RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 CELF3Q5SZQ8 465 aaKnown RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 KCNV1Q6PIU1 500 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 B3GNT9Q6UX72 402 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 NLRX1Q86UT6 975 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 U2AF1L4Q8WU68 220 aaKnown RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 EMID1Q96A84 441 aaPredicted RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 SENP7Q9BQF6 1050 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 TMEM60Q9H2L4 133 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 KCNMB3Q9NPA1 279 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 Q9Y3F1 56 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 PCDHB6Q9Y5E3 794 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 SCN10AQ9Y5Y9 1956 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 IPO5O00410 1097 aaKnown RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 NKRFO15226 690 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRIO-224ENST00000620511 DYNC1LI2O43237 492 aaPredicted RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 SORBS3O60504 671 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 MSCO60682 206 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 FARP2O94887 1054 aaPredicted RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 BRD1O95696 1058 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 GGPS1O95749 300 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 ZSCAN22P10073 491 aaPredicted RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 RARBP10826 455 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 ZNF76P36508 570 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 LRRC41Q15345 812 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 HSDL1Q3SXM5 330 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 TLK2Q86UE8 772 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 SLC5A5Q92911 643 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 CDHR1Q96JP9 859 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 MTMR9Q96QG7 549 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 XPNPEP3Q9NQH7 507 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 PKD2L1Q9P0L9 805 aa10.89□□□□□ -0.67
TRIO-224ENST00000620511 DDX25Q9UHL0 483 aaKnown RBP10.89□□□□□ -0.67
TRIO-224ENST00000620511 A6NJR5 290 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 PSMD10O75832 226 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 BAG4O95429 457 aaKnown RBP10.88□□□□□ -0.67
TRIO-224ENST00000620511 CCNE2O96020 404 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 GH1P01241 217 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 HOXD8P13378 290 aaPredicted RBP10.88□□□□□ -0.67
TRIO-224ENST00000620511 GCFC2P16383 781 aaKnown RBP10.88□□□□□ -0.67
TRIO-224ENST00000620511 EN2P19622 333 aaPredicted RBP10.88□□□□□ -0.67
TRIO-224ENST00000620511 ATP2B1P20020 1258 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 CST5P28325 142 aaPredicted RBP10.88□□□□□ -0.67
TRIO-224ENST00000620511 BEX3Q00994 111 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 SETQ01105 290 aaPredicted RBP10.88□□□□□ -0.67
TRIO-224ENST00000620511 ZNF174Q15697 407 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 TTC38Q5R3I4 469 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 METTL7BQ6UX53 244 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 CYFIP1Q7L576 1253 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 BRAPQ7Z569 592 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 UBE2Q1Q7Z7E8 422 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 AFG1LQ8WV93 481 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRIO-224ENST00000620511 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
TRIO-224ENST00000620511 NFASCO94856 1347 aa10.88□□□□□ -0.67
TRIO-224ENST00000620511 MYH9P35579 1960 aaKnown RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 GSTTP1A0A1W2PQM5 241 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 F13A1P00488 732 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 MCM7P33993 719 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 SPIRE1Q08AE8 756 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 GNL2Q13823 731 aaKnown RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 NEDD9Q14511 834 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 FSCN1Q16658 493 aaKnown RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 L1TD1Q5T7N2 865 aaKnown RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 FOXD4L5Q5VV16 416 aaPredicted RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 DHX37Q8IY37 1157 aaKnown RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 OR6J1Q8NGC5 347 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 PPTC7Q8NI37 304 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 DIS3LQ8TF46 1054 aaKnown RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 FOXD4L4Q8WXT5 416 aaPredicted RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 GPR20Q99678 358 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 ZNF577Q9BSK1 485 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 VAV3Q9UKW4 847 aa10.87□□□□□ -0.67
TRIO-224ENST00000620511 TNRC18O15417 2968 aaPredicted RBP10.87□□□□□ -0.67
TRIO-224ENST00000620511 TBX3O15119 743 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 NEMFO60524 1076 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 ATG7O95352 703 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
TRIO-224ENST00000620511 MMP3P08254 477 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 C6orf222P0C671 652 aaPredicted RBP10.86□□□□□ -0.67
TRIO-224ENST00000620511 COL6A1P12109 1028 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 PDIA4P13667 645 aaKnown RBP10.86□□□□□ -0.67
TRIO-224ENST00000620511 LAMC2Q13753 1193 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 KCNA10Q16322 511 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 IL17AQ16552 155 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 RILPL1Q5EBL4 403 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 KAT2BQ92831 832 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 CHAMP1Q96JM3 812 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 PCYT2Q99447 389 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 RIT2Q99578 217 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 ZSCAN16Q9H4T2 348 aaPredicted RBP10.86□□□□□ -0.67
TRIO-224ENST00000620511 CLIC4Q9Y696 253 aa10.86□□□□□ -0.67
TRIO-224ENST00000620511 TRIP12Q14669 1992 aaPredicted RBP10.85□□□□□ -0.67
TRIO-224ENST00000620511 ALPK3Q96L96 1907 aa10.85□□□□□ -0.67
TRIO-224ENST00000620511 GRIN2DO15399 1336 aa10.85□□□□□ -0.67
TRIO-224ENST00000620511 EML1O00423 815 aa10.85□□□□□ -0.67
TRIO-224ENST00000620511 ACTR2P61160 394 aa10.85□□□□□ -0.67
TRIO-224ENST00000620511 PTGDRQ13258 359 aa10.85□□□□□ -0.67
TRIO-224ENST00000620511 ORC2Q13416 577 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms