RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ADE17P38009 592 aaKnown RBP6.78□□□□□ -1.32
HDA1YNL021W GPI16P38875 610 aa6.78□□□□□ -1.32
HDA1YNL021W BIO3P50277 480 aa6.78□□□□□ -1.32
HDA1YNL021W DRN1P53255 507 aaKnown RBP6.78□□□□□ -1.32
HDA1YNL021W YGR151CP53287 111 aa6.78□□□□□ -1.32
HDA1YNL021W SNZ1Q03148 297 aa6.78□□□□□ -1.32
HDA1YNL021W RXT3Q07458 294 aa6.78□□□□□ -1.32
HDA1YNL021W GAL3P13045 520 aa6.77□□□□□ -1.33
HDA1YNL021W PET18P25362 215 aa6.77□□□□□ -1.33
HDA1YNL021W RIM1P32445 135 aaKnown RBP6.77□□□□□ -1.33
HDA1YNL021W ARA1P38115 344 aa6.77□□□□□ -1.33
HDA1YNL021W YGR127WP53275 312 aa6.77□□□□□ -1.33
HDA1YNL021W MNT4P53745 580 aa6.77□□□□□ -1.33
HDA1YNL021W HCR1Q05775 265 aaKnown RBP6.77□□□□□ -1.33
HDA1YNL021W POS5Q06892 414 aa6.77□□□□□ -1.33
HDA1YNL021W ARG80P07249 177 aa6.77□□□□□ -1.33
HDA1YNL021W CNA1P23287 553 aa6.77□□□□□ -1.33
HDA1YNL021W BOS1P25385 244 aa6.77□□□□□ -1.33
HDA1YNL021W DPH5P32469 300 aaPredicted RBP6.77□□□□□ -1.33
HDA1YNL021W VBA2P38358 474 aaKnown RBP6.77□□□□□ -1.33
HDA1YNL021W MBB1P39534 108 aa6.77□□□□□ -1.33
HDA1YNL021W RIB4P50861 169 aaPredicted RBP6.77□□□□□ -1.33
HDA1YNL021W PNG1Q02890 363 aa6.77□□□□□ -1.33
HDA1YNL021W SPO19Q03029 223 aa6.77□□□□□ -1.33
HDA1YNL021W YOR352WQ08816 343 aa6.77□□□□□ -1.33
HDA1YNL021W MDM20Q12387 796 aaKnown RBP6.77□□□□□ -1.33
HDA1YNL021W CKA2P19454 339 aa6.76□□□□□ -1.33
HDA1YNL021W COT1P32798 439 aa6.76□□□□□ -1.33
HDA1YNL021W MSN4P33749 630 aa6.76□□□□□ -1.33
HDA1YNL021W DSL1P53847 754 aa6.76□□□□□ -1.33
HDA1YNL021W GFD1Q04839 188 aaKnown RBP6.76□□□□□ -1.33
HDA1YNL021W BOP2Q06150 570 aa6.76□□□□□ -1.33
HDA1YNL021W PKH2Q12236 1081 aaKnown RBP6.76□□□□□ -1.33
HDA1YNL021W RBD2Q12270 262 aa6.76□□□□□ -1.33
HDA1YNL021W ZPS1Q12512 249 aa6.76□□□□□ -1.33
HDA1YNL021W PRB1P09232 635 aa6.76□□□□□ -1.33
HDA1YNL021W SPS4P09937 338 aa6.76□□□□□ -1.33
HDA1YNL021W YCL068CP25593 260 aa6.76□□□□□ -1.33
HDA1YNL021W RAD14P28519 371 aa6.76□□□□□ -1.33
HDA1YNL021W SAP1P39955 897 aaKnown RBP6.76□□□□□ -1.33
HDA1YNL021W ULP2P40537 1034 aaPredicted RBP6.76□□□□□ -1.33
HDA1YNL021W ROG1P53118 685 aa6.76□□□□□ -1.33
HDA1YNL021W DBP6P53734 629 aaKnown RBP6.76□□□□□ -1.33
HDA1YNL021W YMR187CQ03236 431 aa6.76□□□□□ -1.33
HDA1YNL021W DLT1Q04216 342 aa6.76□□□□□ -1.33
HDA1YNL021W HRD3Q05787 833 aa6.76□□□□□ -1.33
HDA1YNL021W GGA1Q06336 557 aa6.76□□□□□ -1.33
HDA1YNL021W SUE1Q06524 206 aa6.76□□□□□ -1.33
HDA1YNL021W YLL007CQ07799 665 aa6.76□□□□□ -1.33
HDA1YNL021W AFT2Q08957 416 aa6.76□□□□□ -1.33
HDA1YNL021W COR1P07256 457 aa6.75□□□□□ -1.33
HDA1YNL021W SGV1P23293 657 aaKnown RBP6.75□□□□□ -1.33
HDA1YNL021W SIN4P32259 974 aa6.75□□□□□ -1.33
HDA1YNL021W EFB1P32471 206 aaKnown RBP6.75□□□□□ -1.33
HDA1YNL021W LHS1P36016 881 aa6.75□□□□□ -1.33
HDA1YNL021W RTT102P53330 157 aa6.75□□□□□ -1.33
HDA1YNL021W INP2Q03824 705 aa6.75□□□□□ -1.33
HDA1YNL021W MDM36Q06820 579 aa6.75□□□□□ -1.33
HDA1YNL021W ENB1Q08299 606 aa6.75□□□□□ -1.33
HDA1YNL021W MCA1Q08601 432 aa6.75□□□□□ -1.33
HDA1YNL021W CYC7P00045 113 aa6.74□□□□□ -1.33
HDA1YNL021W PEP4P07267 405 aaKnown RBP6.74□□□□□ -1.33
HDA1YNL021W UGA1P17649 471 aa6.74□□□□□ -1.33
HDA1YNL021W GAC1P28006 793 aa6.74□□□□□ -1.33
HDA1YNL021W PMI40P29952 429 aaKnown RBP6.74□□□□□ -1.33
HDA1YNL021W RPL32P38061 130 aaKnown RBP6.74□□□□□ -1.33
HDA1YNL021W ANS1P38832 159 aa6.74□□□□□ -1.33
HDA1YNL021W RIX1P38883 763 aaPredicted RBP6.74□□□□□ -1.33
HDA1YNL021W STN1P38960 494 aa6.74□□□□□ -1.33
HDA1YNL021W GCN20P43535 752 aaKnown RBP6.74□□□□□ -1.33
HDA1YNL021W MPP6P53725 186 aaPredicted RBP6.74□□□□□ -1.33
HDA1YNL021W SNO2P53823 222 aa6.74□□□□□ -1.33
HDA1YNL021W TRS23Q03784 219 aa6.74□□□□□ -1.33
HDA1YNL021W ERV41Q04651 352 aa6.74□□□□□ -1.33
HDA1YNL021W CSR2Q12734 1121 aa6.74□□□□□ -1.33
HDA1YNL021W PMR1P13586 950 aa6.74□□□□□ -1.33
HDA1YNL021W BEM1P29366 551 aa6.74□□□□□ -1.33
HDA1YNL021W ICS2P38284 255 aa6.74□□□□□ -1.33
HDA1YNL021W YHR177WP38867 453 aa6.74□□□□□ -1.33
HDA1YNL021W GTO1P48239 356 aa6.74□□□□□ -1.33
HDA1YNL021W IPK1Q06667 281 aa6.74□□□□□ -1.33
HDA1YNL021W VAC14Q06708 880 aa6.74□□□□□ -1.33
HDA1YNL021W TLG2Q08144 397 aa6.74□□□□□ -1.33
HDA1YNL021W APC2Q12440 853 aa6.74□□□□□ -1.33
HDA1YNL021W STE2D6VTK4 431 aa6.73□□□□□ -1.33
HDA1YNL021W MEK1P24719 497 aaPredicted RBP6.73□□□□□ -1.33
HDA1YNL021W MGR1P25573 417 aa6.73□□□□□ -1.33
HDA1YNL021W MTR2P34232 184 aaKnown RBP6.73□□□□□ -1.33
HDA1YNL021W LST4P34239 828 aa6.73□□□□□ -1.33
HDA1YNL021W GAA1P39012 614 aa6.73□□□□□ -1.33
HDA1YNL021W FMP52P40008 231 aa6.73□□□□□ -1.33
HDA1YNL021W PTR3P43606 678 aa6.73□□□□□ -1.33
HDA1YNL021W TAX4P47030 604 aa6.73□□□□□ -1.33
HDA1YNL021W MND1P53102 219 aa6.73□□□□□ -1.33
HDA1YNL021W TIM21P53220 239 aa6.73□□□□□ -1.33
HDA1YNL021W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
HDA1YNL021W GPH1P06738 902 aaKnown RBP6.73□□□□□ -1.33
HDA1YNL021W KDX1P36005 433 aa6.73□□□□□ -1.33
HDA1YNL021W SUL1P38359 859 aa6.73□□□□□ -1.33
HDA1YNL021W MNL1P38888 796 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms