -2.13
snR56snR56 DFR1P07807 211 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
snR56snR56 ZRC1P20107 442 aa1.72□□□□□ -2.13
snR56snR56 YHR054CP38780 354 aa1.72□□□□□ -2.13
snR56snR56 CHL4P38907 458 aa1.72□□□□□ -2.13
snR56snR56 FRT2P39734 528 aa1.72□□□□□ -2.13
snR56snR56 YML131WQ03102 365 aa1.72□□□□□ -2.13
snR56snR56 PUT4P15380 627 aa1.71□□□□□ -2.14
snR56snR56 MRM2P53123 320 aa1.71□□□□□ -2.14
snR56snR56 YGR067CP53243 804 aa1.71□□□□□ -2.14
snR56snR56 SEC53P07283 254 aaKnown RBP1.7□□□□□ -2.14
snR56snR56 SEC63P14906 663 aa1.7□□□□□ -2.14
snR56snR56 SPO12P17123 173 aa1.7□□□□□ -2.14
snR56snR56 CTR86P25355 563 aa1.7□□□□□ -2.14
snR56snR56 PHA2P32452 334 aa1.7□□□□□ -2.14
snR56snR56 IGD1P43598 195 aa1.7□□□□□ -2.14
snR56snR56 REX4Q08237 289 aa1.7□□□□□ -2.14
snR56snR56 ESL1P40456 1118 aa1.69□□□□□ -2.14
snR56snR56 MFG1Q07684 458 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms