RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C RIM20Q12033 661 aa2.26□□□□□ -2.05
ASM4YDL088C IZH2Q12442 317 aa2.26□□□□□ -2.05
ASM4YDL088C MET8P15807 274 aa2.25□□□□□ -2.05
ASM4YDL088C SPO22P40511 975 aa2.25□□□□□ -2.05
ASM4YDL088C SAS2P40963 338 aa2.25□□□□□ -2.05
ASM4YDL088C RHO5P53879 331 aaKnown RBP2.25□□□□□ -2.05
ASM4YDL088C MTQ1P53944 314 aa2.25□□□□□ -2.05
ASM4YDL088C LIP2Q06005 328 aa2.25□□□□□ -2.05
ASM4YDL088C YPQ1Q12010 308 aa2.25□□□□□ -2.05
ASM4YDL088C ORT1Q12375 292 aa2.25□□□□□ -2.05
ASM4YDL088C PSK1P31374 1356 aa2.24□□□□□ -2.05
ASM4YDL088C GPH1P06738 902 aaKnown RBP2.24□□□□□ -2.05
ASM4YDL088C SPO7P18410 259 aa2.24□□□□□ -2.05
ASM4YDL088C CLN1P20437 546 aa2.24□□□□□ -2.05
ASM4YDL088C PPH22P23595 377 aa2.24□□□□□ -2.05
ASM4YDL088C NUP116Q02630 1113 aa2.24□□□□□ -2.05
ASM4YDL088C ECM11Q04110 302 aa2.24□□□□□ -2.05
ASM4YDL088C PLP2Q12017 286 aa2.24□□□□□ -2.05
ASM4YDL088C GPI10P30777 616 aa2.23□□□□□ -2.05
ASM4YDL088C IES6P32617 166 aa2.23□□□□□ -2.05
ASM4YDL088C YKL097CP34245 136 aa2.23□□□□□ -2.05
ASM4YDL088C SYF1Q04048 859 aaPredicted RBP2.23□□□□□ -2.05
ASM4YDL088C NDE2Q07500 545 aa2.23□□□□□ -2.05
ASM4YDL088C SPT10P35208 640 aa2.23□□□□□ -2.05
ASM4YDL088C YIL029CP40538 142 aa2.23□□□□□ -2.05
ASM4YDL088C MKC7P53379 596 aa2.23□□□□□ -2.05
ASM4YDL088C AHC1Q12433 566 aa2.23□□□□□ -2.05
ASM4YDL088C RTP1Q12751 981 aa2.23□□□□□ -2.05
ASM4YDL088C RPL3P14126 387 aaKnown RBP2.22□□□□□ -2.05
ASM4YDL088C AAT2P23542 418 aaKnown RBP2.22□□□□□ -2.05
ASM4YDL088C ARA1P38115 344 aa2.22□□□□□ -2.05
ASM4YDL088C MRPS9P38120 278 aa2.22□□□□□ -2.05
ASM4YDL088C CHK1P38147 527 aa2.22□□□□□ -2.05
ASM4YDL088C RTC2P38279 296 aa2.22□□□□□ -2.05
ASM4YDL088C PCF11P39081 626 aaPredicted RBP2.22□□□□□ -2.05
ASM4YDL088C VMA13P41807 478 aaKnown RBP2.22□□□□□ -2.05
ASM4YDL088C PHB2P50085 310 aa2.22□□□□□ -2.05
ASM4YDL088C RQC1Q05468 723 aaKnown RBP2.22□□□□□ -2.05
ASM4YDL088C JID1Q12350 301 aa2.22□□□□□ -2.05
ASM4YDL088C RIP1P08067 215 aa2.21□□□□□ -2.06
ASM4YDL088C HIR2P32480 875 aa2.21□□□□□ -2.06
ASM4YDL088C TIM17P39515 158 aa2.21□□□□□ -2.06
ASM4YDL088C SEO1P39709 593 aa2.21□□□□□ -2.06
ASM4YDL088C JLP2P40206 208 aa2.21□□□□□ -2.06
ASM4YDL088C MET18P40469 1032 aa2.21□□□□□ -2.06
ASM4YDL088C YFR057WP43625 151 aa2.21□□□□□ -2.06
ASM4YDL088C YJR011CP47086 261 aaPredicted RBP2.21□□□□□ -2.06
ASM4YDL088C IES4Q08561 116 aa2.21□□□□□ -2.06
ASM4YDL088C ARG3P05150 338 aa2.2□□□□□ -2.06
ASM4YDL088C OTU2P38747 307 aaKnown RBP2.2□□□□□ -2.06
ASM4YDL088C ARF3P40994 183 aaRIP-Chip data2.2□□□□□ -2.06not detected
ASM4YDL088C BIR1P47134 954 aa2.2□□□□□ -2.06
ASM4YDL088C MNP1P53163 194 aaPredicted RBP2.2□□□□□ -2.06
ASM4YDL088C OAZ1Q02803 292 aa2.2□□□□□ -2.06
ASM4YDL088C BCH1Q05029 724 aa2.2□□□□□ -2.06
ASM4YDL088C SIL1Q08199 421 aa2.2□□□□□ -2.06
ASM4YDL088C SKI7Q08491 747 aaPredicted RBP2.2□□□□□ -2.06
ASM4YDL088C RMD5Q12508 421 aa2.2□□□□□ -2.06
ASM4YDL088C ILV5P06168 395 aaKnown RBP2.19□□□□□ -2.06
ASM4YDL088C PRB1P09232 635 aa2.19□□□□□ -2.06
ASM4YDL088C RAD57P25301 460 aa2.19□□□□□ -2.06
ASM4YDL088C PRR1P28708 518 aa2.19□□□□□ -2.06
ASM4YDL088C OXA1P39952 402 aa2.19□□□□□ -2.06
ASM4YDL088C YER186CP40101 306 aa2.19□□□□□ -2.06
ASM4YDL088C RPS0BP46654 252 aaKnown RBP2.19□□□□□ -2.06
ASM4YDL088C SFH5P47008 294 aa2.19□□□□□ -2.06
ASM4YDL088C JJJ1P53863 590 aa2.19□□□□□ -2.06
ASM4YDL088C MRPS16Q02608 121 aa2.19□□□□□ -2.06
ASM4YDL088C RIF2Q06208 395 aa2.19□□□□□ -2.06
ASM4YDL088C SMF3Q12078 473 aaPredicted RBP2.19□□□□□ -2.06
ASM4YDL088C SEC63P14906 663 aa2.18□□□□□ -2.06
ASM4YDL088C SPO12P17123 173 aa2.18□□□□□ -2.06
ASM4YDL088C HXT3P32466 567 aaKnown RBP2.18□□□□□ -2.06
ASM4YDL088C FMS1P50264 508 aa2.18□□□□□ -2.06
ASM4YDL088C TIM10P87108 93 aa2.18□□□□□ -2.06
ASM4YDL088C AIM32Q04689 311 aa2.18□□□□□ -2.06
ASM4YDL088C VTA1Q06263 330 aa2.18□□□□□ -2.06
ASM4YDL088C YPR091CQ06833 770 aa2.18□□□□□ -2.06
ASM4YDL088C HSP42Q12329 375 aa2.18□□□□□ -2.06
ASM4YDL088C COX4P04037 155 aa2.17□□□□□ -2.06
ASM4YDL088C MSI1P13712 422 aa2.17□□□□□ -2.06
ASM4YDL088C SRV2P17555 526 aaKnown RBP2.17□□□□□ -2.06
ASM4YDL088C CTR86P25355 563 aa2.17□□□□□ -2.06
ASM4YDL088C RHB1P25378 209 aa2.17□□□□□ -2.06
ASM4YDL088C SIN4P32259 974 aa2.17□□□□□ -2.06
ASM4YDL088C COX14P39103 70 aa2.17□□□□□ -2.06
ASM4YDL088C CRH1P53301 507 aa2.17□□□□□ -2.06
ASM4YDL088C CCH1P50077 2039 aa2.17□□□□□ -2.06
ASM4YDL088C BEM1P29366 551 aa2.16□□□□□ -2.06
ASM4YDL088C SBE22P38814 852 aa2.16□□□□□ -2.06
ASM4YDL088C GPI15P53961 229 aa2.16□□□□□ -2.06
ASM4YDL088C SNU66Q12420 587 aaPredicted RBP2.16□□□□□ -2.06
ASM4YDL088C SMY1P32364 656 aaKnown RBP2.15□□□□□ -2.06
ASM4YDL088C RFC3P38629 340 aa2.15□□□□□ -2.06
ASM4YDL088C CHS6P40955 746 aa2.15□□□□□ -2.06
ASM4YDL088C FLC3P53121 802 aa2.15□□□□□ -2.06
ASM4YDL088C MRM2P53123 320 aa2.15□□□□□ -2.06
ASM4YDL088C GIP3Q03016 1276 aa2.15□□□□□ -2.06
ASM4YDL088C IMH1Q06704 911 aaKnown RBP2.15□□□□□ -2.06
ASM4YDL088C DNL4Q08387 944 aaPredicted RBP2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms