RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 NAA16Q6N069 864 aaPredicted RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 CCDC84Q86UT8 332 aaPredicted RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 OR13H1Q8NG92 308 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 ARHGAP45Q92619 1136 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 ASIC4Q96FT7 647 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 SPATA32Q96LK8 384 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 P2RX7Q99572 595 aaKnown RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 LBHD1Q9BQE6 289 aaPredicted RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 RASSF4Q9H2L5 321 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 SH2B1Q9NRF2 756 aaPredicted RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 HMG20BQ9P0W2 317 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 CCDC39Q9UFE4 941 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 PRKAG2Q9UGJ0 569 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 BRPF3Q9ULD4 1205 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 STXBP5LQ9Y2K9 1186 aa6.78□□□□□ -1.32
DNMT1-220ENST00000589351 COL2A1P02458 1487 aaPredicted RBP6.78□□□□□ -1.32
DNMT1-220ENST00000589351 TRIOBPQ9H2D6 2365 aa6.77□□□□□ -1.32
DNMT1-220ENST00000589351 FAM196BA6NMK8 535 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L15C9J2P7 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L13C9JLJ4 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L12C9JPN9 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L11C9JVI0 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L21D6R901 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L18D6R9N7 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L22D6RA61 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L17D6RBQ6 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L19D6RCP7 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L20D6RJB6 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
DNMT1-220ENST00000589351 MSCO60682 206 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 GNAI2P04899 355 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 SYN1P17600 705 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 MAGEA10P43363 369 aaPredicted RBP6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP14P54578 494 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 ERVK-24P63145 666 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 USP17L24Q0WX57 530 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 HYAL2Q12891 473 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
DNMT1-220ENST00000589351 MTX1Q13505 466 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 COL19A1Q14993 1142 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 MSMPQ1L6U9 139 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 COX20Q5RI15 118 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 TTC39AQ5SRH9 613 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 MFSD14CQ5VZR4 134 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 FAM117BQ6P1L5 589 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 PLEKHH3Q7Z736 793 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 DIS3LQ8TF46 1054 aaKnown RBP6.77□□□□□ -1.33
DNMT1-220ENST00000589351 EDC3Q96F86 508 aaKnown RBP6.77□□□□□ -1.33
DNMT1-220ENST00000589351 CABP5Q9NP86 173 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 AATFQ9NY61 560 aaKnown RBP eCLIP6.77□□□□□ -1.33
DNMT1-220ENST00000589351 CEP290O15078 2479 aa6.77□□□□□ -1.33
DNMT1-220ENST00000589351 F13BP05160 661 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 ATP2B2Q01814 1243 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 CACNB2Q08289 660 aaPredicted RBP6.76□□□□□ -1.33
DNMT1-220ENST00000589351 MAP3K21Q5TCX8 1036 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 WDR78Q5VTH9 848 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 ANKRD34AQ69YU3 496 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 GPR142Q7Z601 462 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 SH3RF3Q8TEJ3 882 aaPredicted RBP6.76□□□□□ -1.33
DNMT1-220ENST00000589351 TGFBRAP1Q8WUH2 860 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 TRIB2Q92519 343 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 SPACA7Q96KW9 195 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 MEIS3Q99687 375 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 PAGR1Q9BTK6 254 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 GPR108Q9NPR9 543 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.76□□□□□ -1.33
DNMT1-220ENST00000589351 RBPJLQ9UBG7 517 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 USTQ9Y2C2 406 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 HIF3AQ9Y2N7 669 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 RABGAP1Q9Y3P9 1069 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 RFX7Q2KHR2 1363 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 PTPRFP10586 1907 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 PHIPQ8WWQ0 1821 aa6.76□□□□□ -1.33
DNMT1-220ENST00000589351 FOSL1P15407 271 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 ITGB5P18084 799 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
DNMT1-220ENST00000589351 CNGA1P29973 690 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 USP5P45974 858 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 FAM109BQ6ICB4 259 aaPredicted RBP6.75□□□□□ -1.33
DNMT1-220ENST00000589351 TMED8Q6PL24 325 aaPredicted RBP6.75□□□□□ -1.33
DNMT1-220ENST00000589351 TTC6Q86TZ1 520 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 MAPKAPK5Q8IW41 473 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 ETFBKMTQ8IXQ9 262 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 TRMT2AQ8IZ69 625 aaKnown RBP6.75□□□□□ -1.33
DNMT1-220ENST00000589351 SHISA5Q8N114 240 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 FBXL6Q8N531 539 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 ARRDC4Q8NCT1 418 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 FEZ1Q99689 392 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 APBA2Q99767 749 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 SENP6Q9GZR1 1112 aaPredicted RBP6.75□□□□□ -1.33
DNMT1-220ENST00000589351 MTMR10Q9NXD2 777 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 SLC5A4Q9NY91 659 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 PALD1Q9ULE6 856 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 ZBTB21Q9ULJ3 1066 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 DOCK3Q8IZD9 2030 aa6.75□□□□□ -1.33
DNMT1-220ENST00000589351 ATAD5Q96QE3 1844 aa6.74□□□□□ -1.33
DNMT1-220ENST00000589351 SLC15A5A6NIM6 579 aa6.74□□□□□ -1.33
DNMT1-220ENST00000589351 STRNO43815 780 aa6.74□□□□□ -1.33
DNMT1-220ENST00000589351 PRNPP04156 253 aa6.74□□□□□ -1.33
DNMT1-220ENST00000589351 COL6A1P12109 1028 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms