RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C TIP41Q12199 356 aa3.25□□□□□ -1.89
TOP1YOL006C TY1A-NL1Q12391 440 aaKnown RBP3.25□□□□□ -1.89
TOP1YOL006C RMD5Q12508 421 aa3.25□□□□□ -1.89
TOP1YOL006C ZPS1Q12512 249 aa3.25□□□□□ -1.89
TOP1YOL006C AI5_ALPHAQ9ZZX1 630 aa3.25□□□□□ -1.89
TOP1YOL006C GAL4P04386 881 aa3.24□□□□□ -1.89
TOP1YOL006C RAD7P06779 565 aa3.24□□□□□ -1.89
TOP1YOL006C RHO1P06780 209 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C RIP1P08067 215 aa3.24□□□□□ -1.89
TOP1YOL006C MET3P08536 511 aa3.24□□□□□ -1.89
TOP1YOL006C MATALPHA2P0CY08 210 aa3.24□□□□□ -1.89
TOP1YOL006C HMLALPHA2P0CY09 210 aa3.24□□□□□ -1.89
TOP1YOL006C GPI12P23797 304 aa3.24□□□□□ -1.89
TOP1YOL006C DPB2P24482 689 aaPredicted RBP3.24□□□□□ -1.89
TOP1YOL006C NRP1P32770 719 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
TOP1YOL006C YSC83P32792 385 aa3.24□□□□□ -1.89
TOP1YOL006C RPC34P32910 317 aa3.24□□□□□ -1.89
TOP1YOL006C UBC6P33296 250 aaPredicted RBP3.24□□□□□ -1.89
TOP1YOL006C SOF1P33750 489 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C VPS51P36116 164 aa3.24□□□□□ -1.89
TOP1YOL006C MRPL7P36519 292 aa3.24□□□□□ -1.89
TOP1YOL006C QDR3P38227 689 aa3.24□□□□□ -1.89
TOP1YOL006C MMS21P38632 267 aa3.24□□□□□ -1.89
TOP1YOL006C OPT1P40897 799 aa3.24□□□□□ -1.89
TOP1YOL006C NPA3P47122 385 aa3.24□□□□□ -1.89
TOP1YOL006C AMA1P50082 593 aa3.24□□□□□ -1.89
TOP1YOL006C ATG26Q06321 1198 aa3.24□□□□□ -1.89
TOP1YOL006C PKH2Q12236 1081 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C PRP46Q12417 451 aaPredicted RBP3.24□□□□□ -1.89
TOP1YOL006C RHO2P06781 192 aa3.24□□□□□ -1.89
TOP1YOL006C CDC33P07260 213 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C RPL18AP0CX49 186 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C RPL18BP0CX50 186 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C RPL24BP24000 155 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C RHB1P25378 209 aa3.24□□□□□ -1.89
TOP1YOL006C CSM1P25651 190 aa3.24□□□□□ -1.89
TOP1YOL006C GAC1P28006 793 aa3.24□□□□□ -1.89
TOP1YOL006C GAR1P28007 205 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C DEG1P31115 442 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C REC114P32841 428 aa3.24□□□□□ -1.89
TOP1YOL006C TRM2P33753 639 aa3.24□□□□□ -1.89
TOP1YOL006C HES1P35843 434 aa3.24□□□□□ -1.89
TOP1YOL006C YHR177WP38867 453 aa3.24□□□□□ -1.89
TOP1YOL006C FET3P38993 636 aa3.24□□□□□ -1.89
TOP1YOL006C CIN4P39110 191 aa3.24□□□□□ -1.89
TOP1YOL006C ECM10P39987 644 aa3.24□□□□□ -1.89
TOP1YOL006C PAC11P40960 533 aa3.24□□□□□ -1.89
TOP1YOL006C YFL066CP43538 392 aa3.24□□□□□ -1.89
TOP1YOL006C SCD6P45978 349 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89 RIP-Chip
TOP1YOL006C KAP114P53067 1004 aa3.24□□□□□ -1.89
TOP1YOL006C NNT1Q05874 261 aa3.24□□□□□ -1.89
TOP1YOL006C MDM30Q05930 598 aa3.24□□□□□ -1.89
TOP1YOL006C OPT2Q06593 877 aa3.24□□□□□ -1.89
TOP1YOL006C TEN1Q07921 160 aa3.24□□□□□ -1.89
TOP1YOL006C AFT2Q08957 416 aa3.24□□□□□ -1.89
TOP1YOL006C LSP1Q12230 341 aaKnown RBP3.24□□□□□ -1.89
TOP1YOL006C UBA3Q99344 299 aa3.24□□□□□ -1.89
TOP1YOL006C SCEIP03882 235 aa3.23□□□□□ -1.89
TOP1YOL006C ADE4P04046 510 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C GDH1P07262 454 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C RPL27AP0C2H6 136 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C RPL27BP0C2H7 136 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C RPS16AP0CX51 143 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C RPS16BP0CX52 143 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C RPL35AP0CX84 120 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C RPL35BP0CX85 120 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C PCT1P13259 424 aa3.23□□□□□ -1.89
TOP1YOL006C RPS5P26783 225 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C ADE1P27616 306 aa3.23□□□□□ -1.89
TOP1YOL006C SIN4P32259 974 aa3.23□□□□□ -1.89
TOP1YOL006C MSS51P32335 436 aa3.23□□□□□ -1.89
TOP1YOL006C MSS1P32559 526 aaPredicted RBP3.23□□□□□ -1.89
TOP1YOL006C LHS1P36016 881 aa3.23□□□□□ -1.89
TOP1YOL006C COS9P36034 407 aa3.23□□□□□ -1.89
TOP1YOL006C DOA1P36037 715 aa3.23□□□□□ -1.89
TOP1YOL006C GMH1P36125 273 aa3.23□□□□□ -1.89
TOP1YOL006C LDB7P38210 180 aa3.23□□□□□ -1.89
TOP1YOL006C RPP1P38786 293 aa3.23□□□□□ -1.89
TOP1YOL006C PFS1P38872 237 aa3.23□□□□□ -1.89
TOP1YOL006C SEC72P39742 193 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C YEL020CP39994 560 aa3.23□□□□□ -1.89
TOP1YOL006C PIG2P40187 538 aa3.23□□□□□ -1.89
TOP1YOL006C SNL1P40548 159 aa3.23□□□□□ -1.89
TOP1YOL006C YIL001WP40560 513 aa3.23□□□□□ -1.89
TOP1YOL006C RPN11P43588 306 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C YFR020WP43600 232 aa3.23□□□□□ -1.89
TOP1YOL006C BNA3P47039 444 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C MRPL50P53724 139 aa3.23□□□□□ -1.89
TOP1YOL006C ADE16P54113 591 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C MRP51Q02950 344 aa3.23□□□□□ -1.89
TOP1YOL006C MSC1Q03104 513 aa3.23□□□□□ -1.89
TOP1YOL006C YDR109CQ04585 715 aa3.23□□□□□ -1.89
TOP1YOL006C RGC1Q06108 1083 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C NSE1Q07913 336 aa3.23□□□□□ -1.89
TOP1YOL006C YDL176WQ12027 708 aa3.23□□□□□ -1.89
TOP1YOL006C YRA1Q12159 226 aaKnown RBP3.23□□□□□ -1.89
TOP1YOL006C RAV1P47104 1357 aa3.23□□□□□ -1.89
TOP1YOL006C TEF1P02994 458 aaKnown RBP3.22□□□□□ -1.89
TOP1YOL006C COR1P07256 457 aa3.22□□□□□ -1.89
TOP1YOL006C YLL053CP0CD98 152 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms