RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C CSF1Q12150 2958 aa9.9□□□□□ -0.82
SHM2YLR058C CTS1P29029 562 aa9.9□□□□□ -0.83
SHM2YLR058C NUP2P32499 720 aa9.9□□□□□ -0.83
SHM2YLR058C SRB5P32585 307 aa9.9□□□□□ -0.83
SHM2YLR058C SUI1P32911 108 aaKnown RBP9.9□□□□□ -0.83
SHM2YLR058C OMA1P36163 345 aa9.9□□□□□ -0.83
SHM2YLR058C MED8P38304 223 aa9.9□□□□□ -0.83
SHM2YLR058C RCK1P38622 512 aa9.9□□□□□ -0.83
SHM2YLR058C RPL10P41805 221 aaKnown RBP9.9□□□□□ -0.83
SHM2YLR058C YLR456WQ06199 204 aa9.9□□□□□ -0.83
SHM2YLR058C HFA1P32874 2273 aa9.89□□□□□ -0.83
SHM2YLR058C YAK1P14680 807 aa9.89□□□□□ -0.83
SHM2YLR058C MNN9P39107 395 aaKnown RBP9.89□□□□□ -0.83
SHM2YLR058C DLD3P39976 496 aaKnown RBP9.89□□□□□ -0.83
SHM2YLR058C LAS21P40367 830 aa9.89□□□□□ -0.83
SHM2YLR058C FMP33P46998 180 aa9.89□□□□□ -0.83
SHM2YLR058C NRM1P53718 249 aa9.89□□□□□ -0.83
SHM2YLR058C SED5Q01590 340 aa9.89□□□□□ -0.83
SHM2YLR058C UGO1Q03327 502 aa9.89□□□□□ -0.83
SHM2YLR058C DIC1Q06143 298 aa9.89□□□□□ -0.83
SHM2YLR058C YLR030WQ07967 263 aa9.89□□□□□ -0.83
SHM2YLR058C SLH1P53327 1967 aaKnown RBP9.88□□□□□ -0.83
SHM2YLR058C COR1P07256 457 aa9.88□□□□□ -0.83
SHM2YLR058C VPS33P20795 691 aa9.88□□□□□ -0.83
SHM2YLR058C SSH4P32343 579 aa9.88□□□□□ -0.83
SHM2YLR058C NTH1P32356 751 aa9.88□□□□□ -0.83
SHM2YLR058C UGP1P32861 499 aaKnown RBP9.88□□□□□ -0.83
SHM2YLR058C OAR1P35731 278 aa9.88□□□□□ -0.83
SHM2YLR058C ARF3P40994 183 aaRIP-Chip data9.88□□□□□ -0.83not detected
SHM2YLR058C DUG1P43616 481 aaKnown RBP9.88□□□□□ -0.83
SHM2YLR058C IBA57P47158 497 aa9.88□□□□□ -0.83
SHM2YLR058C ARR1Q06596 294 aa9.88□□□□□ -0.83
SHM2YLR058C YLR036CQ07986 203 aa9.88□□□□□ -0.83
SHM2YLR058C CBS2P14905 389 aa9.87□□□□□ -0.83
SHM2YLR058C NPR1P22211 790 aa9.87□□□□□ -0.83
SHM2YLR058C CMK2P22517 447 aa9.87□□□□□ -0.83
SHM2YLR058C SPB1P25582 841 aaPredicted RBP9.87□□□□□ -0.83
SHM2YLR058C PEX3P28795 441 aa9.87□□□□□ -0.83
SHM2YLR058C AST1P35183 429 aa9.87□□□□□ -0.83
SHM2YLR058C SCO2P38072 301 aa9.87□□□□□ -0.83
SHM2YLR058C ALK1P43633 760 aaKnown RBP9.87□□□□□ -0.83
SHM2YLR058C DSL1P53847 754 aa9.87□□□□□ -0.83
SHM2YLR058C CSL4P53859 292 aaPredicted RBP9.87□□□□□ -0.83
SHM2YLR058C YNL095CP53932 642 aa9.87□□□□□ -0.83
SHM2YLR058C PEX12Q04370 399 aa9.87□□□□□ -0.83
SHM2YLR058C YKU80Q04437 629 aa9.87□□□□□ -0.83
SHM2YLR058C RQC1Q05468 723 aaKnown RBP9.87□□□□□ -0.83
SHM2YLR058C GPI11Q06636 219 aa9.87□□□□□ -0.83
SHM2YLR058C TEN1Q07921 160 aa9.87□□□□□ -0.83
SHM2YLR058C BSC6Q08280 497 aa9.87□□□□□ -0.83
SHM2YLR058C GLO4Q12320 285 aa9.87□□□□□ -0.83
SHM2YLR058C HTA1P04911 132 aaKnown RBP9.86□□□□□ -0.83
SHM2YLR058C RAD7P06779 565 aa9.86□□□□□ -0.83
SHM2YLR058C RPP1BP10622 106 aaKnown RBP9.86□□□□□ -0.83
SHM2YLR058C CHA1P25379 360 aaKnown RBP9.86□□□□□ -0.83
SHM2YLR058C YCL049CP25577 312 aa9.86□□□□□ -0.83
SHM2YLR058C IMG1P25626 169 aa9.86□□□□□ -0.83
SHM2YLR058C TAH1P25638 111 aaPredicted RBP9.86□□□□□ -0.83
SHM2YLR058C DOA1P36037 715 aa9.86□□□□□ -0.83
SHM2YLR058C YBR241CP38142 488 aa9.86□□□□□ -0.83
SHM2YLR058C AIM2P39721 246 aa9.86□□□□□ -0.83
SHM2YLR058C RSP5P39940 809 aaKnown RBP9.86□□□□□ -0.83
SHM2YLR058C PTC2P39966 464 aaKnown RBP9.86□□□□□ -0.83
SHM2YLR058C RIC1P40395 1056 aa9.86□□□□□ -0.83
SHM2YLR058C HOC1P47124 396 aa9.86□□□□□ -0.83
SHM2YLR058C GIC2Q06648 383 aa9.86□□□□□ -0.83
SHM2YLR058C GAL3P13045 520 aa9.85□□□□□ -0.83
SHM2YLR058C MSB1P21339 1137 aaKnown RBP9.85□□□□□ -0.83
SHM2YLR058C SLY41P22215 453 aa9.85□□□□□ -0.83
SHM2YLR058C YCR006CP25350 157 aa9.85□□□□□ -0.83
SHM2YLR058C YRO2P38079 344 aa9.85□□□□□ -0.83
SHM2YLR058C YNR068CP53754 272 aa9.85□□□□□ -0.83
SHM2YLR058C ISR1Q06098 443 aaKnown RBP9.85□□□□□ -0.83
SHM2YLR058C WTM1Q12363 437 aaKnown RBP9.85□□□□□ -0.83
SHM2YLR058C PFK27Q12471 397 aaPredicted RBP9.85□□□□□ -0.83
SHM2YLR058C YMC1P32331 307 aa9.84□□□□□ -0.83
SHM2YLR058C ARP2P32381 391 aaKnown RBP9.84□□□□□ -0.83
SHM2YLR058C CDC12P32468 407 aaKnown RBP9.84□□□□□ -0.83
SHM2YLR058C YBR238CP38330 731 aaKnown RBP9.84□□□□□ -0.83
SHM2YLR058C YHR177WP38867 453 aa9.84□□□□□ -0.83
SHM2YLR058C YEL020CP39994 560 aa9.84□□□□□ -0.83
SHM2YLR058C LYS12P40495 371 aaKnown RBP9.84□□□□□ -0.83
SHM2YLR058C PAC10P48363 199 aa9.84□□□□□ -0.83
SHM2YLR058C ATP22P50273 684 aaPredicted RBP9.84□□□□□ -0.83
SHM2YLR058C RHO4Q00246 291 aa9.84□□□□□ -0.83
SHM2YLR058C NAM8Q00539 523 aaKnown RBP9.84□□□□□ -0.83
SHM2YLR058C SPR6Q01684 191 aa9.84□□□□□ -0.83
SHM2YLR058C SKI8Q02793 397 aaPredicted RBP9.84□□□□□ -0.83
SHM2YLR058C OAZ1Q02803 292 aa9.84□□□□□ -0.83
SHM2YLR058C YOL036WQ08206 761 aa9.84□□□□□ -0.83
SHM2YLR058C THP1Q08231 455 aa9.84□□□□□ -0.83
SHM2YLR058C YDR061WQ12298 539 aa9.84□□□□□ -0.83
SHM2YLR058C PSY3Q12318 242 aa9.84□□□□□ -0.83
SHM2YLR058C MHF2Q3E829 80 aa9.84□□□□□ -0.83
SHM2YLR058C PET112P33893 541 aa9.83□□□□□ -0.84
SHM2YLR058C RBG1P39729 369 aa9.83□□□□□ -0.84
SHM2YLR058C FAU1P40099 211 aa9.83□□□□□ -0.84
SHM2YLR058C QDR2P40474 542 aa9.83□□□□□ -0.84
SHM2YLR058C TED1P40533 473 aa9.83□□□□□ -0.84
SHM2YLR058C ASI2P53895 289 aa9.83□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms