RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W CTI6Q08923 506 aa2.41□□□□□ -2.02
SHE9YDR393W SEC39Q12745 709 aa2.41□□□□□ -2.02
SHE9YDR393W YLR278CQ05854 1341 aa2.41□□□□□ -2.02
SHE9YDR393W CBP6P07253 162 aaPredicted RBP2.4□□□□□ -2.02
SHE9YDR393W PRP21P32524 280 aaPredicted RBP2.4□□□□□ -2.02
SHE9YDR393W MRX6P48564 524 aa2.4□□□□□ -2.02
SHE9YDR393W AZR1P50080 613 aa2.4□□□□□ -2.02
SHE9YDR393W RCN2Q12044 265 aa2.4□□□□□ -2.02
SHE9YDR393W DFR1P07807 211 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
SHE9YDR393W CBS1P14066 229 aa2.39□□□□□ -2.03
SHE9YDR393W AFG1P32317 509 aa2.39□□□□□ -2.03
SHE9YDR393W NIP100P33420 868 aa2.39□□□□□ -2.03
SHE9YDR393W BAT1P38891 393 aaKnown RBP2.39□□□□□ -2.03
SHE9YDR393W RHO5P53879 331 aaKnown RBP2.39□□□□□ -2.03
SHE9YDR393W SYF1Q04048 859 aaPredicted RBP2.39□□□□□ -2.03
SHE9YDR393W ORT1Q12375 292 aa2.39□□□□□ -2.03
SHE9YDR393W RPI1P23250 407 aaKnown RBP2.38□□□□□ -2.03
SHE9YDR393W RAD57P25301 460 aa2.38□□□□□ -2.03
SHE9YDR393W SPB1P25582 841 aaPredicted RBP2.38□□□□□ -2.03
SHE9YDR393W MCM10P32354 571 aa2.38□□□□□ -2.03
SHE9YDR393W DTR1P38125 572 aa2.38□□□□□ -2.03
SHE9YDR393W ATP22P50273 684 aaPredicted RBP2.38□□□□□ -2.03
SHE9YDR393W RMD9P53140 646 aaKnown RBP2.38□□□□□ -2.03
SHE9YDR393W MTQ1P53944 314 aa2.38□□□□□ -2.03
SHE9YDR393W RAD14P28519 371 aa2.37□□□□□ -2.03
SHE9YDR393W FMT1P32785 401 aa2.37□□□□□ -2.03
SHE9YDR393W OXA1P39952 402 aa2.37□□□□□ -2.03
SHE9YDR393W YGR149WP48236 432 aa2.37□□□□□ -2.03
SHE9YDR393W YIF1P53845 314 aaKnown RBP2.37□□□□□ -2.03
SHE9YDR393W NUP116Q02630 1113 aa2.37□□□□□ -2.03
SHE9YDR393W RMD5Q12508 421 aa2.37□□□□□ -2.03
SHE9YDR393W ENT1Q12518 454 aa2.37□□□□□ -2.03
SHE9YDR393W REV3P14284 1504 aa2.36□□□□□ -2.03
SHE9YDR393W IDH2P28241 369 aaKnown RBP2.36□□□□□ -2.03
SHE9YDR393W DPH2P32461 534 aa2.36□□□□□ -2.03
SHE9YDR393W ALD5P40047 520 aaKnown RBP2.36□□□□□ -2.03
SHE9YDR393W VMA13P41807 478 aaKnown RBP2.36□□□□□ -2.03
SHE9YDR393W BIR1P47134 954 aa2.36□□□□□ -2.03
SHE9YDR393W UPF3P48412 387 aaKnown RBP2.36□□□□□ -2.03
SHE9YDR393W YPS5P53057 165 aa2.36□□□□□ -2.03
SHE9YDR393W SMF3Q12078 473 aaPredicted RBP2.36□□□□□ -2.03
SHE9YDR393W RAX2Q12465 1220 aa2.36□□□□□ -2.03
SHE9YDR393W NOP4P37838 685 aaKnown RBP2.36□□□□□ -2.03
SHE9YDR393W RCK2P38623 610 aa2.36□□□□□ -2.03
SHE9YDR393W DOT5P40553 215 aa2.36□□□□□ -2.03
SHE9YDR393W RIF2Q06208 395 aa2.36□□□□□ -2.03
SHE9YDR393W SPT6P23615 1451 aaKnown RBP2.35□□□□□ -2.03
SHE9YDR393W BUD4P47136 1447 aa2.35□□□□□ -2.03
SHE9YDR393W PRR1P28708 518 aa2.35□□□□□ -2.03
SHE9YDR393W CST26P38226 397 aa2.35□□□□□ -2.03
SHE9YDR393W NOP16P40007 231 aaKnown RBP2.35□□□□□ -2.03
SHE9YDR393W VID27P40157 782 aa2.35□□□□□ -2.03
SHE9YDR393W BET5Q03630 159 aa2.35□□□□□ -2.03
SHE9YDR393W BCH1Q05029 724 aa2.35□□□□□ -2.03
SHE9YDR393W FOB1O13329 566 aa2.34□□□□□ -2.04
SHE9YDR393W SEM1O94742 89 aa2.34□□□□□ -2.04
SHE9YDR393W ILV5P06168 395 aaKnown RBP2.34□□□□□ -2.04
SHE9YDR393W MSI1P13712 422 aa2.34□□□□□ -2.04
SHE9YDR393W OM14P38325 134 aa2.34□□□□□ -2.04
SHE9YDR393W MET28P40573 187 aa2.34□□□□□ -2.04
SHE9YDR393W DLD2P46681 530 aaKnown RBP2.34□□□□□ -2.04
SHE9YDR393W YET2Q04210 160 aa2.34□□□□□ -2.04
SHE9YDR393W MDS3P53094 1487 aa2.33□□□□□ -2.04
SHE9YDR393W GFD2P25370 566 aaKnown RBP2.33□□□□□ -2.04
SHE9YDR393W IME2P32581 645 aa2.33□□□□□ -2.04
SHE9YDR393W YHR054CP38780 354 aa2.33□□□□□ -2.04
SHE9YDR393W SAS2P40963 338 aa2.33□□□□□ -2.04
SHE9YDR393W YFR057WP43625 151 aa2.33□□□□□ -2.04
SHE9YDR393W HMS2P47175 358 aa2.33□□□□□ -2.04
SHE9YDR393W BNS1P50084 137 aa2.33□□□□□ -2.04
SHE9YDR393W TWF1P53250 332 aa2.33□□□□□ -2.04
SHE9YDR393W DIA1P54005 336 aa2.33□□□□□ -2.04
SHE9YDR393W HSL1P34244 1518 aa2.33□□□□□ -2.04
SHE9YDR393W TAF2P23255 1407 aa2.32□□□□□ -2.04
SHE9YDR393W MAS2P11914 482 aa2.32□□□□□ -2.04
SHE9YDR393W SEC63P14906 663 aa2.32□□□□□ -2.04
SHE9YDR393W RPB5P20434 215 aa2.32□□□□□ -2.04
SHE9YDR393W SBE22P38814 852 aa2.32□□□□□ -2.04
SHE9YDR393W TPS1Q00764 495 aaKnown RBP2.32□□□□□ -2.04
SHE9YDR393W PIN3Q06449 215 aa2.32□□□□□ -2.04
SHE9YDR393W SKI7Q08491 747 aaPredicted RBP2.32□□□□□ -2.04
SHE9YDR393W YDR056CQ12025 205 aa2.32□□□□□ -2.04
SHE9YDR393W OLE1P21147 510 aaKnown RBP2.31□□□□□ -2.04
SHE9YDR393W CDC50P25656 391 aa2.31□□□□□ -2.04
SHE9YDR393W SEC66P33754 206 aa2.31□□□□□ -2.04
SHE9YDR393W YEL057CP39983 233 aa2.31□□□□□ -2.04
SHE9YDR393W YIL029CP40538 142 aa2.31□□□□□ -2.04
SHE9YDR393W CMS1Q07897 291 aaKnown RBP2.31□□□□□ -2.04
SHE9YDR393W BPT1P14772 1559 aa2.3□□□□□ -2.04
SHE9YDR393W YML133CQ03099 1374 aa2.3□□□□□ -2.04
SHE9YDR393W YLL067CQ07888 1374 aa2.3□□□□□ -2.04
SHE9YDR393W YLL066CQ99208 1374 aa2.3□□□□□ -2.04
SHE9YDR393W AAC3P18238 307 aa2.3□□□□□ -2.04
SHE9YDR393W ATG18P43601 500 aa2.3□□□□□ -2.04
SHE9YDR393W YGL262WP53054 175 aa2.3□□□□□ -2.04
SHE9YDR393W VPS75P53853 264 aa2.3□□□□□ -2.04
SHE9YDR393W GCN4P03069 281 aa2.29□□□□□ -2.04
SHE9YDR393W SPO12P17123 173 aa2.29□□□□□ -2.04
SHE9YDR393W CTR86P25355 563 aa2.29□□□□□ -2.04
SHE9YDR393W GPI18P38211 433 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 83.5 ms