RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YLF2P38746 405 aa3.68□□□□□ -1.82
ECM16YMR128W FHL1P39521 936 aa3.68□□□□□ -1.82
ECM16YMR128W SOK1P40317 901 aa3.68□□□□□ -1.82
ECM16YMR128W SEC28P40509 296 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W CAF16P43569 289 aa3.68□□□□□ -1.82
ECM16YMR128W HAM1P47119 197 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W HOS2P53096 452 aaPredicted RBP3.68□□□□□ -1.82
ECM16YMR128W MUK1Q02866 612 aa3.68□□□□□ -1.82
ECM16YMR128W RPN9Q04062 393 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W MUS81Q04149 632 aaPredicted RBP3.68□□□□□ -1.82
ECM16YMR128W YLR413WQ06689 675 aa3.68□□□□□ -1.82
ECM16YMR128W NBA1Q08229 501 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W YOL131WQ08270 108 aa3.68□□□□□ -1.82
ECM16YMR128W PST2Q12335 198 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W RPS21AP0C0V8 87 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W GIT1P25346 518 aa3.68□□□□□ -1.82
ECM16YMR128W RNP1P32385 249 aa3.68□□□□□ -1.82
ECM16YMR128W MRPL6P32904 214 aa3.68□□□□□ -1.82
ECM16YMR128W CAF4P36130 643 aa3.68□□□□□ -1.82
ECM16YMR128W APD1P38281 316 aa3.68□□□□□ -1.82
ECM16YMR128W MEP2P41948 499 aa3.68□□□□□ -1.82
ECM16YMR128W AIM23P47015 356 aa3.68□□□□□ -1.82
ECM16YMR128W EFM5P53200 248 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W PEX31P53203 462 aa3.68□□□□□ -1.82
ECM16YMR128W LEE1Q02799 301 aaKnown RBP3.68□□□□□ -1.82
ECM16YMR128W YLR345WQ06137 509 aa3.68□□□□□ -1.82
ECM16YMR128W MCP2Q06567 569 aa3.68□□□□□ -1.82
ECM16YMR128W TRM10Q12400 293 aa3.68□□□□□ -1.82
ECM16YMR128W ARP7Q12406 477 aa3.68□□□□□ -1.82
ECM16YMR128W RPC40P07703 335 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W MRPL9P31334 269 aa3.67□□□□□ -1.82
ECM16YMR128W TOD6P34219 525 aa3.67□□□□□ -1.82
ECM16YMR128W YKL107WP34251 309 aa3.67□□□□□ -1.82
ECM16YMR128W IPI1P38803 334 aaPredicted RBP3.67□□□□□ -1.82
ECM16YMR128W YAR028WP39548 234 aa3.67□□□□□ -1.82
ECM16YMR128W CAK1P43568 368 aaPredicted RBP3.67□□□□□ -1.82
ECM16YMR128W HMS2P47175 358 aa3.67□□□□□ -1.82
ECM16YMR128W SAP4P53036 818 aa3.67□□□□□ -1.82
ECM16YMR128W MRH4P53166 561 aa3.67□□□□□ -1.82
ECM16YMR128W DBP6P53734 629 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W NUP49Q02199 472 aa3.67□□□□□ -1.82
ECM16YMR128W RLI1Q03195 608 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W YDR124WQ04608 324 aa3.67□□□□□ -1.82
ECM16YMR128W ICT1Q12385 394 aa3.67□□□□□ -1.82
ECM16YMR128W YOR131CQ12486 218 aa3.67□□□□□ -1.82
ECM16YMR128W MHF1Q3E835 90 aa3.67□□□□□ -1.82
ECM16YMR128W ARE1P25628 610 aa3.67□□□□□ -1.82
ECM16YMR128W MSN2P33748 704 aa3.67□□□□□ -1.82
ECM16YMR128W DHH1P39517 506 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W PRM9P39551 298 aa3.67□□□□□ -1.82
ECM16YMR128W PCL6P40038 420 aa3.67□□□□□ -1.82
ECM16YMR128W UPF3P48412 387 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W PRM8P53174 237 aa3.67□□□□□ -1.82
ECM16YMR128W GRS2Q06817 618 aa3.67□□□□□ -1.82
ECM16YMR128W PGC1Q08959 321 aa3.67□□□□□ -1.82
ECM16YMR128W RPN6Q12377 434 aa3.67□□□□□ -1.82
ECM16YMR128W GPH1P06738 902 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W ATG22P25568 528 aa3.67□□□□□ -1.82
ECM16YMR128W SPT14P32363 452 aa3.67□□□□□ -1.82
ECM16YMR128W GLG1P36143 616 aa3.67□□□□□ -1.82
ECM16YMR128W POL12P38121 705 aaPredicted RBP3.67□□□□□ -1.82
ECM16YMR128W GND1P38720 489 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W HAT2P39984 401 aa3.67□□□□□ -1.82
ECM16YMR128W SER33P40510 469 aa3.67□□□□□ -1.82
ECM16YMR128W COP1P53622 1201 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W YNR068CP53754 272 aa3.67□□□□□ -1.82
ECM16YMR128W COX20Q04935 205 aa3.67□□□□□ -1.82
ECM16YMR128W YLR257WQ06146 321 aaKnown RBP3.67□□□□□ -1.82
ECM16YMR128W BAG7Q12128 409 aa3.67□□□□□ -1.82
ECM16YMR128W MHF2Q3E829 80 aa3.67□□□□□ -1.82
ECM16YMR128W YBR182C-AQ8TGU6 64 aa3.67□□□□□ -1.82
ECM16YMR128W URA3P03962 267 aa3.66□□□□□ -1.82
ECM16YMR128W HEM2P05373 342 aa3.66□□□□□ -1.82
ECM16YMR128W RPS4AP0CX35 261 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W RPS4BP0CX36 261 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W DAP2P18962 818 aa3.66□□□□□ -1.82
ECM16YMR128W KGD2P19262 463 aaPredicted RBP3.66□□□□□ -1.82
ECM16YMR128W YCL002CP25565 263 aa3.66□□□□□ -1.82
ECM16YMR128W YCL049CP25577 312 aa3.66□□□□□ -1.82
ECM16YMR128W YCR016WP25617 290 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W RIB1P38066 345 aa3.66□□□□□ -1.82
ECM16YMR128W VMA7P39111 118 aa3.66□□□□□ -1.82
ECM16YMR128W SER2P42941 309 aa3.66□□□□□ -1.82
ECM16YMR128W GCV2P49095 1034 aa3.66□□□□□ -1.82
ECM16YMR128W TRM112P53738 135 aaPredicted RBP3.66□□□□□ -1.82
ECM16YMR128W PPN1Q04119 674 aa3.66□□□□□ -1.82
ECM16YMR128W RAX1Q08760 435 aa3.66□□□□□ -1.82
ECM16YMR128W RIB3Q99258 208 aa3.66□□□□□ -1.82
ECM16YMR128W SAR1P20606 190 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W OCA4P25366 362 aa3.66□□□□□ -1.82
ECM16YMR128W YPT7P32939 208 aa3.66□□□□□ -1.82
ECM16YMR128W MCM7P38132 845 aa3.66□□□□□ -1.82
ECM16YMR128W TPA1P40032 644 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W ARO8P53090 500 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W PNG1Q02890 363 aa3.66□□□□□ -1.82
ECM16YMR128W HIS1P00498 297 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W RAS2P01120 322 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W RPL6BP05739 176 aaKnown RBP3.66□□□□□ -1.82
ECM16YMR128W ALG7P07286 448 aa3.66□□□□□ -1.82
ECM16YMR128W MET2P08465 486 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 122.9 ms