RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 DBF20P32328 564 aa0.3□□□□□ -2.36
snR48snR48 ECM25P32525 599 aa0.3□□□□□ -2.36
snR48snR48 CYM1P32898 989 aa0.3□□□□□ -2.36
snR48snR48 PPQ1P32945 549 aa0.3□□□□□ -2.36
snR48snR48 ECT1P33412 323 aa0.3□□□□□ -2.36
snR48snR48 AST1P35183 429 aa0.3□□□□□ -2.36
snR48snR48 THI2P38141 450 aa0.3□□□□□ -2.36
snR48snR48 YBL029WP38201 376 aa0.3□□□□□ -2.36
snR48snR48 AXL2P38928 823 aa0.3□□□□□ -2.36
snR48snR48 LYS1P38998 373 aaRIP-Chip data0.3□□□□□ -2.36not detected
snR48snR48 ATG18P43601 500 aa0.3□□□□□ -2.36
snR48snR48 SIP4P46954 829 aa0.3□□□□□ -2.36
snR48snR48 VID30P53076 958 aa0.3□□□□□ -2.36
snR48snR48 YGR067CP53243 804 aa0.3□□□□□ -2.36
snR48snR48 RPL21AQ02753 160 aaKnown RBP0.3□□□□□ -2.36
snR48snR48 RTN1Q04947 295 aaKnown RBP0.3□□□□□ -2.36
snR48snR48 TIR4Q12218 487 aaPredicted RBP0.3□□□□□ -2.36
snR48snR48 RLM1Q12224 676 aa0.3□□□□□ -2.36
snR48snR48 RPL21BQ12672 160 aaKnown RBP0.3□□□□□ -2.36
snR48snR48 ATP4P05626 244 aa0.29□□□□□ -2.36
snR48snR48 SCH9P11792 824 aaKnown RBP0.29□□□□□ -2.36
snR48snR48 KAR3P17119 729 aa0.29□□□□□ -2.36
snR48snR48 ATP10P18496 279 aa0.29□□□□□ -2.36
snR48snR48 TCD2P36101 447 aaKnown RBP0.29□□□□□ -2.36
snR48snR48 PSY4P38193 441 aa0.29□□□□□ -2.36
snR48snR48 YMR147WP40218 223 aaKnown RBP0.29□□□□□ -2.36
snR48snR48 HAC1P41546 238 aa0.29□□□□□ -2.36
snR48snR48 YSA1Q01976 231 aa0.29□□□□□ -2.36
snR48snR48 BET5Q03630 159 aa0.29□□□□□ -2.36
snR48snR48 CMS1Q07897 291 aaKnown RBP0.29□□□□□ -2.36
snR48snR48 SBE22P38814 852 aa0.28□□□□□ -2.36
snR48snR48 KAP123P40069 1113 aaKnown RBP0.28□□□□□ -2.36
snR48snR48 YNL208WP40159 199 aaKnown RBP0.28□□□□□ -2.36
snR48snR48 PET130P47065 347 aa0.28□□□□□ -2.36
snR48snR48 YJR030CP47101 745 aa0.28□□□□□ -2.36
snR48snR48 IOC4Q04213 475 aa0.28□□□□□ -2.36
snR48snR48 FAR10Q06001 478 aa0.28□□□□□ -2.36
snR48snR48 YGK3Q12222 375 aaPredicted RBP0.28□□□□□ -2.36
snR48snR48 NAG1Q8TGN9 163 aa0.28□□□□□ -2.36
snR48snR48 HIS4P00815 799 aaKnown RBP0.27□□□□□ -2.37
snR48snR48 TPI1P00942 248 aaKnown RBP0.27□□□□□ -2.37
snR48snR48 RPL31BP0C2H9 113 aaKnown RBP0.27□□□□□ -2.37
snR48snR48 PHO84P25297 587 aaKnown RBP0.27□□□□□ -2.37
snR48snR48 RAD57P25301 460 aa0.27□□□□□ -2.37
snR48snR48 CBF5P33322 483 aaKnown RBP RIP-Chip data0.27□□□□□ -2.37not detected
snR48snR48 CHL4P38907 458 aa0.27□□□□□ -2.37
snR48snR48 CCT6P39079 546 aa0.27□□□□□ -2.37
snR48snR48 FHL1P39521 936 aa0.27□□□□□ -2.37
snR48snR48 HMS2P47175 358 aa0.27□□□□□ -2.37
snR48snR48 COQ5P49017 307 aa0.27□□□□□ -2.37
snR48snR48 MRM2P53123 320 aa0.27□□□□□ -2.37
snR48snR48 MST27P53176 234 aa0.27□□□□□ -2.37
snR48snR48 HST4P53688 370 aa0.27□□□□□ -2.37
snR48snR48 NRM1P53718 249 aa0.27□□□□□ -2.37
snR48snR48 BCH1Q05029 724 aa0.27□□□□□ -2.37
snR48snR48 SGT1Q08446 395 aa0.27□□□□□ -2.37
snR48snR48 CLN1P20437 546 aa0.26□□□□□ -2.37
snR48snR48 IDH2P28241 369 aaKnown RBP0.26□□□□□ -2.37
snR48snR48 COX13P32799 129 aa0.26□□□□□ -2.37
snR48snR48 COX14P39103 70 aa0.26□□□□□ -2.37
snR48snR48 SCC4P40090 624 aa0.26□□□□□ -2.37
snR48snR48 SGN1P40561 250 aaKnown RBP RIP-Chip data0.26□□□□□ -2.37not detected
snR48snR48 NBP1P52919 319 aaPredicted RBP0.26□□□□□ -2.37
snR48snR48 YGL108CP53139 140 aa0.26□□□□□ -2.37
snR48snR48 GTR1Q00582 310 aa0.26□□□□□ -2.37
snR48snR48 HSP31Q04432 237 aa0.26□□□□□ -2.37
snR48snR48 REX4Q08237 289 aa0.26□□□□□ -2.37
snR48snR48 ORT1Q12375 292 aa0.26□□□□□ -2.37
snR48snR48 RTP1Q12751 981 aa0.26□□□□□ -2.37
snR48snR48 YPT6Q99260 215 aa0.26□□□□□ -2.37
snR48snR48 GAL80P04387 435 aa0.25□□□□□ -2.37
snR48snR48 FUM1P08417 488 aaKnown RBP0.25□□□□□ -2.37
snR48snR48 AFG1P32317 509 aa0.25□□□□□ -2.37
snR48snR48 PEX22P39718 180 aa0.25□□□□□ -2.37
snR48snR48 MAM33P40513 266 aa0.25□□□□□ -2.37
snR48snR48 YIL059CP40520 121 aa0.25□□□□□ -2.37
snR48snR48 LCB3P47013 409 aa0.25□□□□□ -2.37
snR48snR48 AIM24P47127 394 aa0.25□□□□□ -2.37
snR48snR48 PHB2P50085 310 aa0.25□□□□□ -2.37
snR48snR48 KTR5P53966 522 aaPredicted RBP0.25□□□□□ -2.37
snR48snR48 RGM1Q00453 211 aa0.25□□□□□ -2.37
snR48snR48 FIN1Q03898 291 aa0.25□□□□□ -2.37
snR48snR48 YEH1Q07804 573 aa0.25□□□□□ -2.37
snR48snR48 YBR126W-AQ8TGU7 68 aa0.25□□□□□ -2.37
snR48snR48 YLR278CQ05854 1341 aa0.24□□□□□ -2.37
snR48snR48 CHS3P29465 1165 aa0.24□□□□□ -2.37
snR48snR48 ZIP1P31111 875 aa0.24□□□□□ -2.37
snR48snR48 DEP1P31385 405 aa0.24□□□□□ -2.37
snR48snR48 TFB1P32776 642 aa0.24□□□□□ -2.37
snR48snR48 GYP6P32806 458 aa0.24□□□□□ -2.37
snR48snR48 MUM2P38236 366 aa0.24□□□□□ -2.37
snR48snR48 ATG12P38316 186 aa0.24□□□□□ -2.37
snR48snR48 ESL1P40456 1118 aa0.24□□□□□ -2.37
snR48snR48 LYS14P40971 790 aa0.24□□□□□ -2.37
snR48snR48 SFH5P47008 294 aa0.24□□□□□ -2.37
snR48snR48 VEL1P53058 206 aa0.24□□□□□ -2.37
snR48snR48 RMD9P53140 646 aaKnown RBP0.24□□□□□ -2.37
snR48snR48 CLD1P53264 445 aa0.24□□□□□ -2.37
snR48snR48 ALF1P53904 254 aa0.24□□□□□ -2.37
snR48snR48 SKI8Q02793 397 aaPredicted RBP0.24□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms