RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YLR108CQ12259 485 aa2.3□□□□□ -2.04
PEP8YJL053W RRP12Q12754 1228 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W HOM3P10869 527 aa2.29□□□□□ -2.04
PEP8YJL053W MDH1P17505 334 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
PEP8YJL053W SNT1P25357 1226 aa2.29□□□□□ -2.04
PEP8YJL053W SDH3P33421 198 aa2.29□□□□□ -2.04
PEP8YJL053W PAD1P33751 242 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
PEP8YJL053W YBL059WP34224 193 aa2.29□□□□□ -2.04
PEP8YJL053W KKQ8P36004 724 aa2.29□□□□□ -2.04
PEP8YJL053W RIB5P38145 238 aa2.29□□□□□ -2.04
PEP8YJL053W MIX23P38162 196 aa2.29□□□□□ -2.04
PEP8YJL053W RRN10P38204 145 aa2.29□□□□□ -2.04
PEP8YJL053W SLM4P38247 162 aa2.29□□□□□ -2.04
PEP8YJL053W PCF11P39081 626 aaPredicted RBP2.29□□□□□ -2.04
PEP8YJL053W WWM1P43582 211 aaKnown RBP2.29□□□□□ -2.04
PEP8YJL053W ART5P53244 586 aaKnown RBP2.29□□□□□ -2.04
PEP8YJL053W YNR048WP53740 393 aa2.29□□□□□ -2.04
PEP8YJL053W KTR5P53966 522 aaPredicted RBP2.29□□□□□ -2.04
PEP8YJL053W CIK1Q01649 594 aa2.29□□□□□ -2.04
PEP8YJL053W GIP3Q03016 1276 aa2.29□□□□□ -2.04
PEP8YJL053W YMR181CQ03231 154 aa2.29□□□□□ -2.04
PEP8YJL053W TAF12Q03761 539 aa2.29□□□□□ -2.04
PEP8YJL053W YDR131CQ03899 556 aa2.29□□□□□ -2.04
PEP8YJL053W THP3Q12049 470 aaKnown RBP2.29□□□□□ -2.04
PEP8YJL053W VPS54Q12071 889 aa2.29□□□□□ -2.04
PEP8YJL053W BUG1Q12191 341 aa2.29□□□□□ -2.04
PEP8YJL053W RAD61Q99359 647 aa2.29□□□□□ -2.04
PEP8YJL053W TEF1P02994 458 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W SUP35P05453 685 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W SPT15P13393 240 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W SEC63P14906 663 aa2.28□□□□□ -2.04
PEP8YJL053W CPR2P23285 205 aa2.28□□□□□ -2.04
PEP8YJL053W URA7P28274 579 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W DEG1P31115 442 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W SMY1P32364 656 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W VMA8P32610 256 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W SOR1P35497 357 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W RFC3P38629 340 aa2.28□□□□□ -2.04
PEP8YJL053W NDT80P38830 627 aa2.28□□□□□ -2.04
PEP8YJL053W OST1P41543 476 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W ZIM17P42844 174 aa2.28□□□□□ -2.04
PEP8YJL053W FRE4P53746 719 aa2.28□□□□□ -2.04
PEP8YJL053W RSN1Q03516 953 aa2.28□□□□□ -2.04
PEP8YJL053W BET5Q03630 159 aa2.28□□□□□ -2.04
PEP8YJL053W ACL4Q03771 387 aa2.28□□□□□ -2.04
PEP8YJL053W SXM1Q04175 944 aaKnown RBP2.28□□□□□ -2.04
PEP8YJL053W AIM32Q04689 311 aa2.28□□□□□ -2.04
PEP8YJL053W PBA1Q05778 276 aa2.28□□□□□ -2.04
PEP8YJL053W MDM30Q05930 598 aa2.28□□□□□ -2.04
PEP8YJL053W SOR2Q07786 357 aa2.28□□□□□ -2.04
PEP8YJL053W SKI7Q08491 747 aaPredicted RBP2.28□□□□□ -2.04
PEP8YJL053W YPR022CQ12139 1133 aa2.28□□□□□ -2.04
PEP8YJL053W SMC6Q12749 1114 aa2.28□□□□□ -2.04
PEP8YJL053W MTR10Q99189 972 aa2.28□□□□□ -2.04
PEP8YJL053W ISN1Q99312 450 aa2.28□□□□□ -2.04
PEP8YJL053W ARO2P28777 376 aaKnown RBP2.27□□□□□ -2.05
PEP8YJL053W YIL067CP40514 678 aa2.27□□□□□ -2.05
PEP8YJL053W NCA3P46955 337 aa2.27□□□□□ -2.05
PEP8YJL053W YML6P51998 286 aa2.27□□□□□ -2.05
PEP8YJL053W RPT4P53549 437 aaKnown RBP2.27□□□□□ -2.05
PEP8YJL053W GOR1P53839 350 aa2.27□□□□□ -2.05
PEP8YJL053W PPM1Q04081 328 aa2.27□□□□□ -2.05
PEP8YJL053W MMR1Q06324 491 aa2.27□□□□□ -2.05
PEP8YJL053W AEP3Q12089 606 aa2.27□□□□□ -2.05
PEP8YJL053W TY1B-AO13527 1196 aaKnown RBP2.26□□□□□ -2.05
PEP8YJL053W CPR4P25334 318 aa2.26□□□□□ -2.05
PEP8YJL053W CTR86P25355 563 aa2.26□□□□□ -2.05
PEP8YJL053W MUD1P32605 298 aaKnown RBP2.26□□□□□ -2.05
PEP8YJL053W YBR056WP38081 501 aa2.26□□□□□ -2.05
PEP8YJL053W OLA1P38219 394 aaKnown RBP2.26□□□□□ -2.05
PEP8YJL053W PTH1P38876 190 aaKnown RBP2.26□□□□□ -2.05
PEP8YJL053W YAL037WP39728 267 aa2.26□□□□□ -2.05
PEP8YJL053W BUD27P43573 796 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
PEP8YJL053W PHO86P46956 311 aa2.26□□□□□ -2.05
PEP8YJL053W TCB2P48231 1178 aa2.26□□□□□ -2.05
PEP8YJL053W OCA2P53949 197 aa2.26□□□□□ -2.05
PEP8YJL053W GPI15P53961 229 aa2.26□□□□□ -2.05
PEP8YJL053W VPS9P54787 451 aa2.26□□□□□ -2.05
PEP8YJL053W HER2Q03557 464 aa2.26□□□□□ -2.05
PEP8YJL053W TSR1Q07381 788 aaKnown RBP2.26□□□□□ -2.05
PEP8YJL053W SNX3Q08826 162 aaKnown RBP2.26□□□□□ -2.05
PEP8YJL053W RUP1Q12242 671 aa2.26□□□□□ -2.05
PEP8YJL053W ORT1Q12375 292 aa2.26□□□□□ -2.05
PEP8YJL053W YER078W-AQ3E7A2 54 aa2.26□□□□□ -2.05
PEP8YJL053W CHS1P08004 1131 aa2.25□□□□□ -2.05
PEP8YJL053W SLY1P22213 666 aa2.25□□□□□ -2.05
PEP8YJL053W RAD57P25301 460 aa2.25□□□□□ -2.05
PEP8YJL053W ERV1P27882 189 aa2.25□□□□□ -2.05
PEP8YJL053W LTV1P34078 463 aa2.25□□□□□ -2.05
PEP8YJL053W PEX5P35056 612 aa2.25□□□□□ -2.05
PEP8YJL053W PRE5P40302 234 aaKnown RBP2.25□□□□□ -2.05
PEP8YJL053W VHS2P40463 436 aa2.25□□□□□ -2.05
PEP8YJL053W PRM5P40476 318 aa2.25□□□□□ -2.05
PEP8YJL053W YGR210CP42942 411 aa2.25□□□□□ -2.05
PEP8YJL053W TOM22P49334 152 aa2.25□□□□□ -2.05
PEP8YJL053W YGR111WP53265 400 aa2.25□□□□□ -2.05
PEP8YJL053W BTN2P53286 410 aa2.25□□□□□ -2.05
PEP8YJL053W TOF1P53840 1238 aa2.25□□□□□ -2.05
PEP8YJL053W YLR345WQ06137 509 aa2.25□□□□□ -2.05
PEP8YJL053W NDE2Q07500 545 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms