RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 USP4Q13107 963 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 ALX1Q15699 326 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 GNASQ5JWF2 1037 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 SYDE2Q5VT97 1194 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 NOL8Q76FK4 1167 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 ANKRD33Q7Z3H0 272 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 FAM160B2Q86V87 743 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 MSL3Q8N5Y2 521 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 USP38Q8NB14 1042 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 CLEC4DQ8WXI8 215 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 TBC1D5Q92609 795 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 SEMA6BQ9H3T3 888 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 ABHD16BQ9H3Z7 469 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 VRTNQ9H8Y1 702 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 ZNF287Q9HBT7 754 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 FBXO40Q9UH90 709 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 TAF6LQ9Y6J9 622 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 ICAM1P05362 532 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 SDSP20132 328 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 SCTRP47872 440 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 LRRFIP1Q32MZ4 808 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 CWC27Q6UX04 472 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 CHURC1Q8WUH1 139 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 VTI1AQ96AJ9 217 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 TSEN34Q9BSV6 310 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 KLF16Q9BXK1 252 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 TRPV6Q9H1D0 765 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 PRDM6Q9NQX0 595 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 CXXC1Q9P0U4 656 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 COL20A1Q9P218 1284 aa10.86□□□□□ -0.67
NPLOC4-210ENST00000572824 ZMYM6O95789 1325 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 A0A0U1RQG5 324 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 PTPDC1A2A3K4 754 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 ARVCFO00192 962 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 DYNC1LI2O43237 492 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 B4GALT4O60513 344 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 LILRA1O75019 489 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 ARIH2O95376 493 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 CD4P01730 458 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 TOP1P11387 765 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 GSPT1P15170 499 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 CALML3P27482 149 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 ALDH5A1P51649 535 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 NUCB1Q02818 461 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 ZNF543Q08ER8 600 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 COL9A3Q14050 684 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 GRIN2CQ14957 1233 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 USH1GQ495M9 461 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 TMEM240Q5SV17 173 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 AKNAD1Q5T1N1 836 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 BTNL9Q6UXG8 535 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 CHD1LQ86WJ1 897 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 GLT1D1Q96MS3 346 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 WNT8AQ9H1J5 351 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 NOD1Q9Y239 953 aa10.85□□□□□ -0.67
NPLOC4-210ENST00000572824 DCDC2CA8MYV0 355 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 B4E1Z4 1266 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 PLA2G6O60733 806 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 TIMP1P01033 207 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 SNHG28P0DPA3 235 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 CCL23P55773 120 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 FSCN1Q16658 493 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 SKAP1Q86WV1 359 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 SCLYQ96I15 445 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 SENP2Q9HC62 589 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 TRMT13Q9NUP7 481 aaKnown RBP10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 COL4A4P53420 1690 aaPredicted RBP10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 ELP1O95163 1332 aa10.84□□□□□ -0.67
NPLOC4-210ENST00000572824 CYP2C9P11712 490 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 MYOGP15173 224 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 RPS6P62753 249 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 SMAD3P84022 425 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 MFSD5Q6N075 450 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 KIAA1211Q6ZU35 1233 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 SLC43A3Q8NBI5 491 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 MAFAQ8NHW3 353 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 MORC4Q8TE76 937 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 NUP133Q8WUM0 1156 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 HPS1Q92902 700 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 PBX4Q9BYU1 374 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 TCP11L1Q9NUJ3 509 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 MUC3AQ02505 3323 aa10.83□□□□□ -0.68
NPLOC4-210ENST00000572824 ASB14A6NK59 587 aa10.82□□□□□ -0.68
NPLOC4-210ENST00000572824 SORBS3O60504 671 aa10.82□□□□□ -0.68
NPLOC4-210ENST00000572824 RABGGTBP53611 331 aa10.82□□□□□ -0.68
NPLOC4-210ENST00000572824 WDR4P57081 412 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-210ENST00000572824 NKX3-2P78367 333 aa10.82□□□□□ -0.68
NPLOC4-210ENST00000572824 ITGA7Q13683 1181 aa10.82□□□□□ -0.68
NPLOC4-210ENST00000572824 CDC37Q16543 378 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms