RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CACNB2Q08289 660 aaPredicted RBP7.17□□□□□ -1.26
LINC00254-201ENST00000563416 PAK1Q13153 545 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 MIB1Q86YT6 1006 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 TMEFF1Q8IYR6 380 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 KISS1RQ969F8 398 aaPredicted RBP7.17□□□□□ -1.26
LINC00254-201ENST00000563416 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 CDIP1Q9H305 208 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 SMOC1Q9H4F8 434 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 SLC6A20Q9NP91 592 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 PLA2G2DQ9UNK4 145 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 PTCH2Q9Y6C5 1203 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 ERCC6L2Q5T890 1561 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 ATF2P15336 505 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 LIMS1P48059 325 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 AFF3P51826 1226 aaKnown RBP7.16□□□□□ -1.26
LINC00254-201ENST00000563416 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 FZD5Q13467 585 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 B3GNT8Q7Z7M8 397 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 SIAH1Q8IUQ4 282 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 TRIM48Q8IWZ4 208 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 FAM126BQ8IXS8 530 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 LILRB2Q8N423 598 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 PWWP2AQ96N64 755 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 MYOTQ9UBF9 498 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 PPARGC1AQ9UBK2 798 aaKnown RBP7.16□□□□□ -1.26
LINC00254-201ENST00000563416 ASXL2Q76L83 1435 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 IQGAP2Q13576 1575 aa7.16□□□□□ -1.26
LINC00254-201ENST00000563416 TADA3O75528 432 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 ZSCAN22P10073 491 aaPredicted RBP7.15□□□□□ -1.26
LINC00254-201ENST00000563416 CYP2C8P10632 490 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 MC3RP41968 323 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 OTOP3Q7RTS5 596 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 C1QL4Q86Z23 238 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 SMARCC2Q8TAQ2 1214 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 KCNJ15Q99712 375 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 NDOR1Q9UHB4 597 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 SFMBT1Q9UHJ3 866 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 PMF1-BGLAPU3KQ54 211 aa7.15□□□□□ -1.26
LINC00254-201ENST00000563416 GSTA4O15217 222 aa7.14□□□□□ -1.27
LINC00254-201ENST00000563416 CAP1Q01518 475 aa7.14□□□□□ -1.27
LINC00254-201ENST00000563416 CARMIL1Q5VZK9 1371 aa7.14□□□□□ -1.27
LINC00254-201ENST00000563416 PANK1Q8TE04 598 aa7.14□□□□□ -1.27
LINC00254-201ENST00000563416 DACT3Q96B18 629 aaPredicted RBP7.14□□□□□ -1.27
LINC00254-201ENST00000563416 KIAA0586Q9BVV6 1533 aa7.14□□□□□ -1.27
LINC00254-201ENST00000563416 MRPL4Q9BYD3 311 aaKnown RBP7.14□□□□□ -1.27
LINC00254-201ENST00000563416 IPPKQ9H8X2 491 aa7.14□□□□□ -1.27
LINC00254-201ENST00000563416 EPB41L4AQ9HCS5 686 aaPredicted RBP7.14□□□□□ -1.27
LINC00254-201ENST00000563416 RAPGEF2Q9Y4G8 1499 aa7.14□□□□□ -1.27
LINC00254-201ENST00000563416 KIF21BO75037 1637 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 PRXQ9BXM0 1461 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 EEA1Q15075 1411 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 TCRBV5S2A0A599 114 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 NKX3-2P78367 333 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 ST5P78524 1137 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 TRIM61Q5EBN2 209 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 CD300LDQ6UXZ3 194 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 TOE1Q96GM8 510 aaKnown RBP7.13□□□□□ -1.27
LINC00254-201ENST00000563416 DTLQ9NZJ0 730 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 ASH2LQ9UBL3 628 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 PCDHA8Q9Y5H6 950 aa7.13□□□□□ -1.27
LINC00254-201ENST00000563416 ARVCFO00192 962 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 WNT9AO14904 365 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 CRTAMO95727 393 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 FAM47CQ5HY64 1035 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 ZC3H7AQ8IWR0 971 aaKnown RBP7.12□□□□□ -1.27
LINC00254-201ENST00000563416 ARRDC4Q8NCT1 418 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 UHMK1Q8TAS1 419 aaKnown RBP7.12□□□□□ -1.27
LINC00254-201ENST00000563416 SH3TC2Q8TF17 1288 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 FBXW5Q969U6 566 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 MAGEB10Q96LZ2 347 aaPredicted RBP7.12□□□□□ -1.27
LINC00254-201ENST00000563416 SLC52A2Q9HAB3 445 aa7.12□□□□□ -1.27
LINC00254-201ENST00000563416 PLD2O14939 933 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 SLC27A2O14975 620 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 C8BP07358 591 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 COL6A2P12110 1019 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 GSTCDQ8NEC7 633 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 TTLL11Q8NHH1 800 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 FNIP1Q8TF40 1166 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 PIF1Q9H611 641 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 NCOA5Q9HCD5 579 aaKnown RBP7.11□□□□□ -1.27
LINC00254-201ENST00000563416 CATSPERZQ9NTU4 200 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 DSEQ9UL01 958 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 PCDHA9Q9Y5H5 950 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 UGGT2Q9NYU1 1516 aa7.11□□□□□ -1.27
LINC00254-201ENST00000563416 SMARCA5O60264 1052 aaPredicted RBP7.1□□□□□ -1.27
LINC00254-201ENST00000563416 HTRA3P83110 453 aa7.1□□□□□ -1.27
LINC00254-201ENST00000563416 HABP4Q5JVS0 413 aaKnown RBP7.1□□□□□ -1.27
LINC00254-201ENST00000563416 EP400NLQ6ZTU2 488 aa7.1□□□□□ -1.27
LINC00254-201ENST00000563416 C16orf59Q7L2K0 433 aa7.1□□□□□ -1.27
LINC00254-201ENST00000563416 LINC01356Q8N9X3 169 aa7.1□□□□□ -1.27
LINC00254-201ENST00000563416 PCDH19Q8TAB3 1148 aa7.1□□□□□ -1.27
LINC00254-201ENST00000563416 ZBTB8AQ96BR9 441 aa7.1□□□□□ -1.27
LINC00254-201ENST00000563416 TMEM260Q9NX78 707 aa7.1□□□□□ -1.27
LINC00254-201ENST00000563416 KIAA0556O60303 1618 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.09□□□□□ -1.27
LINC00254-201ENST00000563416 KCNQ2O43526 872 aa7.09□□□□□ -1.27
LINC00254-201ENST00000563416 IGSF3O75054 1194 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms