RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	YLL067W-A	P0CY01	160 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	MNE1	P24720	663 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	YIM1	P28625	365 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	GSH1	P32477	678 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	VBA2	P38358	474 aa	Known RBP	3.2	□□□□□ -1.9
VPS30	YPL120W	YLF2	P38746	405 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	YHR210C	P38893	341 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	YER010C	P40011	234 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	CTF18	P49956	741 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	TIM10	P87108	93 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	BET4	Q00618	327 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	SNO4	Q04902	237 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	HSP33	Q08914	237 aa	Known RBP	3.2	□□□□□ -1.9
VPS30	YPL120W	YPL191C	Q08930	360 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	HSP32	Q08992	237 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	YCR061W	P25639	631 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	SWI3	P32591	825 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	MAL32	P38158	584 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	DHH1	P39517	506 aa	Known RBP	3.2	□□□□□ -1.9
VPS30	YPL120W	NOP16	P40007	231 aa	Known RBP	3.2	□□□□□ -1.9
VPS30	YPL120W	HOS2	P53096	452 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS30	YPL120W	SGF73	P53165	657 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	TRI1	Q05024	226 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	RTT103	Q05543	409 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	DON1	Q05610	365 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	PLB3	Q08108	686 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	PEX11	Q12462	236 aa		3.2	□□□□□ -1.9
VPS30	YPL120W	MET8	P15807	274 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	PDA1	P16387	420 aa	Known RBP	3.19	□□□□□ -1.9
VPS30	YPL120W	RRT12	P25381	491 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	RDS1	P25611	832 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	PRE2	P30656	287 aa	Known RBP	3.19	□□□□□ -1.9
VPS30	YPL120W	ARP2	P32381	391 aa	Known RBP	3.19	□□□□□ -1.9
VPS30	YPL120W	TEF4	P36008	412 aa	Known RBP	3.19	□□□□□ -1.9
VPS30	YPL120W	MRPL36	P36531	177 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	URA8	P38627	578 aa	Predicted RBP	3.19	□□□□□ -1.9
VPS30	YPL120W	CAB2	P40506	365 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	SSU1	P41930	458 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	RBG2	P53295	368 aa	Known RBP	3.19	□□□□□ -1.9
VPS30	YPL120W	RHO3	Q00245	231 aa	Known RBP	3.19	□□□□□ -1.9
VPS30	YPL120W	SPC19	Q03954	165 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	YLR281C	Q05863	155 aa		3.19	□□□□□ -1.9
VPS30	YPL120W	HSP82	P02829	709 aa	Known RBP	3.18	□□□□□ -1.9
VPS30	YPL120W	PTC6	P25646	442 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	SIP1	P32578	815 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	CNS1	P33313	385 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	SKN1	P33336	771 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	RPF2	P36160	344 aa	Known RBP	3.18	□□□□□ -1.9
VPS30	YPL120W	DTR1	P38125	572 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	RKM3	P38222	552 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	SPT8	P38915	602 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	RPA49	Q01080	415 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS30	YPL120W	YPR114W	Q06107	315 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	AKR2	Q12013	749 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	YMR230W-A	Q3E7B5	62 aa		3.18	□□□□□ -1.9
VPS30	YPL120W	COX1	P00401	534 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	FUM1	P08417	488 aa	Known RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	CLC1	P17891	233 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	YIH1	P25637	258 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	SRP72	P38688	640 aa	Known RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	NPR3	P38742	1146 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	RIC1	P40395	1056 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	YIL086C	P40503	102 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	MKT1	P40850	830 aa	Known RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	YFR018C	P43599	363 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	YGL108C	P53139	140 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	RTC4	P53850	401 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	YKU80	Q04437	629 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	TAF9	Q05027	157 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	RRP45	Q05636	305 aa	Known RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	RCN2	Q12044	265 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	HSH49	Q99181	213 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	ALG1	P16661	449 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	CMK1	P27466	446 aa	Known RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	BUD14	P27637	709 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	MRPL37	P36532	105 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	SDS24	P38314	527 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	LRP1	P38801	184 aa	Known RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	LYS1	P38998	373 aa	RIP-Chip data	3.17	□□□□□ -1.9	RIP-Chip
VPS30	YPL120W	YER130C	P39959	443 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	VFA1	P40080	203 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	MEP1	P40260	492 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	TRM9	P49957	279 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	MND1	P53102	219 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	SWC4	P53201	476 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	MRPL19	P53875	158 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	FMP42	Q04991	504 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	PDR8	Q06149	701 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	GPN2	Q08726	347 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS30	YPL120W	RSA1	Q08932	381 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	NBL1	Q3E7Y6	73 aa		3.17	□□□□□ -1.9
VPS30	YPL120W	FUR1	P18562	216 aa	Known RBP	3.16	□□□□□ -1.9
VPS30	YPL120W	ISY1	P21374	235 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS30	YPL120W	VPS1	P21576	704 aa	Known RBP	3.16	□□□□□ -1.9
VPS30	YPL120W	MRPL8	P22353	238 aa		3.16	□□□□□ -1.9
VPS30	YPL120W	MSP1	P28737	362 aa		3.16	□□□□□ -1.9
VPS30	YPL120W	NUP120	P35729	1037 aa		3.16	□□□□□ -1.9
VPS30	YPL120W	DED81	P38707	554 aa	Known RBP	3.16	□□□□□ -1.9
VPS30	YPL120W	MSR1	P38714	643 aa		3.16	□□□□□ -1.9
VPS30	YPL120W	YND1	P40009	630 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms